RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 GPR63Q9BZJ6 419 aa21.36■■□□□ 1.01
SMARCC2-210ENST00000550519 NBASA2RRP1 2371 aa21.36■■□□□ 1.01
SMARCC2-210ENST00000550519 VEGFDO43915 354 aa21.35■■□□□ 1.01
SMARCC2-210ENST00000550519 TMEM253P0C7T8 217 aa21.35■■□□□ 1.01
SMARCC2-210ENST00000550519 ZNF28P17035 718 aa21.35■■□□□ 1.01
SMARCC2-210ENST00000550519 AMD1P17707 334 aa21.35■■□□□ 1.01
SMARCC2-210ENST00000550519 TCN2P20062 427 aa21.35■■□□□ 1.01
SMARCC2-210ENST00000550519 F8A1P23610 371 aa21.35■■□□□ 1.01
SMARCC2-210ENST00000550519 NOP2P46087 812 aaKnown RBP21.35■■□□□ 1.01
SMARCC2-210ENST00000550519 FOXM1Q08050 763 aa21.35■■□□□ 1.01
SMARCC2-210ENST00000550519 PDK1Q15118 436 aa21.35■■□□□ 1.01
SMARCC2-210ENST00000550519 DEFB109BQ30KR1 87 aa21.35■■□□□ 1.01
SMARCC2-210ENST00000550519 PLA2G4EQ3MJ16 856 aa21.35■■□□□ 1.01
SMARCC2-210ENST00000550519 KHDC1Q4VXA5 237 aaKnown RBP21.35■■□□□ 1.01
SMARCC2-210ENST00000550519 WASH2PQ6VEQ5 465 aa21.35■■□□□ 1.01
SMARCC2-210ENST00000550519 TRIM48Q8IWZ4 208 aa21.35■■□□□ 1.01
SMARCC2-210ENST00000550519 ABHD17AQ96GS6 310 aa21.35■■□□□ 1.01
SMARCC2-210ENST00000550519 TGM7Q96PF1 710 aa21.35■■□□□ 1.01
SMARCC2-210ENST00000550519 ULBP3Q9BZM4 244 aa21.35■■□□□ 1.01
SMARCC2-210ENST00000550519 ZNF768Q9H5H4 540 aaKnown RBP21.35■■□□□ 1.01
SMARCC2-210ENST00000550519 WASH6PQ9NQA3 447 aa21.35■■□□□ 1.01
SMARCC2-210ENST00000550519 ZNF71Q9NQZ8 489 aaPredicted RBP21.35■■□□□ 1.01
SMARCC2-210ENST00000550519 POT1Q9NUX5 634 aa21.35■■□□□ 1.01
SMARCC2-210ENST00000550519 IFNKQ9P0W0 207 aa21.35■■□□□ 1.01
SMARCC2-210ENST00000550519 DNAJC16Q9Y2G8 782 aa21.35■■□□□ 1.01
SMARCC2-210ENST00000550519 SYCE3A1L190 88 aa21.34■■□□□ 1.01
SMARCC2-210ENST00000550519 PDZK1P1A8MUH7 402 aa21.34■■□□□ 1.01
SMARCC2-210ENST00000550519 APOL1O14791 398 aa21.34■■□□□ 1.01
SMARCC2-210ENST00000550519 MTX2O75431 263 aa21.34■■□□□ 1.01
SMARCC2-210ENST00000550519 CDK14O94921 469 aa21.34■■□□□ 1.01
SMARCC2-210ENST00000550519 SLC4A1P02730 911 aa21.34■■□□□ 1.01
SMARCC2-210ENST00000550519 LEPRP48357 1165 aaKnown RBP21.34■■□□□ 1.01
SMARCC2-210ENST00000550519 SH3BP2P78314 561 aa21.34■■□□□ 1.01
SMARCC2-210ENST00000550519 SRSF1Q07955 248 aaKnown RBP eCLIP21.34■■□□□ 1.01
SMARCC2-210ENST00000550519 PCSK7Q16549 785 aa21.34■■□□□ 1.01
SMARCC2-210ENST00000550519 ATP1A1-AS1Q5TC04 95 aa21.34■■□□□ 1.01
SMARCC2-210ENST00000550519 AGAP9Q5VTM2 703 aa21.34■■□□□ 1.01
SMARCC2-210ENST00000550519 C16orf46Q6P387 395 aa21.34■■□□□ 1.01
SMARCC2-210ENST00000550519 NPNTQ6UXI9 565 aa21.34■■□□□ 1.01
SMARCC2-210ENST00000550519 SPATA22Q8NHS9 363 aa21.34■■□□□ 1.01
SMARCC2-210ENST00000550519 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.34■■□□□ 1.01
SMARCC2-210ENST00000550519 VPS35Q96QK1 796 aa21.34■■□□□ 1.01
SMARCC2-210ENST00000550519 SLC40A1Q9NP59 571 aa21.34■■□□□ 1.01
SMARCC2-210ENST00000550519 TMPRSS11EQ9UL52 423 aa21.34■■□□□ 1.01
SMARCC2-210ENST00000550519 MRPS18BQ9Y676 258 aaKnown RBP21.34■■□□□ 1.01
SMARCC2-210ENST00000550519 AURKAO14965 403 aa21.33■■□□□ 1.01
SMARCC2-210ENST00000550519 PPP1R12AO14974 1030 aaPredicted RBP21.33■■□□□ 1.01
SMARCC2-210ENST00000550519 NDST3O95803 873 aa21.33■■□□□ 1.01
SMARCC2-210ENST00000550519 MT-CYBP00156 380 aaPredicted RBP21.33■■□□□ 1.01
SMARCC2-210ENST00000550519 SEPHS1P49903 392 aa21.33■■□□□ 1.01
SMARCC2-210ENST00000550519 FOXK1P85037 733 aa21.33■■□□□ 1.01
SMARCC2-210ENST00000550519 IL11RAQ14626 422 aa21.33■■□□□ 1.01
SMARCC2-210ENST00000550519 SEPT7Q16181 437 aaKnown RBP21.33■■□□□ 1.01
SMARCC2-210ENST00000550519 C6orf15Q6UXA7 325 aaPredicted RBP21.33■■□□□ 1.01
SMARCC2-210ENST00000550519 PRSS42Q7Z5A4 293 aa21.33■■□□□ 1.01
SMARCC2-210ENST00000550519 C11orf96Q7Z7L8 435 aa21.33■■□□□ 1.01
SMARCC2-210ENST00000550519 RBM12BQ8IXT5 1001 aaKnown RBP21.33■■□□□ 1.01
SMARCC2-210ENST00000550519 SLC35G2Q8TBE7 412 aa21.33■■□□□ 1.01
SMARCC2-210ENST00000550519 RSC1A1Q92681 617 aa21.33■■□□□ 1.01
SMARCC2-210ENST00000550519 OR6C1Q96RD1 312 aa21.33■■□□□ 1.01
SMARCC2-210ENST00000550519 SRPK1Q96SB4 655 aaKnown RBP21.33■■□□□ 1.01
SMARCC2-210ENST00000550519 MAK16Q9BXY0 300 aaKnown RBP21.33■■□□□ 1.01
SMARCC2-210ENST00000550519 GLOD4Q9HC38 313 aa21.33■■□□□ 1.01
SMARCC2-210ENST00000550519 EPHA6Q9UF33 1036 aa21.33■■□□□ 1.01
SMARCC2-210ENST00000550519 SPO11Q9Y5K1 396 aa21.33■■□□□ 1.01
SMARCC2-210ENST00000550519 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.33■■□□□ 1.016e-8■■■■□ 21.9
SMARCC2-210ENST00000550519 LRRK2Q5S007 2527 aa21.32■■□□□ 1
SMARCC2-210ENST00000550519 GOLGA6L3A6NEY3 463 aa21.32■■□□□ 1
SMARCC2-210ENST00000550519 OR52A4PA6NMU1 304 aa21.32■■□□□ 1
SMARCC2-210ENST00000550519 GOLGA6L19H0YKK7 550 aa21.32■■□□□ 1
SMARCC2-210ENST00000550519 ZFXP17010 805 aaPredicted RBP21.32■■□□□ 1
SMARCC2-210ENST00000550519 IDSP22304 550 aa21.32■■□□□ 1
SMARCC2-210ENST00000550519 RPL10P27635 214 aaKnown RBP21.32■■□□□ 1
SMARCC2-210ENST00000550519 CAPZBP47756 277 aa21.32■■□□□ 1
SMARCC2-210ENST00000550519 GPR18Q14330 331 aa21.32■■□□□ 1
SMARCC2-210ENST00000550519 TEX44Q53QW1 395 aa21.32■■□□□ 1
SMARCC2-210ENST00000550519 KLHL6Q8WZ60 621 aa21.32■■□□□ 1
SMARCC2-210ENST00000550519 XPO4Q9C0E2 1151 aaKnown RBP21.32■■□□□ 1
SMARCC2-210ENST00000550519 CROTQ9UKG9 612 aa21.32■■□□□ 1
SMARCC2-210ENST00000550519 KCTD3Q9Y597 815 aa21.32■■□□□ 1
SMARCC2-210ENST00000550519 KCNMB2Q9Y691 235 aa21.32■■□□□ 1
SMARCC2-210ENST00000550519 SSU72P8A0A1W2PR75 194 aa21.31■■□□□ 1
SMARCC2-210ENST00000550519 KIF1CO43896 1103 aaKnown RBP21.31■■□□□ 1
SMARCC2-210ENST00000550519 FGF5P12034 268 aa21.31■■□□□ 1
SMARCC2-210ENST00000550519 DLSTP36957 453 aa21.31■■□□□ 1
SMARCC2-210ENST00000550519 ARHGAP25P42331 645 aa21.31■■□□□ 1
SMARCC2-210ENST00000550519 DRG2P55039 364 aaKnown RBP21.31■■□□□ 1
SMARCC2-210ENST00000550519 TMEM115Q12893 351 aaPredicted RBP21.31■■□□□ 1
SMARCC2-210ENST00000550519 SEPT6Q14141 434 aa21.31■■□□□ 1
SMARCC2-210ENST00000550519 IGFBP7Q16270 282 aa21.31■■□□□ 1
SMARCC2-210ENST00000550519 ATP13A5Q4VNC0 1218 aa21.31■■□□□ 1
SMARCC2-210ENST00000550519 LRRC38Q5VT99 294 aa21.31■■□□□ 1
SMARCC2-210ENST00000550519 CCDC70Q6NSX1 233 aa21.31■■□□□ 1
SMARCC2-210ENST00000550519 B4GALNT4Q76KP1 1039 aa21.31■■□□□ 1
SMARCC2-210ENST00000550519 GALNT6Q8NCL4 622 aa21.31■■□□□ 1
SMARCC2-210ENST00000550519 RNF31Q96EP0 1072 aa21.31■■□□□ 1
SMARCC2-210ENST00000550519 TEKT5Q96M29 485 aa21.31■■□□□ 1
SMARCC2-210ENST00000550519 DNAJC7Q99615 494 aa21.31■■□□□ 1
SMARCC2-210ENST00000550519 RAB33BQ9H082 229 aa21.31■■□□□ 1
SMARCC2-210ENST00000550519 PCDHB3Q9Y5E6 796 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms