RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 SCG3Q8WXD2 468 aaKnown RBP11.75□□□□□ -0.53
PFDN5-208ENST00000549995 SEC14L1Q92503 715 aa11.75□□□□□ -0.53
PFDN5-208ENST00000549995 KRT12Q99456 494 aa11.75□□□□□ -0.53
PFDN5-208ENST00000549995 CHRAC1Q9NRG0 131 aa11.75□□□□□ -0.53
PFDN5-208ENST00000549995 EVA1BQ9NVM1 165 aa11.75□□□□□ -0.53
PFDN5-208ENST00000549995 TAAR2Q9P1P5 351 aa11.75□□□□□ -0.53
PFDN5-208ENST00000549995 SLC2A6Q9UGQ3 507 aa11.75□□□□□ -0.53
PFDN5-208ENST00000549995 ASIC3Q9UHC3 531 aa11.75□□□□□ -0.53
PFDN5-208ENST00000549995 SLC30A1Q9Y6M5 507 aa11.75□□□□□ -0.53
PFDN5-208ENST00000549995 CEP295Q9C0D2 2601 aa11.74□□□□□ -0.53
PFDN5-208ENST00000549995 SPAARA0A1B0GVQ0 90 aa11.74□□□□□ -0.53
PFDN5-208ENST00000549995 CCL22O00626 93 aa11.74□□□□□ -0.53
PFDN5-208ENST00000549995 FFAR2O15552 330 aa11.74□□□□□ -0.53
PFDN5-208ENST00000549995 CDK14O94921 469 aa11.74□□□□□ -0.53
PFDN5-208ENST00000549995 ASMTLO95671 621 aa11.74□□□□□ -0.53
PFDN5-208ENST00000549995 GSTM1P09488 218 aa11.74□□□□□ -0.53
PFDN5-208ENST00000549995 FASLGP48023 281 aa11.74□□□□□ -0.53
PFDN5-208ENST00000549995 ARCN1P48444 511 aaKnown RBP11.74□□□□□ -0.53
PFDN5-208ENST00000549995 PRLHRP49683 370 aa11.74□□□□□ -0.53
PFDN5-208ENST00000549995 CTSCP53634 463 aa11.74□□□□□ -0.53
PFDN5-208ENST00000549995 SIM1P81133 766 aaPredicted RBP11.74□□□□□ -0.53
PFDN5-208ENST00000549995 GSTM4Q03013 218 aa11.74□□□□□ -0.53
PFDN5-208ENST00000549995 DBN1Q16643 649 aa11.74□□□□□ -0.53
PFDN5-208ENST00000549995 KCTD19Q17RG1 926 aaPredicted RBP11.74□□□□□ -0.53
PFDN5-208ENST00000549995 ZNF648Q5T619 568 aaPredicted RBP11.74□□□□□ -0.53
PFDN5-208ENST00000549995 AGAP9Q5VTM2 703 aa11.74□□□□□ -0.53
PFDN5-208ENST00000549995 LYPLAL1Q5VWZ2 237 aa11.74□□□□□ -0.53
PFDN5-208ENST00000549995 IZUMO3Q5VZ72 239 aa11.74□□□□□ -0.53
PFDN5-208ENST00000549995 WASH2PQ6VEQ5 465 aa11.74□□□□□ -0.53
PFDN5-208ENST00000549995 CERS6Q6ZMG9 384 aa11.74□□□□□ -0.53
PFDN5-208ENST00000549995 MAATS1Q7Z4T9 603 aa11.74□□□□□ -0.53
PFDN5-208ENST00000549995 SLCO6A1Q86UG4 719 aa11.74□□□□□ -0.53
PFDN5-208ENST00000549995 SERPINA9Q86WD7 417 aa11.74□□□□□ -0.53
PFDN5-208ENST00000549995 MPP5Q8N3R9 675 aa11.74□□□□□ -0.53
PFDN5-208ENST00000549995 RASGEF1AQ8N9B8 481 aa11.74□□□□□ -0.53
PFDN5-208ENST00000549995 KYQ8NBH2 561 aa11.74□□□□□ -0.53
PFDN5-208ENST00000549995 GPR150Q8NGU9 434 aa11.74□□□□□ -0.53
PFDN5-208ENST00000549995 GLMNQ92990 594 aa11.74□□□□□ -0.53
PFDN5-208ENST00000549995 SNF8Q96H20 258 aa11.74□□□□□ -0.53
PFDN5-208ENST00000549995 COPS8Q99627 209 aa11.74□□□□□ -0.53
PFDN5-208ENST00000549995 ERP44Q9BS26 406 aa11.74□□□□□ -0.53
PFDN5-208ENST00000549995 TRIM51Q9BSJ1 452 aa11.74□□□□□ -0.53
PFDN5-208ENST00000549995 PHACTR1Q9C0D0 580 aa11.74□□□□□ -0.53
PFDN5-208ENST00000549995 SUDS3Q9H7L9 328 aaPredicted RBP11.74□□□□□ -0.53
PFDN5-208ENST00000549995 WASH6PQ9NQA3 447 aa11.74□□□□□ -0.53
PFDN5-208ENST00000549995 SPATS2LQ9NUQ6 558 aaKnown RBP11.74□□□□□ -0.53
PFDN5-208ENST00000549995 GULP1Q9UBP9 304 aa11.74□□□□□ -0.53
PFDN5-208ENST00000549995 CRLS1Q9UJA2 301 aa11.74□□□□□ -0.53
PFDN5-208ENST00000549995 APOBEC2Q9Y235 224 aaKnown RBP11.74□□□□□ -0.53
PFDN5-208ENST00000549995 ZCWPW2A0A1B0GU75 182 aa11.73□□□□□ -0.53
PFDN5-208ENST00000549995 C17orf113A0A1B0GUU1 675 aa11.73□□□□□ -0.53
PFDN5-208ENST00000549995 SDR42E2A6NKP2 422 aa11.73□□□□□ -0.53
PFDN5-208ENST00000549995 E7ESA3 106 aa11.73□□□□□ -0.53
PFDN5-208ENST00000549995 QSOX1O00391 747 aa11.73□□□□□ -0.53
PFDN5-208ENST00000549995 SPTBN2O15020 2390 aa11.73□□□□□ -0.53
PFDN5-208ENST00000549995 RAD51CO43502 376 aa11.73□□□□□ -0.53
PFDN5-208ENST00000549995 AVILO75366 819 aa11.73□□□□□ -0.53
PFDN5-208ENST00000549995 MTX2O75431 263 aa11.73□□□□□ -0.53
PFDN5-208ENST00000549995 RFPL3O75679 317 aa11.73□□□□□ -0.53
PFDN5-208ENST00000549995 USP1O94782 785 aa11.73□□□□□ -0.53
PFDN5-208ENST00000549995 AP2A2O94973 939 aa11.73□□□□□ -0.53
PFDN5-208ENST00000549995 GOT2P00505 430 aaKnown RBP11.73□□□□□ -0.53
PFDN5-208ENST00000549995 ZNF7P17097 686 aaPredicted RBP11.73□□□□□ -0.53
PFDN5-208ENST00000549995 AK4P27144 223 aaPredicted RBP11.73□□□□□ -0.53
PFDN5-208ENST00000549995 NMBRP28336 390 aa11.73□□□□□ -0.53
PFDN5-208ENST00000549995 ACTR1BP42025 376 aa11.73□□□□□ -0.53
PFDN5-208ENST00000549995 RPL21P46778 160 aaKnown RBP11.73□□□□□ -0.53
PFDN5-208ENST00000549995 RPIAP49247 311 aa11.73□□□□□ -0.53
PFDN5-208ENST00000549995 RP1P56715 2156 aa11.73□□□□□ -0.53
PFDN5-208ENST00000549995 ACTR1AP61163 376 aa11.73□□□□□ -0.53
PFDN5-208ENST00000549995 CRADDP78560 199 aa11.73□□□□□ -0.53
PFDN5-208ENST00000549995 TMPRSS15P98073 1019 aa11.73□□□□□ -0.53
PFDN5-208ENST00000549995 SHC2P98077 582 aa11.73□□□□□ -0.53
PFDN5-208ENST00000549995 C2orf54Q08AI8 447 aa11.73□□□□□ -0.53
PFDN5-208ENST00000549995 DNAJC3Q13217 504 aa11.73□□□□□ -0.53
PFDN5-208ENST00000549995 GTF2H3Q13889 308 aa11.73□□□□□ -0.53
PFDN5-208ENST00000549995 NR0B2Q15466 257 aa11.73□□□□□ -0.53
PFDN5-208ENST00000549995 SMAD1Q15797 465 aaKnown RBP11.73□□□□□ -0.53
PFDN5-208ENST00000549995 TYSND1Q2T9J0 566 aa11.73□□□□□ -0.53
PFDN5-208ENST00000549995 C14orf28Q4W4Y0 310 aa11.73□□□□□ -0.53
PFDN5-208ENST00000549995 N4BP2L1Q5TBK1 243 aaPredicted RBP11.73□□□□□ -0.53
PFDN5-208ENST00000549995 DUPD1Q68J44 220 aa11.73□□□□□ -0.53
PFDN5-208ENST00000549995 MARK2Q7KZI7 788 aaKnown RBP11.73□□□□□ -0.53
PFDN5-208ENST00000549995 RD3Q7Z3Z2 195 aa11.73□□□□□ -0.53
PFDN5-208ENST00000549995 TAF8Q7Z7C8 310 aa11.73□□□□□ -0.53
PFDN5-208ENST00000549995 NAGSQ8N159 534 aa11.73□□□□□ -0.53
PFDN5-208ENST00000549995 SFRP1Q8N474 314 aa11.73□□□□□ -0.53
PFDN5-208ENST00000549995 OR4L1Q8NH43 312 aa11.73□□□□□ -0.53
PFDN5-208ENST00000549995 NAT6Q93015 286 aa11.73□□□□□ -0.53
PFDN5-208ENST00000549995 HDAC10Q969S8 669 aa11.73□□□□□ -0.53
PFDN5-208ENST00000549995 LRRC39Q96DD0 335 aa11.73□□□□□ -0.53
PFDN5-208ENST00000549995 MFSD3Q96ES6 412 aa11.73□□□□□ -0.53
PFDN5-208ENST00000549995 CCDC97Q96F63 343 aaPredicted RBP11.73□□□□□ -0.53
PFDN5-208ENST00000549995 ASXL3Q9C0F0 2248 aa11.73□□□□□ -0.53
PFDN5-208ENST00000549995 ARFGAP3Q9NP61 516 aa11.73□□□□□ -0.53
PFDN5-208ENST00000549995 WHRNQ9P202 907 aa11.73□□□□□ -0.53
PFDN5-208ENST00000549995 SLC23A2Q9UGH3 650 aa11.73□□□□□ -0.53
PFDN5-208ENST00000549995 PLEKHM1Q9Y4G2 1056 aa11.73□□□□□ -0.53
PFDN5-208ENST00000549995 GPSM3Q9Y4H4 160 aa11.73□□□□□ -0.53
PFDN5-208ENST00000549995 OR51F1A6NGY5 319 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms