RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 NCKIPSDQ9NZQ3 722 aa19.33■□□□□ 0.69
RBFOX1-215ENST00000553186 F5P12259 2224 aa19.33■□□□□ 0.69
RBFOX1-215ENST00000553186 F8W8V4 182 aa19.33■□□□□ 0.68
RBFOX1-215ENST00000553186 CDC7O00311 574 aa19.33■□□□□ 0.68
RBFOX1-215ENST00000553186 KIAA0754O94854 1291 aa19.33■□□□□ 0.68
RBFOX1-215ENST00000553186 ITGB6P18564 788 aa19.33■□□□□ 0.68
RBFOX1-215ENST00000553186 P2RY2P41231 377 aa19.33■□□□□ 0.68
RBFOX1-215ENST00000553186 AQP5P55064 265 aa19.33■□□□□ 0.68
RBFOX1-215ENST00000553186 ACOX1Q15067 660 aa19.33■□□□□ 0.68
RBFOX1-215ENST00000553186 SLC22A9Q8IVM8 553 aa19.33■□□□□ 0.68
RBFOX1-215ENST00000553186 WDR75Q8IWA0 830 aaKnown RBP19.33■□□□□ 0.68
RBFOX1-215ENST00000553186 NRSN1Q8IZ57 195 aa19.33■□□□□ 0.68
RBFOX1-215ENST00000553186 CCNYL1Q8N7R7 359 aa19.33■□□□□ 0.68
RBFOX1-215ENST00000553186 INPP5DQ92835 1189 aa19.33■□□□□ 0.68
RBFOX1-215ENST00000553186 FUBP1Q96AE4 644 aaKnown RBP19.33■□□□□ 0.68
RBFOX1-215ENST00000553186 RSPH9Q9H1X1 276 aaPredicted RBP19.33■□□□□ 0.68
RBFOX1-215ENST00000553186 KCNK12Q9HB15 430 aa19.33■□□□□ 0.68
RBFOX1-215ENST00000553186 DYRK4Q9NR20 520 aa19.33■□□□□ 0.68
RBFOX1-215ENST00000553186 MBD1Q9UIS9 605 aaPredicted RBP19.33■□□□□ 0.68
RBFOX1-215ENST00000553186 HAO1Q9UJM8 370 aa19.33■□□□□ 0.68
RBFOX1-215ENST00000553186 TICRRQ7Z2Z1 1910 aa19.32■□□□□ 0.68
RBFOX1-215ENST00000553186 ANKRD65E5RJM6 399 aa19.32■□□□□ 0.68
RBFOX1-215ENST00000553186 ZNF195O14628 629 aa19.32■□□□□ 0.68
RBFOX1-215ENST00000553186 WNT9AO14904 365 aa19.32■□□□□ 0.68
RBFOX1-215ENST00000553186 HGSO14964 777 aaPredicted RBP19.32■□□□□ 0.68
RBFOX1-215ENST00000553186 NPHS1O60500 1241 aa19.32■□□□□ 0.68
RBFOX1-215ENST00000553186 TRIM16O95361 564 aa19.32■□□□□ 0.68
RBFOX1-215ENST00000553186 TIE1P35590 1138 aa19.32■□□□□ 0.68
RBFOX1-215ENST00000553186 SEC13P55735 322 aa19.32■□□□□ 0.68
RBFOX1-215ENST00000553186 CCDC15Q0P6D6 951 aa19.32■□□□□ 0.68
RBFOX1-215ENST00000553186 MAVSQ7Z434 540 aa19.32■□□□□ 0.68
RBFOX1-215ENST00000553186 CYP2U1Q7Z449 544 aa19.32■□□□□ 0.68
RBFOX1-215ENST00000553186 DTD2Q96FN9 168 aa19.32■□□□□ 0.68
RBFOX1-215ENST00000553186 GAS2L1Q99501 681 aaPredicted RBP19.32■□□□□ 0.68
RBFOX1-215ENST00000553186 SIKE1Q9BRV8 207 aa19.32■□□□□ 0.68
RBFOX1-215ENST00000553186 LATS2Q9NRM7 1088 aa19.32■□□□□ 0.68
RBFOX1-215ENST00000553186 PLXNB3Q9ULL4 1909 aa19.32■□□□□ 0.68
RBFOX1-215ENST00000553186 UBXN8O00124 270 aa19.32■□□□□ 0.68
RBFOX1-215ENST00000553186 BTN3A1O00481 513 aa19.32■□□□□ 0.68
RBFOX1-215ENST00000553186 MBTPS2O43462 519 aa19.32■□□□□ 0.68
RBFOX1-215ENST00000553186 TPBGLP0DKB5 382 aa19.32■□□□□ 0.68
RBFOX1-215ENST00000553186 ALOX15P16050 662 aaPredicted RBP19.32■□□□□ 0.68
RBFOX1-215ENST00000553186 DRD3P35462 400 aa19.32■□□□□ 0.68
RBFOX1-215ENST00000553186 CREB5Q02930 508 aa19.32■□□□□ 0.68
RBFOX1-215ENST00000553186 CNTN1Q12860 1018 aa19.32■□□□□ 0.68
RBFOX1-215ENST00000553186 GALNTL6Q49A17 601 aa19.32■□□□□ 0.68
RBFOX1-215ENST00000553186 C2orf27AQ580R0 203 aa19.32■□□□□ 0.68
RBFOX1-215ENST00000553186 FAM46CQ5VWP2 391 aa19.32■□□□□ 0.68
RBFOX1-215ENST00000553186 SLC44A3Q8N4M1 653 aa19.32■□□□□ 0.68
RBFOX1-215ENST00000553186 LRRC37BQ96QE4 947 aa19.32■□□□□ 0.68
RBFOX1-215ENST00000553186 ILKAPQ9H0C8 392 aaPredicted RBP19.32■□□□□ 0.68
RBFOX1-215ENST00000553186 LIMD1Q9UGP4 676 aa19.32■□□□□ 0.68
RBFOX1-215ENST00000553186 CCDC189A1A4V9 331 aa19.31■□□□□ 0.68
RBFOX1-215ENST00000553186 NPEPPSL1A6NEC2 478 aa19.31■□□□□ 0.68
RBFOX1-215ENST00000553186 DCTN3O75935 186 aa19.31■□□□□ 0.68
RBFOX1-215ENST00000553186 IMPDH1P20839 514 aa19.31■□□□□ 0.68
RBFOX1-215ENST00000553186 SATB1Q01826 763 aa19.31■□□□□ 0.68
RBFOX1-215ENST00000553186 SMAD4Q13485 552 aaKnown RBP19.31■□□□□ 0.68
RBFOX1-215ENST00000553186 ZNF284Q2VY69 593 aa19.31■□□□□ 0.68
RBFOX1-215ENST00000553186 TMEM52BQ4KMG9 183 aa19.31■□□□□ 0.68
RBFOX1-215ENST00000553186 KHDC1Q4VXA5 237 aaKnown RBP19.31■□□□□ 0.68
RBFOX1-215ENST00000553186 LACTB2Q53H82 288 aaPredicted RBP19.31■□□□□ 0.68
RBFOX1-215ENST00000553186 PIP5KL1Q5T9C9 394 aa19.31■□□□□ 0.68
RBFOX1-215ENST00000553186 DDHD1Q8NEL9 900 aa19.31■□□□□ 0.68
RBFOX1-215ENST00000553186 AP2M1Q96CW1 435 aa19.31■□□□□ 0.68
RBFOX1-215ENST00000553186 L3HYPDHQ96EM0 354 aa19.31■□□□□ 0.68
RBFOX1-215ENST00000553186 CNDP1Q96KN2 507 aa19.31■□□□□ 0.68
RBFOX1-215ENST00000553186 VPS35Q96QK1 796 aa19.31■□□□□ 0.68
RBFOX1-215ENST00000553186 SPATS2LQ9NUQ6 558 aaKnown RBP19.31■□□□□ 0.68
RBFOX1-215ENST00000553186 HEY2Q9UBP5 337 aa19.31■□□□□ 0.68
RBFOX1-215ENST00000553186 COQ6Q9Y2Z9 468 aa19.31■□□□□ 0.68
RBFOX1-215ENST00000553186 RAP2CQ9Y3L5 183 aa19.31■□□□□ 0.68
RBFOX1-215ENST00000553186 PLXNA2O75051 1894 aa19.31■□□□□ 0.68
RBFOX1-215ENST00000553186 SMIM24O75264 130 aa19.3■□□□□ 0.68
RBFOX1-215ENST00000553186 MTX2O75431 263 aa19.3■□□□□ 0.68
RBFOX1-215ENST00000553186 UBOX5O94941 541 aa19.3■□□□□ 0.68
RBFOX1-215ENST00000553186 MPSTP25325 297 aa19.3■□□□□ 0.68
RBFOX1-215ENST00000553186 SERPINB5P36952 375 aa19.3■□□□□ 0.68
RBFOX1-215ENST00000553186 E2F5Q15329 346 aa19.3■□□□□ 0.68
RBFOX1-215ENST00000553186 AADATQ8N5Z0 425 aa19.3■□□□□ 0.68
RBFOX1-215ENST00000553186 BTN2A2Q8WVV5 523 aa19.3■□□□□ 0.68
RBFOX1-215ENST00000553186 EXT2Q93063 718 aa19.3■□□□□ 0.68
RBFOX1-215ENST00000553186 RAB7BQ96AH8 199 aa19.3■□□□□ 0.68
RBFOX1-215ENST00000553186 EBF4Q9BQW3 602 aa19.3■□□□□ 0.68
RBFOX1-215ENST00000553186 UBE2ZQ9H832 354 aaPredicted RBP19.3■□□□□ 0.68
RBFOX1-215ENST00000553186 HEBP1Q9NRV9 189 aa19.3■□□□□ 0.68
RBFOX1-215ENST00000553186 RNF112Q9ULX5 631 aa19.3■□□□□ 0.68
RBFOX1-215ENST00000553186 RECQL5O94762 991 aaPredicted RBP19.3■□□□□ 0.68
RBFOX1-215ENST00000553186 C6P13671 934 aa19.3■□□□□ 0.68
RBFOX1-215ENST00000553186 ATP1B2P14415 290 aaPredicted RBP19.3■□□□□ 0.68
RBFOX1-215ENST00000553186 HERVK_113P63132 956 aa19.3■□□□□ 0.68
RBFOX1-215ENST00000553186 CST6Q15828 149 aa19.3■□□□□ 0.68
RBFOX1-215ENST00000553186 CFAP157Q5JU67 520 aa19.3■□□□□ 0.68
RBFOX1-215ENST00000553186 ZNF678Q5SXM1 525 aa19.3■□□□□ 0.68
RBFOX1-215ENST00000553186 MTDHQ86UE4 582 aaKnown RBP19.3■□□□□ 0.68
RBFOX1-215ENST00000553186 RALGPS2Q86X27 583 aaPredicted RBP19.3■□□□□ 0.68
RBFOX1-215ENST00000553186 ZBTB2Q8N680 514 aa19.3■□□□□ 0.68
RBFOX1-215ENST00000553186 GBP7Q8N8V2 638 aaPredicted RBP19.3■□□□□ 0.68
RBFOX1-215ENST00000553186 SKA1Q96BD8 255 aa19.3■□□□□ 0.68
RBFOX1-215ENST00000553186 ERP27Q96DN0 273 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms