RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 C19orf60Q96EN9 201 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 ZBED3Q96IU2 234 aaPredicted RBP8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 Q96MT0 163 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 CAMK1GQ96NX5 476 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 SPATA5L1Q9BVQ7 753 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 BHLHE41Q9C0J9 482 aaPredicted RBP8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 OR51B5Q9H339 312 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 CRLF2Q9HC73 371 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 TMEM161AQ9NX61 479 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 TNFRSF10DQ9UBN6 386 aa8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 CNOT6Q9ULM6 557 aaKnown RBP8.94□□□□□ -0.98
GTF2A1-203ENST00000553612 KBTBD13C9JR72 458 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 NKRFO15226 690 aaKnown RBP eCLIP8.93□□□□□ -0.981e-7■■□□□ 12.2
GTF2A1-203ENST00000553612 AP2A2O94973 939 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 SERPINA1P01009 418 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 NCF1P14598 390 aaPredicted RBP8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 ITGB6P18564 788 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 SOX9P48436 509 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 SCNN1GP51170 649 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 TRAM1Q15629 374 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 ZNF782Q6ZMW2 699 aaPredicted RBP8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 GK5Q6ZS86 529 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 JAZF1Q86VZ6 243 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 CPXCR1Q8N123 301 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 ART4Q93070 314 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 C3orf49Q96BT1 292 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 RRNAD1Q96FB5 475 aaKnown RBP8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 PNO1Q9NRX1 252 aaKnown RBP8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 PTPRTO14522 1441 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 PDCD5O14737 125 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 HNRNPDLO14979 420 aaKnown RBP8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 MSH4O15457 936 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 CDC123O75794 336 aaPredicted RBP8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 HOXA13P31271 388 aaPredicted RBP8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 SHMT1P34896 483 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 BMPR1AP36894 532 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 TGFBR2P37173 567 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 ELK3P41970 407 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 MAGEA12P43365 314 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 CDH6P55285 790 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 C21orf58P58505 322 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 SKP1P63208 163 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 CNSTQ6PJW8 725 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 LIPIQ6XZB0 460 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 KDF1Q8NAX2 398 aaPredicted RBP8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 OR52N1Q8NH53 320 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 DNAJB14Q8TBM8 379 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 SMPD3Q9NY59 655 aaPredicted RBP8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 PDE10AQ9Y233 779 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 M0R036 132 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 MID1O15344 667 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 DNTTP04053 509 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 UBA1P22314 1058 aaKnown RBP8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 EN1Q05925 392 aaPredicted RBP8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 SNAPC2Q13487 334 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 AANATQ16613 207 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 OGFRL1Q5TC84 451 aaPredicted RBP8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 FGD2Q7Z6J4 655 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 SYN2Q92777 582 aaPredicted RBP8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 CCDC126Q96EE4 140 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 SERPINB11Q96P15 392 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 GPRC5CQ9NQ84 441 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 ABCD2Q9UBJ2 740 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 TMX2Q9Y320 296 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 FFAR3O14843 346 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 GPR42O15529 346 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 AVILO75366 819 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 CABYRO75952 493 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 PTTG1O95997 202 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 BCAR1P56945 870 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 TSPAN5P62079 268 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 KCNJ11Q14654 390 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 DDR2Q16832 855 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 PKN3Q6P5Z2 889 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 ASB18Q6ZVZ8 466 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 THAP5Q7Z6K1 395 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 NLGN4XQ8N0W4 816 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 MSTO1Q9BUK6 570 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 HDHD5Q9BXW7 423 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 AGXT2Q9BYV1 514 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 CRISPLD1Q9H336 500 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 GPN3Q9UHW5 284 aaPredicted RBP8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 KDM6AO15550 1401 aaPredicted RBP8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 GRIN2AQ12879 1464 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 BTBD17A6NE02 478 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 ERVV-2B6SEH9 535 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 NPHS1O60500 1241 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 BCAS1O75363 584 aaPredicted RBP8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 PCCBP05166 539 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 FPR3P25089 353 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 MAGEA11P43364 429 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 MAP2K4P45985 399 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 CHRNB3Q05901 458 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 PSMD5Q16401 504 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 INTS6LQ5JSJ4 861 aaKnown RBP8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 STEAP3Q658P3 488 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 KYAT3Q6YP21 454 aaKnown RBP8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 OR2T3Q8NH03 318 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 THAP6Q8TBB0 222 aa8.93□□□□□ -0.98
GTF2A1-203ENST00000553612 CNPPD1Q9BV87 410 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms