RNA–Protein interactions for RNA: ENST00000554170.1

XRCC3-206, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-206ENST00000554170 GLYATL1Q969I3 302 aa12.71□□□□□ -0.37
XRCC3-206ENST00000554170 PRR11Q96HE9 360 aaPredicted RBP12.71□□□□□ -0.37
XRCC3-206ENST00000554170 RUNDC3BQ96NL0 473 aa12.71□□□□□ -0.37
XRCC3-206ENST00000554170 C19orf43Q9BQ61 176 aa12.71□□□□□ -0.37
XRCC3-206ENST00000554170 SUDS3Q9H7L9 328 aaPredicted RBP12.71□□□□□ -0.37
XRCC3-206ENST00000554170 EIF2B3Q9NR50 452 aaKnown RBP12.71□□□□□ -0.37
XRCC3-206ENST00000554170 VPS18Q9P253 973 aa12.71□□□□□ -0.37
XRCC3-206ENST00000554170 PNMA8BQ9ULN7 279 aaPredicted RBP12.71□□□□□ -0.37
XRCC3-206ENST00000554170 SUFUQ9UMX1 484 aa12.71□□□□□ -0.37
XRCC3-206ENST00000554170 TMEM98Q9Y2Y6 226 aa12.71□□□□□ -0.37
XRCC3-206ENST00000554170 ENTPD2Q9Y5L3 495 aa12.71□□□□□ -0.37
XRCC3-206ENST00000554170 CPED1A4D0V7 1026 aa12.7□□□□□ -0.38
XRCC3-206ENST00000554170 LMO7DNF2Z398 122 aa12.7□□□□□ -0.38
XRCC3-206ENST00000554170 YY2O15391 372 aa12.7□□□□□ -0.38
XRCC3-206ENST00000554170 TCEA3O75764 348 aa12.7□□□□□ -0.38
XRCC3-206ENST00000554170 WISP1O95388 367 aa12.7□□□□□ -0.38
XRCC3-206ENST00000554170 ECEL1O95672 775 aa12.7□□□□□ -0.38
XRCC3-206ENST00000554170 GNPDA1P46926 289 aa12.7□□□□□ -0.38
XRCC3-206ENST00000554170 POLD2P49005 469 aa12.7□□□□□ -0.38
XRCC3-206ENST00000554170 VPS41P49754 854 aa12.7□□□□□ -0.38
XRCC3-206ENST00000554170 ILF3Q12906 894 aaKnown RBP eCLIP12.7□□□□□ -0.38
XRCC3-206ENST00000554170 GPS1Q13098 491 aa12.7□□□□□ -0.38
XRCC3-206ENST00000554170 POU6F1Q14863 301 aa12.7□□□□□ -0.38
XRCC3-206ENST00000554170 PPP1R7Q15435 360 aa12.7□□□□□ -0.38
XRCC3-206ENST00000554170 LVRNQ6Q4G3 990 aa12.7□□□□□ -0.38
XRCC3-206ENST00000554170 FAM151BQ6UXP7 276 aa12.7□□□□□ -0.38
XRCC3-206ENST00000554170 SYT10Q6XYQ8 523 aa12.7□□□□□ -0.38
XRCC3-206ENST00000554170 MARK2Q7KZI7 788 aaKnown RBP12.7□□□□□ -0.38
XRCC3-206ENST00000554170 EFL1Q7Z2Z2 1120 aaKnown RBP12.7□□□□□ -0.38
XRCC3-206ENST00000554170 TAF8Q7Z7C8 310 aa12.7□□□□□ -0.38
XRCC3-206ENST00000554170 TRIM74Q86UV6 250 aa12.7□□□□□ -0.38
XRCC3-206ENST00000554170 GALNT13Q8IUC8 556 aa12.7□□□□□ -0.38
XRCC3-206ENST00000554170 CREG2Q8IUH2 290 aa12.7□□□□□ -0.38
XRCC3-206ENST00000554170 ZNF398Q8TD17 642 aa12.7□□□□□ -0.38
XRCC3-206ENST00000554170 TTC25Q96NG3 672 aa12.7□□□□□ -0.38
XRCC3-206ENST00000554170 VPS35Q96QK1 796 aa12.7□□□□□ -0.38
XRCC3-206ENST00000554170 GSDMCQ9BYG8 508 aa12.7□□□□□ -0.38
XRCC3-206ENST00000554170 CLPBQ9H078 707 aa12.7□□□□□ -0.38
XRCC3-206ENST00000554170 RMI1Q9H9A7 625 aa12.7□□□□□ -0.38
XRCC3-206ENST00000554170 TRIM39Q9HCM9 518 aa12.7□□□□□ -0.38
XRCC3-206ENST00000554170 IL26Q9NPH9 171 aa12.7□□□□□ -0.38
XRCC3-206ENST00000554170 TRNAU1APQ9NX07 287 aaKnown RBP12.7□□□□□ -0.38
XRCC3-206ENST00000554170 CNOT6Q9ULM6 557 aaKnown RBP12.7□□□□□ -0.38
XRCC3-206ENST00000554170 LRP4O75096 1905 aa12.69□□□□□ -0.38
XRCC3-206ENST00000554170 UBR5O95071 2799 aaPredicted RBP12.69□□□□□ -0.38
XRCC3-206ENST00000554170 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.69□□□□□ -0.38
XRCC3-206ENST00000554170 PMS2P1A4D2B8 440 aa12.69□□□□□ -0.38
XRCC3-206ENST00000554170 EME2A4GXA9 379 aaPredicted RBP12.69□□□□□ -0.38
XRCC3-206ENST00000554170 GPR89AB7ZAQ6 455 aa12.69□□□□□ -0.38
XRCC3-206ENST00000554170 GPR89BP0CG08 455 aa12.69□□□□□ -0.38
XRCC3-206ENST00000554170 TPSB2P20231 275 aa12.69□□□□□ -0.38
XRCC3-206ENST00000554170 MLLT3P42568 568 aaPredicted RBP12.69□□□□□ -0.38
XRCC3-206ENST00000554170 RPIAP49247 311 aa12.69□□□□□ -0.38
XRCC3-206ENST00000554170 TMPRSS15P98073 1019 aa12.69□□□□□ -0.38
XRCC3-206ENST00000554170 CDK16Q00536 496 aa12.69□□□□□ -0.38
XRCC3-206ENST00000554170 CLN3Q13286 438 aa12.69□□□□□ -0.38
XRCC3-206ENST00000554170 MSLNQ13421 630 aaPredicted RBP12.69□□□□□ -0.38
XRCC3-206ENST00000554170 GTF2H3Q13889 308 aa12.69□□□□□ -0.38
XRCC3-206ENST00000554170 PTPRCAPQ14761 206 aa12.69□□□□□ -0.38
XRCC3-206ENST00000554170 NR0B2Q15466 257 aa12.69□□□□□ -0.38
XRCC3-206ENST00000554170 TCEA2Q15560 299 aa12.69□□□□□ -0.38
XRCC3-206ENST00000554170 TPSAB1Q15661 275 aa12.69□□□□□ -0.38
XRCC3-206ENST00000554170 CHRNA6Q15825 494 aa12.69□□□□□ -0.38
XRCC3-206ENST00000554170 SKIDA1Q1XH10 827 aa12.69□□□□□ -0.38
XRCC3-206ENST00000554170 ATP13A5Q4VNC0 1218 aa12.69□□□□□ -0.38
XRCC3-206ENST00000554170 C6orf132Q5T0Z8 1188 aa12.69□□□□□ -0.38
XRCC3-206ENST00000554170 CCDC81Q6ZN84 652 aa12.69□□□□□ -0.38
XRCC3-206ENST00000554170 NYAP1Q6ZVC0 841 aa12.69□□□□□ -0.38
XRCC3-206ENST00000554170 CLEC14AQ86T13 490 aa12.69□□□□□ -0.38
XRCC3-206ENST00000554170 ARL14Q8N4G2 192 aa12.69□□□□□ -0.38
XRCC3-206ENST00000554170 OR13C4Q8NGS5 318 aa12.69□□□□□ -0.38
XRCC3-206ENST00000554170 STYXQ8WUJ0 223 aa12.69□□□□□ -0.38
XRCC3-206ENST00000554170 SCARF2Q96GP6 870 aaPredicted RBP12.69□□□□□ -0.38
XRCC3-206ENST00000554170 OR2M4Q96R27 311 aa12.69□□□□□ -0.38
XRCC3-206ENST00000554170 DDX47Q9H0S4 455 aaKnown RBP12.69□□□□□ -0.38
XRCC3-206ENST00000554170 TMEM168Q9H0V1 697 aa12.69□□□□□ -0.38
XRCC3-206ENST00000554170 CASS4Q9NQ75 786 aa12.69□□□□□ -0.38
XRCC3-206ENST00000554170 PIH1D1Q9NWS0 290 aaKnown RBP12.69□□□□□ -0.38
XRCC3-206ENST00000554170 ZNHIT2Q9UHR6 403 aa12.69□□□□□ -0.38
XRCC3-206ENST00000554170 FKBPLQ9UIM3 349 aa12.69□□□□□ -0.38
XRCC3-206ENST00000554170 KCTD3Q9Y597 815 aa12.69□□□□□ -0.38
XRCC3-206ENST00000554170 SLC30A1Q9Y6M5 507 aa12.69□□□□□ -0.38
XRCC3-206ENST00000554170 COL12A1Q99715 3063 aa12.68□□□□□ -0.38
XRCC3-206ENST00000554170 NBASA2RRP1 2371 aa12.68□□□□□ -0.38
XRCC3-206ENST00000554170 HEATR9A2RTY3 570 aa12.68□□□□□ -0.38
XRCC3-206ENST00000554170 CCDC188H7C350 402 aa12.68□□□□□ -0.38
XRCC3-206ENST00000554170 LDB2O43679 373 aa12.68□□□□□ -0.38
XRCC3-206ENST00000554170 VEGFDO43915 354 aa12.68□□□□□ -0.38
XRCC3-206ENST00000554170 UGT1A9O60656 530 aa12.68□□□□□ -0.38
XRCC3-206ENST00000554170 SRP72O76094 671 aaKnown RBP12.68□□□□□ -0.38
XRCC3-206ENST00000554170 PRAMEF1O95521 474 aa12.68□□□□□ -0.38
XRCC3-206ENST00000554170 UGT1A6P19224 532 aa12.68□□□□□ -0.38
XRCC3-206ENST00000554170 ITGALP20701 1170 aa12.68□□□□□ -0.38
XRCC3-206ENST00000554170 UGT1A1P22309 533 aa12.68□□□□□ -0.38
XRCC3-206ENST00000554170 UGT1A4P22310 534 aa12.68□□□□□ -0.38
XRCC3-206ENST00000554170 ADRA1DP25100 572 aa12.68□□□□□ -0.38
XRCC3-206ENST00000554170 UGT1A3P35503 534 aa12.68□□□□□ -0.38
XRCC3-206ENST00000554170 UGT1A5P35504 534 aa12.68□□□□□ -0.38
XRCC3-206ENST00000554170 ADCY8P40145 1251 aa12.68□□□□□ -0.38
XRCC3-206ENST00000554170 NPY2RP49146 381 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms