RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 TUBB1Q9H4B7 451 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 TREX1Q9NSU2 369 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 ERGIC3Q9Y282 383 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 TPD52L2O43399 206 aaKnown RBP12.26□□□□□ -0.45
HDAC7-230ENST00000552960 F9P00740 461 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 WARSP23381 471 aaKnown RBP12.26□□□□□ -0.45
HDAC7-230ENST00000552960 PRDX3P30048 256 aaKnown RBP12.26□□□□□ -0.45
HDAC7-230ENST00000552960 GRK4P32298 578 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 SERPINH1P50454 418 aaKnown RBP12.26□□□□□ -0.45
HDAC7-230ENST00000552960 SPCS2Q15005 226 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 INTS6LQ5JSJ4 861 aaKnown RBP12.26□□□□□ -0.45
HDAC7-230ENST00000552960 CLLU1OSQ5K130 101 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 ANKRD34AQ69YU3 496 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 NIPAL1Q6NVV3 410 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 C8orf82Q6P1X6 216 aaPredicted RBP12.26□□□□□ -0.45
HDAC7-230ENST00000552960 DCLRE1AQ6PJP8 1040 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 SPRED1Q7Z699 444 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 CILP2Q8IUL8 1156 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 RAVER1Q8IY67 606 aaKnown RBP12.26□□□□□ -0.45
HDAC7-230ENST00000552960 TBC1D21Q8IYX1 336 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 DCP1BQ8IZD4 617 aaKnown RBP12.26□□□□□ -0.45
HDAC7-230ENST00000552960 TERB1Q8NA31 727 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 OR13F1Q8NGS4 319 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 SCAMP5Q8TAC9 235 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 CHPT1Q8WUD6 406 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 TMBIM1Q969X1 311 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 TMEM125Q96AQ2 219 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 SDCCAG3Q96C92 435 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 CSF3RQ99062 836 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 HERC2P3Q9BVR0 1158 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 HMX1Q9NP08 348 aaPredicted RBP12.26□□□□□ -0.45
HDAC7-230ENST00000552960 GNPTGQ9UJJ9 305 aa12.26□□□□□ -0.45
HDAC7-230ENST00000552960 PRG3Q9Y2Y8 225 aaPredicted RBP12.26□□□□□ -0.45
HDAC7-230ENST00000552960 KRBA1A5PL33 1030 aa12.25□□□□□ -0.45
HDAC7-230ENST00000552960 MAFKO60675 156 aa12.25□□□□□ -0.45
HDAC7-230ENST00000552960 CLASP2O75122 1294 aaKnown RBP12.25□□□□□ -0.45
HDAC7-230ENST00000552960 INHBBP09529 407 aa12.25□□□□□ -0.45
HDAC7-230ENST00000552960 PRSS56P0CW18 603 aa12.25□□□□□ -0.45
HDAC7-230ENST00000552960 MBL2P11226 248 aaPredicted RBP12.25□□□□□ -0.45
HDAC7-230ENST00000552960 TCF3P15923 654 aa12.25□□□□□ -0.45
HDAC7-230ENST00000552960 CCNCP24863 283 aa12.25□□□□□ -0.45
HDAC7-230ENST00000552960 DNAJB2P25686 324 aa12.25□□□□□ -0.45
HDAC7-230ENST00000552960 POLD2P49005 469 aa12.25□□□□□ -0.45
HDAC7-230ENST00000552960 HCAR3P49019 387 aa12.25□□□□□ -0.45
HDAC7-230ENST00000552960 PLA2G16P53816 162 aa12.25□□□□□ -0.45
HDAC7-230ENST00000552960 SCAPQ12770 1279 aa12.25□□□□□ -0.45
HDAC7-230ENST00000552960 ZNF362Q5T0B9 420 aaPredicted RBP12.25□□□□□ -0.45
HDAC7-230ENST00000552960 ZNF773Q6PK81 442 aa12.25□□□□□ -0.45
HDAC7-230ENST00000552960 TOP6BLQ8N6T0 577 aa12.25□□□□□ -0.45
HDAC7-230ENST00000552960 FIG4Q92562 907 aa12.25□□□□□ -0.45
HDAC7-230ENST00000552960 SCLYQ96I15 445 aa12.25□□□□□ -0.45
HDAC7-230ENST00000552960 TRMOQ9BU70 441 aa12.25□□□□□ -0.45
HDAC7-230ENST00000552960 CNGB3Q9NQW8 809 aa12.25□□□□□ -0.45
HDAC7-230ENST00000552960 POLE4Q9NR33 117 aa12.25□□□□□ -0.45
HDAC7-230ENST00000552960 ABCD2Q9UBJ2 740 aa12.25□□□□□ -0.45
HDAC7-230ENST00000552960 U3KQV3 271 aa12.25□□□□□ -0.45
HDAC7-230ENST00000552960 TRIM64CA6NLI5 447 aa12.25□□□□□ -0.45
HDAC7-230ENST00000552960 MATN3O15232 486 aa12.25□□□□□ -0.45
HDAC7-230ENST00000552960 PAGE1O75459 146 aa12.25□□□□□ -0.45
HDAC7-230ENST00000552960 OXSR1O95747 527 aaPredicted RBP12.25□□□□□ -0.45
HDAC7-230ENST00000552960 IDUAP35475 653 aa12.25□□□□□ -0.45
HDAC7-230ENST00000552960 DSC2Q02487 901 aa12.25□□□□□ -0.45
HDAC7-230ENST00000552960 OR4D1Q15615 310 aa12.25□□□□□ -0.45
HDAC7-230ENST00000552960 RBBP7Q16576 425 aa12.25□□□□□ -0.45
HDAC7-230ENST00000552960 SMYD5Q6GMV2 418 aa12.25□□□□□ -0.45
HDAC7-230ENST00000552960 SLC2A7Q6PXP3 512 aa12.25□□□□□ -0.45
HDAC7-230ENST00000552960 RANBP10Q6VN20 620 aa12.25□□□□□ -0.45
HDAC7-230ENST00000552960 MRPL10Q7Z7H8 261 aaKnown RBP12.25□□□□□ -0.45
HDAC7-230ENST00000552960 ARHGAP12Q8IWW6 846 aa12.25□□□□□ -0.45
HDAC7-230ENST00000552960 ABHD11Q8NFV4 315 aa12.25□□□□□ -0.45
HDAC7-230ENST00000552960 TRUB1Q8WWH5 349 aaKnown RBP12.25□□□□□ -0.45
HDAC7-230ENST00000552960 KCTD13Q8WZ19 329 aa12.25□□□□□ -0.45
HDAC7-230ENST00000552960 FCRL2Q96LA5 508 aaPredicted RBP12.25□□□□□ -0.45
HDAC7-230ENST00000552960 NANOGQ9H9S0 305 aa12.25□□□□□ -0.45
HDAC7-230ENST00000552960 INTS10Q9NVR2 710 aaKnown RBP12.25□□□□□ -0.45
HDAC7-230ENST00000552960 BAG5Q9UL15 447 aa12.25□□□□□ -0.45
HDAC7-230ENST00000552960 GIT1Q9Y2X7 761 aa12.25□□□□□ -0.45
HDAC7-230ENST00000552960 MYO7AQ13402 2215 aa12.25□□□□□ -0.45
HDAC7-230ENST00000552960 KPNA4O00629 521 aaPredicted RBP12.24□□□□□ -0.45
HDAC7-230ENST00000552960 ENPP3O14638 875 aa12.24□□□□□ -0.45
HDAC7-230ENST00000552960 TSPAN3O60637 253 aa12.24□□□□□ -0.45
HDAC7-230ENST00000552960 GMNNO75496 209 aa12.24□□□□□ -0.45
HDAC7-230ENST00000552960 CNTN5O94779 1100 aa12.24□□□□□ -0.45
HDAC7-230ENST00000552960 C1RP00736 705 aa12.24□□□□□ -0.45
HDAC7-230ENST00000552960 ARSFP54793 590 aa12.24□□□□□ -0.45
HDAC7-230ENST00000552960 DGCR6Q14129 220 aa12.24□□□□□ -0.45
HDAC7-230ENST00000552960 SDHAF4Q5VUM1 108 aa12.24□□□□□ -0.45
HDAC7-230ENST00000552960 BLOC1S3Q6QNY0 202 aa12.24□□□□□ -0.45
HDAC7-230ENST00000552960 DNAJC14Q6Y2X3 702 aaPredicted RBP12.24□□□□□ -0.45
HDAC7-230ENST00000552960 KIAA2013Q8IYS2 634 aa12.24□□□□□ -0.45
HDAC7-230ENST00000552960 FNDC5Q8NAU1 212 aa12.24□□□□□ -0.45
HDAC7-230ENST00000552960 OSCP1Q8WVF1 389 aa12.24□□□□□ -0.45
HDAC7-230ENST00000552960 UBXN10Q96LJ8 280 aa12.24□□□□□ -0.45
HDAC7-230ENST00000552960 DOK1Q99704 481 aa12.24□□□□□ -0.45
HDAC7-230ENST00000552960 PRKD2Q9BZL6 878 aa12.24□□□□□ -0.45
HDAC7-230ENST00000552960 SEPT3Q9UH03 358 aa12.24□□□□□ -0.45
HDAC7-230ENST00000552960 PCDHA9Q9Y5H5 950 aa12.24□□□□□ -0.45
HDAC7-230ENST00000552960 SNX5Q9Y5X3 404 aa12.24□□□□□ -0.45
HDAC7-230ENST00000552960 OAS3Q9Y6K5 1087 aaKnown RBP12.24□□□□□ -0.45
HDAC7-230ENST00000552960 NT5C1B-RDH14C9J2C7 533 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms