RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 MAGEA6P43360 314 aa11.29□□□□□ -0.6
TMEM116-218ENST00000552839 TMPRSS15P98073 1019 aa11.29□□□□□ -0.6
TMEM116-218ENST00000552839 CUL1Q13616 776 aa11.29□□□□□ -0.6
TMEM116-218ENST00000552839 NR0B2Q15466 257 aa11.29□□□□□ -0.6
TMEM116-218ENST00000552839 CCDC38Q502W7 563 aa11.29□□□□□ -0.6
TMEM116-218ENST00000552839 PCID2Q5JVF3 399 aa11.29□□□□□ -0.6
TMEM116-218ENST00000552839 TPRG1LQ5T0D9 272 aa11.29□□□□□ -0.6
TMEM116-218ENST00000552839 ZDHHC20Q5W0Z9 365 aa11.29□□□□□ -0.6
TMEM116-218ENST00000552839 DUPD1Q68J44 220 aa11.29□□□□□ -0.6
TMEM116-218ENST00000552839 RAET1GQ6H3X3 334 aa11.29□□□□□ -0.6
TMEM116-218ENST00000552839 LIPIQ6XZB0 460 aa11.29□□□□□ -0.6
TMEM116-218ENST00000552839 PARGQ86W56 976 aa11.29□□□□□ -0.6
TMEM116-218ENST00000552839 NAT8LQ8N9F0 302 aa11.29□□□□□ -0.6
TMEM116-218ENST00000552839 GABPB2Q8TAK5 448 aaPredicted RBP11.29□□□□□ -0.6
TMEM116-218ENST00000552839 BRSK1Q8TDC3 778 aa11.29□□□□□ -0.6
TMEM116-218ENST00000552839 LMX1AQ8TE12 382 aa11.29□□□□□ -0.6
TMEM116-218ENST00000552839 EXTL1Q92935 676 aa11.29□□□□□ -0.6
TMEM116-218ENST00000552839 AP2M1Q96CW1 435 aa11.29□□□□□ -0.6
TMEM116-218ENST00000552839 SERPINB12Q96P63 405 aa11.29□□□□□ -0.6
TMEM116-218ENST00000552839 LYSMD1Q96S90 227 aa11.29□□□□□ -0.6
TMEM116-218ENST00000552839 SPATA16Q9BXB7 569 aa11.29□□□□□ -0.6
TMEM116-218ENST00000552839 FAM129AQ9BZQ8 928 aa11.29□□□□□ -0.6
TMEM116-218ENST00000552839 BPIFA1Q9NP55 256 aa11.29□□□□□ -0.6
TMEM116-218ENST00000552839 CASS4Q9NQ75 786 aa11.29□□□□□ -0.6
TMEM116-218ENST00000552839 STARD5Q9NSY2 213 aa11.29□□□□□ -0.6
TMEM116-218ENST00000552839 NCKIPSDQ9NZQ3 722 aa11.29□□□□□ -0.6
TMEM116-218ENST00000552839 CD84Q9UIB8 345 aa11.29□□□□□ -0.6
TMEM116-218ENST00000552839 PPIL1Q9Y3C6 166 aa11.29□□□□□ -0.6
TMEM116-218ENST00000552839 SPO11Q9Y5K1 396 aa11.29□□□□□ -0.6
TMEM116-218ENST00000552839 SDR42E2A6NKP2 422 aa11.28□□□□□ -0.6
TMEM116-218ENST00000552839 TPP1O14773 563 aa11.28□□□□□ -0.6
TMEM116-218ENST00000552839 SUV39H1O43463 412 aa11.28□□□□□ -0.6
TMEM116-218ENST00000552839 BUD23O43709 281 aaKnown RBP11.28□□□□□ -0.6
TMEM116-218ENST00000552839 PPFIA2O75334 1257 aa11.28□□□□□ -0.6
TMEM116-218ENST00000552839 RECQL5O94762 991 aaPredicted RBP11.28□□□□□ -0.6
TMEM116-218ENST00000552839 PYGLP06737 847 aa11.28□□□□□ -0.6
TMEM116-218ENST00000552839 LHCGRP22888 699 aa11.28□□□□□ -0.6
TMEM116-218ENST00000552839 ADRA1DP25100 572 aa11.28□□□□□ -0.6
TMEM116-218ENST00000552839 MCM3P25205 808 aa11.28□□□□□ -0.6
TMEM116-218ENST00000552839 SLC5A2P31639 672 aa11.28□□□□□ -0.6
TMEM116-218ENST00000552839 ETV3P41162 512 aa11.28□□□□□ -0.6
TMEM116-218ENST00000552839 GRIA1P42261 906 aa11.28□□□□□ -0.6
TMEM116-218ENST00000552839 GPR1P46091 355 aa11.28□□□□□ -0.6
TMEM116-218ENST00000552839 RABIFP47224 123 aa11.28□□□□□ -0.6
TMEM116-218ENST00000552839 STC1P52823 247 aa11.28□□□□□ -0.6
TMEM116-218ENST00000552839 PRAMEP78395 509 aa11.28□□□□□ -0.6
TMEM116-218ENST00000552839 RALGDSQ12967 914 aa11.28□□□□□ -0.6
TMEM116-218ENST00000552839 EIF2B5Q13144 721 aaKnown RBP11.28□□□□□ -0.6
TMEM116-218ENST00000552839 SRSF6Q13247 344 aaKnown RBP11.28□□□□□ -0.6
TMEM116-218ENST00000552839 PDE1CQ14123 709 aaPredicted RBP11.28□□□□□ -0.6
TMEM116-218ENST00000552839 IHHQ14623 411 aa11.28□□□□□ -0.6
TMEM116-218ENST00000552839 LRRC14Q15048 493 aa11.28□□□□□ -0.6
TMEM116-218ENST00000552839 TGIF1Q15583 401 aa11.28□□□□□ -0.6
TMEM116-218ENST00000552839 SKIDA1Q1XH10 827 aa11.28□□□□□ -0.6
TMEM116-218ENST00000552839 CERCAMQ5T4B2 595 aa11.28□□□□□ -0.6
TMEM116-218ENST00000552839 HIBCHQ6NVY1 386 aaPredicted RBP11.28□□□□□ -0.6
TMEM116-218ENST00000552839 XKR5Q6UX68 686 aa11.28□□□□□ -0.6
TMEM116-218ENST00000552839 ATG14Q6ZNE5 492 aa11.28□□□□□ -0.6
TMEM116-218ENST00000552839 KLHDC8BQ8IXV7 354 aa11.28□□□□□ -0.6
TMEM116-218ENST00000552839 SLC35F3Q8IY50 421 aa11.28□□□□□ -0.6
TMEM116-218ENST00000552839 GDAP1Q8TB36 358 aa11.28□□□□□ -0.6
TMEM116-218ENST00000552839 STAMBPL1Q96FJ0 436 aa11.28□□□□□ -0.6
TMEM116-218ENST00000552839 DTD2Q96FN9 168 aa11.28□□□□□ -0.6
TMEM116-218ENST00000552839 CFAP36Q96G28 342 aa11.28□□□□□ -0.6
TMEM116-218ENST00000552839 SMIM14Q96QK8 99 aa11.28□□□□□ -0.6
TMEM116-218ENST00000552839 KLF6Q99612 283 aaPredicted RBP11.28□□□□□ -0.6
TMEM116-218ENST00000552839 BOCQ9BWV1 1114 aa11.28□□□□□ -0.6
TMEM116-218ENST00000552839 CDH19Q9H159 772 aa11.28□□□□□ -0.6
TMEM116-218ENST00000552839 ARNT2Q9HBZ2 717 aa11.28□□□□□ -0.6
TMEM116-218ENST00000552839 SYBUQ9NX95 663 aa11.28□□□□□ -0.6
TMEM116-218ENST00000552839 TCAF1Q9Y4C2 921 aa11.28□□□□□ -0.6
TMEM116-218ENST00000552839 ARL5AQ9Y689 179 aa11.28□□□□□ -0.6
TMEM116-218ENST00000552839 SLC30A1Q9Y6M5 507 aa11.28□□□□□ -0.6
TMEM116-218ENST00000552839 PIEZO2Q9H5I5 2752 aa11.28□□□□□ -0.6
TMEM116-218ENST00000552839 UNC13CQ8NB66 2214 aa11.28□□□□□ -0.6
TMEM116-218ENST00000552839 AHCTF1Q8WYP5 2266 aa11.27□□□□□ -0.61
TMEM116-218ENST00000552839 RGSL1A5PLK6 1076 aa11.27□□□□□ -0.61
TMEM116-218ENST00000552839 NTN3O00634 580 aaPredicted RBP11.27□□□□□ -0.61
TMEM116-218ENST00000552839 NOBOXO60393 691 aa11.27□□□□□ -0.61
TMEM116-218ENST00000552839 POLBP06746 335 aa11.27□□□□□ -0.61
TMEM116-218ENST00000552839 ITGALP20701 1170 aa11.27□□□□□ -0.61
TMEM116-218ENST00000552839 HMGCLP35914 325 aa11.27□□□□□ -0.61
TMEM116-218ENST00000552839 THOP1P52888 689 aa11.27□□□□□ -0.61
TMEM116-218ENST00000552839 CRADDP78560 199 aa11.27□□□□□ -0.61
TMEM116-218ENST00000552839 PDIA2Q13087 525 aaKnown RBP11.27□□□□□ -0.61
TMEM116-218ENST00000552839 C1orf61Q13536 156 aa11.27□□□□□ -0.61
TMEM116-218ENST00000552839 ITGA9Q13797 1035 aa11.27□□□□□ -0.61
TMEM116-218ENST00000552839 SPIDRQ14159 915 aa11.27□□□□□ -0.61
TMEM116-218ENST00000552839 PTPRRQ15256 657 aa11.27□□□□□ -0.61
TMEM116-218ENST00000552839 IRF4Q15306 451 aa11.27□□□□□ -0.61
TMEM116-218ENST00000552839 USP53Q70EK8 1073 aa11.27□□□□□ -0.61
TMEM116-218ENST00000552839 HSD11B1LQ7Z5J1 315 aa11.27□□□□□ -0.61
TMEM116-218ENST00000552839 ZBED8Q8IZ13 594 aa11.27□□□□□ -0.61
TMEM116-218ENST00000552839 NRSN1Q8IZ57 195 aa11.27□□□□□ -0.61
TMEM116-218ENST00000552839 RBFAQ8N0V3 343 aa11.27□□□□□ -0.61
TMEM116-218ENST00000552839 LRRN4CLQ8ND94 238 aa11.27□□□□□ -0.61
TMEM116-218ENST00000552839 DENND6BQ8NEG7 585 aa11.27□□□□□ -0.61
TMEM116-218ENST00000552839 OR4K2Q8NGD2 314 aa11.27□□□□□ -0.61
TMEM116-218ENST00000552839 OR6P1Q8NGX9 317 aa11.27□□□□□ -0.61
TMEM116-218ENST00000552839 WDR48Q8TAF3 677 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms