RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 ARHGEF17Q96PE2 2063 aaPredicted RBP9.66□□□□□ -0.86
CHD8-204ENST00000553622 ATXN2Q99700 1313 aaKnown RBP9.65□□□□□ -0.86
CHD8-204ENST00000553622 ZNF318Q5VUA4 2279 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 A0A1W2PPC4 97 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 A6NNZ2 444 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 IQCF5A8MTL0 148 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 F8W8V4 182 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 GOLGA8RI6L899 631 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 AGPSO00116 658 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 TPP1O14773 563 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 SCAMP1O15126 338 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 NIPSNAP2O75323 286 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 VPS26AO75436 327 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 CDK14O94921 469 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 ESR1P03372 595 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 OR56A5P0C7T3 313 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 MYCLP1P12525 358 aaPredicted RBP9.65□□□□□ -0.86
CHD8-204ENST00000553622 PKMP14618 531 aaKnown RBP9.65□□□□□ -0.86
CHD8-204ENST00000553622 CHRM3P20309 590 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 CD27P26842 260 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 TYK2P29597 1187 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 NUDT1P36639 197 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 NSG1P42857 185 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 POLD2P49005 469 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 SERPINB8P50452 374 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 PGGT1BP53609 377 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 B4GALNT1Q00973 533 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 TMEM115Q12893 351 aaPredicted RBP9.65□□□□□ -0.86
CHD8-204ENST00000553622 PLA2G4EQ3MJ16 856 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 HSP90B2PQ58FF3 399 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 CTSL3PQ5NE16 218 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 HECTD2Q5U5R9 776 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 KCTD16Q68DU8 428 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 FAM45BPQ6NSW5 357 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 ZNF549Q6P9A3 640 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 GCNT7Q6ZNI0 430 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 PRR23BQ6ZRT6 265 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 Q6ZSR6 202 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 GALNT7Q86SF2 657 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 ADGRG6Q86SQ4 1221 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 NLRP8Q86W28 1048 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 TDRPQ86YL5 185 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 SRRM1Q8IYB3 904 aaKnown RBP9.65□□□□□ -0.86
CHD8-204ENST00000553622 BEND7Q8N7W2 519 aaPredicted RBP9.65□□□□□ -0.86
CHD8-204ENST00000553622 RASGEF1AQ8N9B8 481 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 ACVR1CQ8NER5 493 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 FAM45AQ8TCE6 357 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 HEXDCQ8WVB3 486 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 SCG3Q8WXD2 468 aaKnown RBP9.65□□□□□ -0.86
CHD8-204ENST00000553622 FUBP1Q96AE4 644 aaKnown RBP9.65□□□□□ -0.86
CHD8-204ENST00000553622 MTBPQ96DY7 904 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 SGF29Q96ES7 293 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 TSPAN17Q96FV3 270 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 GPR22Q99680 433 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 AARSD1Q9BTE6 412 aaKnown RBP9.65□□□□□ -0.86
CHD8-204ENST00000553622 TSSK1BQ9BXA7 367 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 TEX101Q9BY14 249 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 VPS11Q9H270 941 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 TMBIM4Q9HC24 238 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 TRIM39Q9HCM9 518 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 ATXN10Q9UBB4 475 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 ZNHIT2Q9UHR6 403 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 LGALS13Q9UHV8 139 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 CORO1CQ9ULV4 474 aaPredicted RBP9.65□□□□□ -0.86
CHD8-204ENST00000553622 VWA7Q9Y334 891 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 PCDHB1Q9Y5F3 818 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 VCANP13611 3396 aa9.65□□□□□ -0.86
CHD8-204ENST00000553622 A0A1W2PPM1 405 aa9.64□□□□□ -0.87
CHD8-204ENST00000553622 AGAP14A8MT82 685 aa9.64□□□□□ -0.87
CHD8-204ENST00000553622 H3BMM5 538 aa9.64□□□□□ -0.87
CHD8-204ENST00000553622 PHGDHO43175 533 aaKnown RBP9.64□□□□□ -0.87
CHD8-204ENST00000553622 ATP8B1O43520 1251 aa9.64□□□□□ -0.87
CHD8-204ENST00000553622 GPR37L1O60883 481 aa9.64□□□□□ -0.87
CHD8-204ENST00000553622 SP9P0CG40 484 aa9.64□□□□□ -0.87
CHD8-204ENST00000553622 STMN1P16949 149 aa9.64□□□□□ -0.87
CHD8-204ENST00000553622 ZNF8P17098 575 aaPredicted RBP9.64□□□□□ -0.87
CHD8-204ENST00000553622 RPS3P23396 243 aaKnown RBP eCLIP9.64□□□□□ -0.87
CHD8-204ENST00000553622 HTR1BP28222 390 aa9.64□□□□□ -0.87
CHD8-204ENST00000553622 TEAD1P28347 426 aa9.64□□□□□ -0.87
CHD8-204ENST00000553622 CDKN2DP55273 166 aa9.64□□□□□ -0.87
CHD8-204ENST00000553622 TAS2R39P59534 338 aa9.64□□□□□ -0.87
CHD8-204ENST00000553622 POU4F1Q01851 419 aa9.64□□□□□ -0.87
CHD8-204ENST00000553622 PPARDQ03181 441 aa9.64□□□□□ -0.87
CHD8-204ENST00000553622 PDAP1Q13442 181 aaKnown RBP9.64□□□□□ -0.87
CHD8-204ENST00000553622 ZNF460Q14592 562 aa9.64□□□□□ -0.87
CHD8-204ENST00000553622 NFATC4Q14934 902 aa9.64□□□□□ -0.87
CHD8-204ENST00000553622 TCEA2Q15560 299 aa9.64□□□□□ -0.87
CHD8-204ENST00000553622 TAF1BQ53T94 588 aaPredicted RBP9.64□□□□□ -0.87
CHD8-204ENST00000553622 WDR45BQ5MNZ6 344 aa9.64□□□□□ -0.87
CHD8-204ENST00000553622 LYSMD4Q5XG99 296 aa9.64□□□□□ -0.87
CHD8-204ENST00000553622 TMEM220Q6QAJ8 160 aa9.64□□□□□ -0.87
CHD8-204ENST00000553622 ENPP7Q6UWV6 458 aa9.64□□□□□ -0.87
CHD8-204ENST00000553622 LAYNQ6UX15 382 aa9.64□□□□□ -0.87
CHD8-204ENST00000553622 KYAT3Q6YP21 454 aaKnown RBP9.64□□□□□ -0.87
CHD8-204ENST00000553622 RD3Q7Z3Z2 195 aa9.64□□□□□ -0.87
CHD8-204ENST00000553622 CMC1Q7Z7K0 106 aa9.64□□□□□ -0.87
CHD8-204ENST00000553622 PIM3Q86V86 326 aa9.64□□□□□ -0.87
CHD8-204ENST00000553622 C11orf74Q86VG3 221 aa9.64□□□□□ -0.87
CHD8-204ENST00000553622 TMEM145Q8NBT3 493 aa9.64□□□□□ -0.87
CHD8-204ENST00000553622 OR13H1Q8NG92 308 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms