RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 EPHB1P54762 984 aa6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 DRG2P55039 364 aaKnown RBP6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 CDH6P55285 790 aa6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 TAS2R40P59535 323 aa6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 POLR2LP62875 67 aaKnown RBP6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 SLC25A11Q02978 314 aaKnown RBP6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 HHEXQ03014 270 aa6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 KLHL30Q0D2K2 578 aa6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 CDC20Q12834 499 aa6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 NR1D2Q14995 579 aa6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 ANO6Q4KMQ2 910 aa6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 PRR30Q53SZ7 412 aaPredicted RBP6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 RNFT1Q5M7Z0 435 aa6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 DCAF12Q5T6F0 453 aa6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 MARC1Q5VT66 337 aa6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 PRAMEF17Q5VTA0 474 aa6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 TMEM71Q6P5X7 295 aa6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 SASS6Q6UVJ0 657 aa6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 NPNTQ6UXI9 565 aa6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 FAM92BQ6ZTR7 304 aa6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 ARHGAP22Q7Z5H3 698 aa6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 TMEM151BQ8IW70 566 aa6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 SFRP1Q8N474 314 aa6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 OR6C4Q8NGE1 309 aa6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 C9orf43Q8TAL5 461 aaPredicted RBP6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 ARRDC2Q8TBH0 407 aa6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 STARD8Q92502 1023 aa6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 PPM1MQ96MI6 270 aa6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 MCCC1Q96RQ3 725 aaPredicted RBP6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 PACSIN1Q9BY11 444 aa6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 TRIM55Q9BYV6 548 aa6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 SPRY4Q9C004 299 aa6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 RETREG1Q9H6L5 497 aa6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 BPIFA1Q9NP55 256 aa6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 KLC4Q9NSK0 619 aa6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 RBM22Q9NW64 420 aaKnown RBP eCLIP6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 UBP1Q9NZI7 540 aa6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 AKAP7Q9P0M2 348 aaPredicted RBP6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 TMEM63CQ9P1W3 806 aa6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 ATXN10Q9UBB4 475 aa6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 KCND3Q9UK17 655 aa6.76□□□□□ -1.33
PRPF40B-214ENST00000551320 TEP1Q99973 2627 aaKnown RBP6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 A0A0J9YYE9 177 aa6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 C1orf232A0A0U1RR37 186 aa6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 A1L4Q6 167 aa6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 CFAP69A5D8W1 941 aa6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 PRR19A6NJB7 356 aa6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 MASP2O00187 686 aa6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 PDE2AO00408 941 aaPredicted RBP6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 HGSO14964 777 aaPredicted RBP6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 SOCS5O75159 536 aa6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 KIAA0754O94854 1291 aa6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 JCHAINP01591 159 aa6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 TRBC1P01850 177 aa6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 CYP2A6P11509 494 aaPredicted RBP6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 TNNT1P13805 278 aa6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 GNLYP22749 145 aa6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 COL8A1P27658 744 aa6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 ARL4AP40617 200 aa6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 RENBPP51606 427 aa6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 AIF1P55008 147 aa6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 FOXL2P58012 376 aa6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 MC2RQ01718 297 aa6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 ZBTB17Q13105 803 aa6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 KRT81Q14533 505 aa6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 RFTN1Q14699 578 aaPredicted RBP6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 NFKBIBQ15653 356 aa6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 PCSK7Q16549 785 aa6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 DPYSL2Q16555 572 aa6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 STX1AQ16623 288 aa6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 CPZQ66K79 652 aa6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 NCBP2-AS2Q69YL0 99 aa6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 IYDQ6PHW0 289 aa6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 XKR5Q6UX68 686 aa6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 ADAMTSL4Q6UY14 1074 aa6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 RBM43Q6ZSC3 357 aaKnown RBP6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 USP45Q70EL2 814 aa6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 NLGN4XQ8N0W4 816 aa6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 PQLC3Q8N755 202 aa6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 CNTD1Q8N815 330 aa6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 GPR26Q8NDV2 337 aa6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 NLGN4YQ8NFZ3 816 aaPredicted RBP6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 OR10G6Q8NH81 332 aa6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 RSC1A1Q92681 617 aa6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 SCARF2Q96GP6 870 aaPredicted RBP6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 COX14Q96I36 57 aa6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 PLEKHG4BQ96PX9 1271 aa6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 OR6C1Q96RD1 312 aa6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 NUP85Q9BW27 656 aa6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 ULBP3Q9BZM4 244 aa6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 CDH19Q9H159 772 aa6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 ANO10Q9NW15 660 aa6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 ZFATQ9P243 1243 aa6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 ZNF624Q9P2J8 865 aaPredicted RBP6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 CPNE7Q9UBL6 633 aa6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 FAM8A1Q9UBU6 413 aa6.75□□□□□ -1.33
PRPF40B-214ENST00000551320 ANAPC7Q9UJX3 599 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms