RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 LRRN4Q8WUT4 740 aa12.05□□□□□ -0.48
DDX54-206ENST00000549271 MAML1Q92585 1016 aa12.05□□□□□ -0.48
DDX54-206ENST00000549271 AP2M1Q96CW1 435 aa12.05□□□□□ -0.48
DDX54-206ENST00000549271 COX14Q96I36 57 aa12.05□□□□□ -0.48
DDX54-206ENST00000549271 TSGA13Q96PP4 275 aa12.05□□□□□ -0.48
DDX54-206ENST00000549271 RNF157Q96PX1 679 aa12.05□□□□□ -0.48
DDX54-206ENST00000549271 OR2M4Q96R27 311 aa12.05□□□□□ -0.48
DDX54-206ENST00000549271 TWSG1Q9GZX9 223 aa12.05□□□□□ -0.48
DDX54-206ENST00000549271 ABCG8Q9H221 673 aa12.05□□□□□ -0.48
DDX54-206ENST00000549271 AMACRQ9UHK6 382 aa12.05□□□□□ -0.48
DDX54-206ENST00000549271 DNPEPQ9ULA0 475 aa12.05□□□□□ -0.48
DDX54-206ENST00000549271 POLEQ07864 2286 aa12.05□□□□□ -0.48
DDX54-206ENST00000549271 A0A0J9YYE9 177 aa12.04□□□□□ -0.48
DDX54-206ENST00000549271 MATN3O15232 486 aa12.04□□□□□ -0.48
DDX54-206ENST00000549271 KATNA1O75449 491 aa12.04□□□□□ -0.48
DDX54-206ENST00000549271 CBX6O95503 412 aa12.04□□□□□ -0.48
DDX54-206ENST00000549271 TRBC1P01850 177 aa12.04□□□□□ -0.48
DDX54-206ENST00000549271 PDHA1P08559 390 aa12.04□□□□□ -0.48
DDX54-206ENST00000549271 CCNCP24863 283 aa12.04□□□□□ -0.48
DDX54-206ENST00000549271 VARSP26640 1264 aaKnown RBP12.04□□□□□ -0.48
DDX54-206ENST00000549271 ACTR1BP42025 376 aa12.04□□□□□ -0.48
DDX54-206ENST00000549271 MAGEA1P43355 309 aa12.04□□□□□ -0.48
DDX54-206ENST00000549271 NOP2P46087 812 aaKnown RBP12.04□□□□□ -0.48
DDX54-206ENST00000549271 LEPRP48357 1165 aaKnown RBP12.04□□□□□ -0.48
DDX54-206ENST00000549271 ACTR1AP61163 376 aa12.04□□□□□ -0.48
DDX54-206ENST00000549271 PTSQ03393 145 aa12.04□□□□□ -0.48
DDX54-206ENST00000549271 IFI16Q16666 785 aaKnown RBP12.04□□□□□ -0.48
DDX54-206ENST00000549271 LRRC38Q5VT99 294 aa12.04□□□□□ -0.48
DDX54-206ENST00000549271 LRRC66Q68CR7 880 aa12.04□□□□□ -0.48
DDX54-206ENST00000549271 C6orf15Q6UXA7 325 aaPredicted RBP12.04□□□□□ -0.48
DDX54-206ENST00000549271 LYSMD3Q7Z3D4 306 aa12.04□□□□□ -0.48
DDX54-206ENST00000549271 ZNF761Q86XN6 746 aaPredicted RBP12.04□□□□□ -0.48
DDX54-206ENST00000549271 SFRP1Q8N474 314 aa12.04□□□□□ -0.48
DDX54-206ENST00000549271 PLD5Q8N7P1 536 aa12.04□□□□□ -0.48
DDX54-206ENST00000549271 OR10G6Q8NH81 332 aa12.04□□□□□ -0.48
DDX54-206ENST00000549271 EXD1Q8NHP7 514 aa12.04□□□□□ -0.48
DDX54-206ENST00000549271 AHCYL2Q96HN2 611 aaKnown RBP12.04□□□□□ -0.48
DDX54-206ENST00000549271 MRFAP1L1Q96HT8 127 aa12.04□□□□□ -0.48
DDX54-206ENST00000549271 LYSMD1Q96S90 227 aa12.04□□□□□ -0.48
DDX54-206ENST00000549271 SLC25A23Q9BV35 468 aa12.04□□□□□ -0.48
DDX54-206ENST00000549271 ULBP3Q9BZM4 244 aa12.04□□□□□ -0.48
DDX54-206ENST00000549271 UNKQ9C0B0 810 aaKnown RBP12.04□□□□□ -0.48
DDX54-206ENST00000549271 POLR1EQ9GZS1 481 aaKnown RBP12.04□□□□□ -0.48
DDX54-206ENST00000549271 ZMYND15Q9H091 742 aa12.04□□□□□ -0.48
DDX54-206ENST00000549271 SUDS3Q9H7L9 328 aaPredicted RBP12.04□□□□□ -0.48
DDX54-206ENST00000549271 NT5MQ9NPB1 228 aa12.04□□□□□ -0.48
DDX54-206ENST00000549271 DTLQ9NZJ0 730 aa12.04□□□□□ -0.48
DDX54-206ENST00000549271 KCND3Q9UK17 655 aa12.04□□□□□ -0.48
DDX54-206ENST00000549271 TFR2Q9UP52 801 aa12.04□□□□□ -0.48
DDX54-206ENST00000549271 ENTPD4Q9Y227 616 aa12.04□□□□□ -0.48
DDX54-206ENST00000549271 HYOU1Q9Y4L1 999 aa12.04□□□□□ -0.48
DDX54-206ENST00000549271 PIPSLA2A3N6 862 aa12.03□□□□□ -0.48
DDX54-206ENST00000549271 ZNF487B1APH4 448 aa12.03□□□□□ -0.48
DDX54-206ENST00000549271 CTPS1P17812 591 aa12.03□□□□□ -0.48
DDX54-206ENST00000549271 COMTP21964 271 aa12.03□□□□□ -0.48
DDX54-206ENST00000549271 FECHP22830 423 aa12.03□□□□□ -0.48
DDX54-206ENST00000549271 SLC1A1P43005 524 aa12.03□□□□□ -0.48
DDX54-206ENST00000549271 STC1P52823 247 aa12.03□□□□□ -0.48
DDX54-206ENST00000549271 HADHBP55084 474 aaKnown RBP12.03□□□□□ -0.48
DDX54-206ENST00000549271 RPL26P61254 145 aaKnown RBP12.03□□□□□ -0.48
DDX54-206ENST00000549271 NAA30Q147X3 362 aaPredicted RBP12.03□□□□□ -0.48
DDX54-206ENST00000549271 PTPRRQ15256 657 aa12.03□□□□□ -0.48
DDX54-206ENST00000549271 NR6A1Q15406 480 aa12.03□□□□□ -0.48
DDX54-206ENST00000549271 ZRANB3Q5FWF4 1079 aa12.03□□□□□ -0.48
DDX54-206ENST00000549271 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.03□□□□□ -0.48
DDX54-206ENST00000549271 SLC9A4Q6AI14 798 aa12.03□□□□□ -0.48
DDX54-206ENST00000549271 RFLNAQ6ZTI6 216 aa12.03□□□□□ -0.48
DDX54-206ENST00000549271 VSIG1Q86XK7 387 aa12.03□□□□□ -0.48
DDX54-206ENST00000549271 CCDC170Q8IYT3 715 aa12.03□□□□□ -0.48
DDX54-206ENST00000549271 GALNT6Q8NCL4 622 aa12.03□□□□□ -0.48
DDX54-206ENST00000549271 SCAMP4Q969E2 229 aa12.03□□□□□ -0.48
DDX54-206ENST00000549271 PANX2Q96RD6 677 aa12.03□□□□□ -0.48
DDX54-206ENST00000549271 VPS18Q9P253 973 aa12.03□□□□□ -0.48
DDX54-206ENST00000549271 RPL26L1Q9UNX3 145 aaKnown RBP12.03□□□□□ -0.48
DDX54-206ENST00000549271 PLEKHM1Q9Y4G2 1056 aa12.03□□□□□ -0.48
DDX54-206ENST00000549271 PCDHA13Q9Y5I0 950 aa12.03□□□□□ -0.48
DDX54-206ENST00000549271 CCDC168Q8NDH2 2452 aa12.03□□□□□ -0.48
DDX54-206ENST00000549271 DNHD1Q96M86 4753 aa12.02□□□□□ -0.48
DDX54-206ENST00000549271 PCNX1Q96RV3 2341 aa12.02□□□□□ -0.49
DDX54-206ENST00000549271 ARHGAP10A1A4S6 786 aa12.02□□□□□ -0.49
DDX54-206ENST00000549271 LRRD1A4D1F6 860 aa12.02□□□□□ -0.49
DDX54-206ENST00000549271 A6NCN8 305 aa12.02□□□□□ -0.49
DDX54-206ENST00000549271 GOLGA6CA6NDK9 693 aa12.02□□□□□ -0.49
DDX54-206ENST00000549271 GOLGA6BA6NDN3 693 aa12.02□□□□□ -0.49
DDX54-206ENST00000549271 GOLGA6L3A6NEY3 463 aa12.02□□□□□ -0.49
DDX54-206ENST00000549271 PRLP01236 227 aa12.02□□□□□ -0.49
DDX54-206ENST00000549271 GOLGA6DP0CG33 693 aa12.02□□□□□ -0.49
DDX54-206ENST00000549271 FAM182AQ5T1J6 154 aa12.02□□□□□ -0.49
DDX54-206ENST00000549271 ZFYVE27Q5T4F4 411 aa12.02□□□□□ -0.49
DDX54-206ENST00000549271 CPZQ66K79 652 aa12.02□□□□□ -0.49
DDX54-206ENST00000549271 TIGD7Q6NT04 549 aaPredicted RBP12.02□□□□□ -0.49
DDX54-206ENST00000549271 DOK6Q6PKX4 331 aa12.02□□□□□ -0.49
DDX54-206ENST00000549271 GALNT13Q8IUC8 556 aa12.02□□□□□ -0.49
DDX54-206ENST00000549271 ARRDC2Q8TBH0 407 aa12.02□□□□□ -0.49
DDX54-206ENST00000549271 SLC37A2Q8TED4 501 aa12.02□□□□□ -0.49
DDX54-206ENST00000549271 C19orf60Q96EN9 201 aa12.02□□□□□ -0.49
DDX54-206ENST00000549271 SLC38A3Q99624 504 aa12.02□□□□□ -0.49
DDX54-206ENST00000549271 TDRD1Q9BXT4 1180 aaKnown RBP12.02□□□□□ -0.49
DDX54-206ENST00000549271 RMI1Q9H9A7 625 aa12.02□□□□□ -0.49
DDX54-206ENST00000549271 SARS2Q9NP81 518 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms