RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 DNAJC1Q96KC8 554 aaKnown RBP15.56■□□□□ 0.08
DDX54-205ENST00000548786 FRMD8P1Q9BZ68 369 aaPredicted RBP15.56■□□□□ 0.08
DDX54-205ENST00000548786 ASB8Q9H765 288 aa15.56■□□□□ 0.08
DDX54-205ENST00000548786 RAB6BQ9NRW1 208 aa15.56■□□□□ 0.08
DDX54-205ENST00000548786 KIF26BQ2KJY2 2108 aa15.56■□□□□ 0.08
DDX54-205ENST00000548786 LAMA5O15230 3695 aa15.56■□□□□ 0.08
DDX54-205ENST00000548786 ZNF106Q9H2Y7 1883 aaKnown RBP15.55■□□□□ 0.08
DDX54-205ENST00000548786 PDZK1P1A8MUH7 402 aa15.55■□□□□ 0.08
DDX54-205ENST00000548786 CHUKO15111 745 aa15.55■□□□□ 0.08
DDX54-205ENST00000548786 LDB2O43679 373 aa15.55■□□□□ 0.08
DDX54-205ENST00000548786 TLX3O43711 291 aaPredicted RBP15.55■□□□□ 0.08
DDX54-205ENST00000548786 PPFIA2O75334 1257 aa15.55■□□□□ 0.08
DDX54-205ENST00000548786 SRP72O76094 671 aaKnown RBP15.55■□□□□ 0.08
DDX54-205ENST00000548786 HGFP14210 728 aa15.55■□□□□ 0.08
DDX54-205ENST00000548786 MPSTP25325 297 aa15.55■□□□□ 0.08
DDX54-205ENST00000548786 RPL10P27635 214 aaKnown RBP15.55■□□□□ 0.08
DDX54-205ENST00000548786 STIP1P31948 543 aaKnown RBP15.55■□□□□ 0.08
DDX54-205ENST00000548786 GRIA1P42261 906 aa15.55■□□□□ 0.08
DDX54-205ENST00000548786 MAPK9P45984 424 aa15.55■□□□□ 0.08
DDX54-205ENST00000548786 DRG2P55039 364 aaKnown RBP15.55■□□□□ 0.08
DDX54-205ENST00000548786 INHBCP55103 352 aa15.55■□□□□ 0.08
DDX54-205ENST00000548786 CCNG2Q16589 344 aa15.55■□□□□ 0.08
DDX54-205ENST00000548786 LDLRAP1Q5SW96 308 aa15.55■□□□□ 0.08
DDX54-205ENST00000548786 C19orf48Q6RUI8 117 aa15.55■□□□□ 0.08
DDX54-205ENST00000548786 PPP1R21Q6ZMI0 780 aa15.55■□□□□ 0.08
DDX54-205ENST00000548786 REXO1L1PQ8IX06 675 aa15.55■□□□□ 0.08
DDX54-205ENST00000548786 KLHDC8BQ8IXV7 354 aa15.55■□□□□ 0.08
DDX54-205ENST00000548786 SFRP1Q8N474 314 aa15.55■□□□□ 0.08
DDX54-205ENST00000548786 BEND7Q8N7W2 519 aaPredicted RBP15.55■□□□□ 0.08
DDX54-205ENST00000548786 DNAAF3Q8N9W5 541 aa15.55■□□□□ 0.08
DDX54-205ENST00000548786 NAF1Q96HR8 494 aaKnown RBP15.55■□□□□ 0.08
DDX54-205ENST00000548786 SLC38A3Q99624 504 aa15.55■□□□□ 0.08
DDX54-205ENST00000548786 NUDT22Q9BRQ3 303 aa15.55■□□□□ 0.08
DDX54-205ENST00000548786 SEMA6CQ9H3T2 930 aa15.55■□□□□ 0.08
DDX54-205ENST00000548786 POLR1BQ9H9Y6 1135 aa15.55■□□□□ 0.08
DDX54-205ENST00000548786 KCNK4Q9NYG8 393 aa15.55■□□□□ 0.08
DDX54-205ENST00000548786 SMARCAL1Q9NZC9 954 aa15.55■□□□□ 0.08
DDX54-205ENST00000548786 SCHIP1Q9P0W5 487 aaPredicted RBP15.55■□□□□ 0.08
DDX54-205ENST00000548786 CRLS1Q9UJA2 301 aa15.55■□□□□ 0.08
DDX54-205ENST00000548786 CFAP47Q6ZTR5 3102 aa15.54■□□□□ 0.08
DDX54-205ENST00000548786 UNC13CQ8NB66 2214 aa15.54■□□□□ 0.08
DDX54-205ENST00000548786 GPR89AB7ZAQ6 455 aa15.54■□□□□ 0.08
DDX54-205ENST00000548786 GPR89BP0CG08 455 aa15.54■□□□□ 0.08
DDX54-205ENST00000548786 PRSS56P0CW18 603 aa15.54■□□□□ 0.08
DDX54-205ENST00000548786 F3P13726 295 aa15.54■□□□□ 0.08
DDX54-205ENST00000548786 PNLIPP16233 465 aa15.54■□□□□ 0.08
DDX54-205ENST00000548786 MSH3P20585 1137 aa15.54■□□□□ 0.08
DDX54-205ENST00000548786 MC4RP32245 332 aa15.54■□□□□ 0.08
DDX54-205ENST00000548786 RPL22P35268 128 aaKnown RBP15.54■□□□□ 0.08
DDX54-205ENST00000548786 CDKN1CP49918 316 aaPredicted RBP15.54■□□□□ 0.08
DDX54-205ENST00000548786 XIAPP98170 497 aa15.54■□□□□ 0.08
DDX54-205ENST00000548786 HHEXQ03014 270 aa15.54■□□□□ 0.08
DDX54-205ENST00000548786 TRIP13Q15645 432 aaPredicted RBP15.54■□□□□ 0.08
DDX54-205ENST00000548786 ZRANB3Q5FWF4 1079 aa15.54■□□□□ 0.08
DDX54-205ENST00000548786 FNBP1LQ5T0N5 605 aa15.54■□□□□ 0.08
DDX54-205ENST00000548786 IYDQ6PHW0 289 aa15.54■□□□□ 0.08
DDX54-205ENST00000548786 TMEM220Q6QAJ8 160 aa15.54■□□□□ 0.08
DDX54-205ENST00000548786 ZNF438Q7Z4V0 828 aa15.54■□□□□ 0.08
DDX54-205ENST00000548786 SLC35F6Q8N357 371 aa15.54■□□□□ 0.08
DDX54-205ENST00000548786 DDHD1Q8NEL9 900 aa15.54■□□□□ 0.08
DDX54-205ENST00000548786 UBE2Q2Q8WVN8 375 aa15.54■□□□□ 0.08
DDX54-205ENST00000548786 HNRNPLLQ8WVV9 542 aaKnown RBP15.54■□□□□ 0.08
DDX54-205ENST00000548786 SGF29Q96ES7 293 aa15.54■□□□□ 0.08
DDX54-205ENST00000548786 ZCCHC2Q9C0B9 1178 aaKnown RBP15.54■□□□□ 0.08
DDX54-205ENST00000548786 ARNT2Q9HBZ2 717 aa15.54■□□□□ 0.08
DDX54-205ENST00000548786 DKK4Q9UBT3 224 aa15.54■□□□□ 0.08
DDX54-205ENST00000548786 FEZ2Q9UHY8 353 aaPredicted RBP15.54■□□□□ 0.08
DDX54-205ENST00000548786 NBEAQ8NFP9 2946 aa15.54■□□□□ 0.08
DDX54-205ENST00000548786 CCDC187A0A096LP49 1063 aa15.53■□□□□ 0.08
DDX54-205ENST00000548786 PRAMEF33A0A0G2JMD5 474 aa15.53■□□□□ 0.08
DDX54-205ENST00000548786 A6NCN8 305 aa15.53■□□□□ 0.08
DDX54-205ENST00000548786 USP27XA6NNY8 438 aa15.53■□□□□ 0.08
DDX54-205ENST00000548786 PSMD3O43242 534 aa15.53■□□□□ 0.08
DDX54-205ENST00000548786 ZSCAN12O43309 604 aa15.53■□□□□ 0.08
DDX54-205ENST00000548786 APRTP07741 180 aa15.53■□□□□ 0.08
DDX54-205ENST00000548786 CD1CP29017 333 aa15.53■□□□□ 0.08
DDX54-205ENST00000548786 CSF2RBP32927 897 aa15.53■□□□□ 0.08
DDX54-205ENST00000548786 FDFT1P37268 417 aa15.53■□□□□ 0.08
DDX54-205ENST00000548786 LSSP48449 732 aa15.53■□□□□ 0.08
DDX54-205ENST00000548786 PDE1BQ01064 536 aa15.53■□□□□ 0.08
DDX54-205ENST00000548786 CCDC173Q0VFZ6 552 aa15.53■□□□□ 0.08
DDX54-205ENST00000548786 C11orf96Q7Z7L8 435 aa15.53■□□□□ 0.08
DDX54-205ENST00000548786 LINC00523Q86TU6 105 aa15.53■□□□□ 0.08
DDX54-205ENST00000548786 TRIM48Q8IWZ4 208 aa15.53■□□□□ 0.08
DDX54-205ENST00000548786 RCBTB1Q8NDN9 531 aa15.53■□□□□ 0.08
DDX54-205ENST00000548786 MAIP1Q8WWC4 291 aa15.53■□□□□ 0.08
DDX54-205ENST00000548786 TIMM29Q9BSF4 260 aa15.53■□□□□ 0.08
DDX54-205ENST00000548786 AP1M1Q9BXS5 423 aa15.53■□□□□ 0.08
DDX54-205ENST00000548786 STRADBQ9C0K7 418 aa15.53■□□□□ 0.08
DDX54-205ENST00000548786 TMEM9Q9P0T7 183 aa15.53■□□□□ 0.08
DDX54-205ENST00000548786 PAK5Q9P286 719 aa15.53■□□□□ 0.08
DDX54-205ENST00000548786 RALYQ9UKM9 306 aaKnown RBP15.53■□□□□ 0.08
DDX54-205ENST00000548786 PSMD13Q9UNM6 376 aa15.53■□□□□ 0.08
DDX54-205ENST00000548786 JRKLQ9Y4A0 524 aa15.53■□□□□ 0.08
DDX54-205ENST00000548786 SLC30A1Q9Y6M5 507 aa15.53■□□□□ 0.08
DDX54-205ENST00000548786 IGHV1OR21-1A0A087WYE8 117 aa15.52■□□□□ 0.08
DDX54-205ENST00000548786 OR51F1A6NGY5 319 aa15.52■□□□□ 0.08
DDX54-205ENST00000548786 OR52A4PA6NMU1 304 aa15.52■□□□□ 0.08
DDX54-205ENST00000548786 POP7O75817 140 aaKnown RBP15.52■□□□□ 0.08
DDX54-205ENST00000548786 TNFSF15O95150 251 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms