RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 SLC40A1Q9NP59 571 aa8.93□□□□□ -0.98
SYNE2-209ENST00000553308 MLXIPLQ9NP71 852 aa8.93□□□□□ -0.98
SYNE2-209ENST00000553308 POT1Q9NUX5 634 aa8.93□□□□□ -0.98
SYNE2-209ENST00000553308 RBM22Q9NW64 420 aaKnown RBP eCLIP8.93□□□□□ -0.98
SYNE2-209ENST00000553308 RPL26L1Q9UNX3 145 aaKnown RBP8.93□□□□□ -0.98
SYNE2-209ENST00000553308 PCDHGA9Q9Y5G4 932 aaKnown RBP8.93□□□□□ -0.98
SYNE2-209ENST00000553308 SCINQ9Y6U3 715 aa8.93□□□□□ -0.98
SYNE2-209ENST00000553308 IGHV5-51A0A0C4DH38 117 aa8.92□□□□□ -0.98
SYNE2-209ENST00000553308 CHUKO15111 745 aa8.92□□□□□ -0.98
SYNE2-209ENST00000553308 MATN3O15232 486 aa8.92□□□□□ -0.98
SYNE2-209ENST00000553308 SLC4A1P02730 911 aa8.92□□□□□ -0.98
SYNE2-209ENST00000553308 PIRTP0C851 137 aa8.92□□□□□ -0.98
SYNE2-209ENST00000553308 EBLN1P0CF75 366 aa8.92□□□□□ -0.98
SYNE2-209ENST00000553308 GZMAP12544 262 aa8.92□□□□□ -0.98
SYNE2-209ENST00000553308 ZNF7P17097 686 aaPredicted RBP8.92□□□□□ -0.98
SYNE2-209ENST00000553308 CA4P22748 312 aa8.92□□□□□ -0.98
SYNE2-209ENST00000553308 PTPN4P29074 926 aa8.92□□□□□ -0.98
SYNE2-209ENST00000553308 DCTP40126 519 aa8.92□□□□□ -0.98
SYNE2-209ENST00000553308 PTGIRP43119 386 aa8.92□□□□□ -0.98
SYNE2-209ENST00000553308 CCL11P51671 97 aa8.92□□□□□ -0.98
SYNE2-209ENST00000553308 DRG2P55039 364 aaKnown RBP8.92□□□□□ -0.98
SYNE2-209ENST00000553308 GALNT3Q14435 633 aa8.92□□□□□ -0.98
SYNE2-209ENST00000553308 KRT81Q14533 505 aa8.92□□□□□ -0.98
SYNE2-209ENST00000553308 ASIC2Q16515 512 aa8.92□□□□□ -0.98
SYNE2-209ENST00000553308 KHDC1Q4VXA5 237 aaKnown RBP8.92□□□□□ -0.98
SYNE2-209ENST00000553308 PAPD7Q5XG87 772 aaKnown RBP8.92□□□□□ -0.98
SYNE2-209ENST00000553308 NCBP2-AS2Q69YL0 99 aa8.92□□□□□ -0.98
SYNE2-209ENST00000553308 TIGD7Q6NT04 549 aaPredicted RBP8.92□□□□□ -0.98
SYNE2-209ENST00000553308 JMJD6Q6NYC1 403 aaPredicted RBP8.92□□□□□ -0.98
SYNE2-209ENST00000553308 CERS6Q6ZMG9 384 aa8.92□□□□□ -0.98
SYNE2-209ENST00000553308 MAMDC2Q7Z304 686 aaPredicted RBP8.92□□□□□ -0.98
SYNE2-209ENST00000553308 SYVN1Q86TM6 617 aa8.92□□□□□ -0.98
SYNE2-209ENST00000553308 LRRTM4Q86VH4 590 aa8.92□□□□□ -0.98
SYNE2-209ENST00000553308 LRRC49Q8IUZ0 686 aa8.92□□□□□ -0.98
SYNE2-209ENST00000553308 ZNF547Q8IVP9 402 aa8.92□□□□□ -0.98
SYNE2-209ENST00000553308 Q8NA96 180 aa8.92□□□□□ -0.98
SYNE2-209ENST00000553308 SIDT2Q8NBJ9 832 aaKnown RBP8.92□□□□□ -0.98
SYNE2-209ENST00000553308 GPR26Q8NDV2 337 aa8.92□□□□□ -0.98
SYNE2-209ENST00000553308 ANKRD20A12PQ8NF67 263 aa8.92□□□□□ -0.98
SYNE2-209ENST00000553308 CCHCR1Q8TD31 782 aa8.92□□□□□ -0.98
SYNE2-209ENST00000553308 TEKT4Q8WW24 435 aa8.92□□□□□ -0.98
SYNE2-209ENST00000553308 THAP4Q8WY91 577 aa8.92□□□□□ -0.98
SYNE2-209ENST00000553308 CXorf40BQ96DE9 158 aa8.92□□□□□ -0.98
SYNE2-209ENST00000553308 ZDHHC12Q96GR4 267 aa8.92□□□□□ -0.98
SYNE2-209ENST00000553308 SLC41A2Q96JW4 573 aa8.92□□□□□ -0.98
SYNE2-209ENST00000553308 BTBD6Q96KE9 485 aa8.92□□□□□ -0.98
SYNE2-209ENST00000553308 MLPHQ9BV36 600 aaPredicted RBP8.92□□□□□ -0.98
SYNE2-209ENST00000553308 MFRPQ9BY79 579 aa8.92□□□□□ -0.98
SYNE2-209ENST00000553308 ING2Q9H160 280 aa8.92□□□□□ -0.98
SYNE2-209ENST00000553308 TRIM39Q9HCM9 518 aa8.92□□□□□ -0.98
SYNE2-209ENST00000553308 PDE7BQ9NP56 450 aa8.92□□□□□ -0.98
SYNE2-209ENST00000553308 ACSS2Q9NR19 701 aa8.92□□□□□ -0.98
SYNE2-209ENST00000553308 TRIM10Q9UDY6 481 aa8.92□□□□□ -0.98
SYNE2-209ENST00000553308 EPHA6Q9UF33 1036 aa8.92□□□□□ -0.98
SYNE2-209ENST00000553308 RARRES3Q9UL19 164 aa8.92□□□□□ -0.98
SYNE2-209ENST00000553308 RGSL1A5PLK6 1076 aa8.91□□□□□ -0.98
SYNE2-209ENST00000553308 ANKRD66B4E2M5 251 aa8.91□□□□□ -0.98
SYNE2-209ENST00000553308 GPR89AB7ZAQ6 455 aa8.91□□□□□ -0.98
SYNE2-209ENST00000553308 KMOO15229 486 aa8.91□□□□□ -0.98
SYNE2-209ENST00000553308 DDAH2O95865 285 aa8.91□□□□□ -0.98
SYNE2-209ENST00000553308 MMP2P08253 660 aa8.91□□□□□ -0.98
SYNE2-209ENST00000553308 GPR89BP0CG08 455 aa8.91□□□□□ -0.98
SYNE2-209ENST00000553308 CES1P23141 567 aa8.91□□□□□ -0.98
SYNE2-209ENST00000553308 CD86P42081 329 aa8.91□□□□□ -0.98
SYNE2-209ENST00000553308 DCDC1P59894 354 aa8.91□□□□□ -0.98
SYNE2-209ENST00000553308 MYL5Q02045 173 aa8.91□□□□□ -0.98
SYNE2-209ENST00000553308 ESPL1Q14674 2120 aa8.91□□□□□ -0.98
SYNE2-209ENST00000553308 PAFAH1B3Q15102 231 aaKnown RBP8.91□□□□□ -0.98
SYNE2-209ENST00000553308 CHRNA6Q15825 494 aa8.91□□□□□ -0.98
SYNE2-209ENST00000553308 CCDC122Q5T0U0 273 aa8.91□□□□□ -0.98
SYNE2-209ENST00000553308 FAM182AQ5T1J6 154 aa8.91□□□□□ -0.98
SYNE2-209ENST00000553308 SLC6A19Q695T7 634 aa8.91□□□□□ -0.98
SYNE2-209ENST00000553308 CYB5D1Q6P9G0 228 aa8.91□□□□□ -0.98
SYNE2-209ENST00000553308 ABRAXAS1Q6UWZ7 409 aa8.91□□□□□ -0.98
SYNE2-209ENST00000553308 GPR150Q8NGU9 434 aa8.91□□□□□ -0.98
SYNE2-209ENST00000553308 PRR7Q8TB68 274 aa8.91□□□□□ -0.98
SYNE2-209ENST00000553308 SEC14L1Q92503 715 aa8.91□□□□□ -0.98
SYNE2-209ENST00000553308 GLYATL1Q969I3 302 aa8.91□□□□□ -0.98
SYNE2-209ENST00000553308 TCTN2Q96GX1 697 aa8.91□□□□□ -0.98
SYNE2-209ENST00000553308 MAP3K3Q99759 626 aa8.91□□□□□ -0.98
SYNE2-209ENST00000553308 TIMM29Q9BSF4 260 aa8.91□□□□□ -0.98
SYNE2-209ENST00000553308 ZSCAN5AQ9BUG6 496 aa8.91□□□□□ -0.98
SYNE2-209ENST00000553308 NUP85Q9BW27 656 aa8.91□□□□□ -0.98
SYNE2-209ENST00000553308 GPR87Q9BY21 358 aa8.91□□□□□ -0.98
SYNE2-209ENST00000553308 RAB33BQ9H082 229 aa8.91□□□□□ -0.98
SYNE2-209ENST00000553308 HSD3B7Q9H2F3 369 aa8.91□□□□□ -0.98
SYNE2-209ENST00000553308 MRPL47Q9HD33 250 aaKnown RBP8.91□□□□□ -0.98
SYNE2-209ENST00000553308 FGF21Q9NSA1 209 aa8.91□□□□□ -0.98
SYNE2-209ENST00000553308 SEMA5BQ9P283 1151 aa8.91□□□□□ -0.98
SYNE2-209ENST00000553308 MAP10Q9P2G4 905 aa8.91□□□□□ -0.98
SYNE2-209ENST00000553308 AMACRQ9UHK6 382 aa8.91□□□□□ -0.98
SYNE2-209ENST00000553308 ERRFI1Q9UJM3 462 aaPredicted RBP8.91□□□□□ -0.98
SYNE2-209ENST00000553308 MYO6Q9UM54 1294 aa8.91□□□□□ -0.98
SYNE2-209ENST00000553308 SHOC2Q9UQ13 582 aa8.91□□□□□ -0.98
SYNE2-209ENST00000553308 WDR37Q9Y2I8 494 aa8.91□□□□□ -0.98
SYNE2-209ENST00000553308 CACNA1DQ01668 2161 aa8.9□□□□□ -0.98
SYNE2-209ENST00000553308 LRRC10BA6NIK2 292 aa8.9□□□□□ -0.98
SYNE2-209ENST00000553308 KRT86O43790 486 aa8.9□□□□□ -0.98
SYNE2-209ENST00000553308 CEACAM4O75871 244 aa8.9□□□□□ -0.98
SYNE2-209ENST00000553308 MYBL1P10243 752 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms