RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 BMPR2Q13873 1038 aa15.65■□□□□ 0.1
TRAFD1-203ENST00000547063 WDR45BQ5MNZ6 344 aa15.65■□□□□ 0.1
TRAFD1-203ENST00000547063 HECTD2Q5U5R9 776 aa15.65■□□□□ 0.1
TRAFD1-203ENST00000547063 KYAT3Q6YP21 454 aaKnown RBP15.65■□□□□ 0.1
TRAFD1-203ENST00000547063 TRABD2AQ86V40 505 aa15.65■□□□□ 0.1
TRAFD1-203ENST00000547063 PELI3Q8N2H9 469 aa15.65■□□□□ 0.1
TRAFD1-203ENST00000547063 FRMD1Q8N878 549 aa15.65■□□□□ 0.1
TRAFD1-203ENST00000547063 TMEM145Q8NBT3 493 aa15.65■□□□□ 0.1
TRAFD1-203ENST00000547063 GAB3Q8WWW8 586 aa15.65■□□□□ 0.1
TRAFD1-203ENST00000547063 ISL2Q96A47 359 aa15.65■□□□□ 0.1
TRAFD1-203ENST00000547063 ALKBH8Q96BT7 664 aaKnown RBP15.65■□□□□ 0.1
TRAFD1-203ENST00000547063 ATP6V1G3Q96LB4 118 aa15.65■□□□□ 0.1
TRAFD1-203ENST00000547063 RMI1Q9H9A7 625 aa15.65■□□□□ 0.1
TRAFD1-203ENST00000547063 POPDC3Q9HBV1 291 aa15.65■□□□□ 0.1
TRAFD1-203ENST00000547063 TLK1Q9UKI8 766 aa15.65■□□□□ 0.1
TRAFD1-203ENST00000547063 GPR34Q9UPC5 381 aa15.65■□□□□ 0.1
TRAFD1-203ENST00000547063 INVSQ9Y283 1065 aa15.65■□□□□ 0.1
TRAFD1-203ENST00000547063 TRIOO75962 3097 aa15.65■□□□□ 0.1
TRAFD1-203ENST00000547063 DOCK9Q9BZ29 2069 aa15.64■□□□□ 0.09
TRAFD1-203ENST00000547063 EML5Q05BV3 1969 aa15.64■□□□□ 0.09
TRAFD1-203ENST00000547063 HMX2A2RU54 273 aa15.64■□□□□ 0.09
TRAFD1-203ENST00000547063 KLHL33A6NCF5 533 aa15.64■□□□□ 0.09
TRAFD1-203ENST00000547063 MAGEC1O60732 1142 aa15.64■□□□□ 0.09
TRAFD1-203ENST00000547063 RHOBTB1O94844 696 aa15.64■□□□□ 0.09
TRAFD1-203ENST00000547063 ASMTLO95671 621 aa15.64■□□□□ 0.09
TRAFD1-203ENST00000547063 FTH1P02794 183 aa15.64■□□□□ 0.09
TRAFD1-203ENST00000547063 MPOP05164 745 aa15.64■□□□□ 0.09
TRAFD1-203ENST00000547063 CHRM3P20309 590 aa15.64■□□□□ 0.09
TRAFD1-203ENST00000547063 ABCG1P45844 678 aa15.64■□□□□ 0.09
TRAFD1-203ENST00000547063 RABIFP47224 123 aa15.64■□□□□ 0.09
TRAFD1-203ENST00000547063 THOP1P52888 689 aa15.64■□□□□ 0.09
TRAFD1-203ENST00000547063 RAB10P61026 200 aa15.64■□□□□ 0.09
TRAFD1-203ENST00000547063 DMWDQ09019 674 aa15.64■□□□□ 0.09
TRAFD1-203ENST00000547063 OVGP1Q12889 678 aa15.64■□□□□ 0.09
TRAFD1-203ENST00000547063 PTK2BQ14289 1009 aa15.64■□□□□ 0.09
TRAFD1-203ENST00000547063 TAF1BQ53T94 588 aaPredicted RBP15.64■□□□□ 0.09
TRAFD1-203ENST00000547063 TNFAIP8L3Q5GJ75 292 aa15.64■□□□□ 0.09
TRAFD1-203ENST00000547063 MICALCLQ6ZW33 695 aa15.64■□□□□ 0.09
TRAFD1-203ENST00000547063 ABI3BPQ7Z7G0 1075 aa15.64■□□□□ 0.09
TRAFD1-203ENST00000547063 DCP2Q8IU60 420 aaKnown RBP15.64■□□□□ 0.09
TRAFD1-203ENST00000547063 MAML2Q8IZL2 1156 aaPredicted RBP15.64■□□□□ 0.09
TRAFD1-203ENST00000547063 CYP4X1Q8N118 509 aa15.64■□□□□ 0.09
TRAFD1-203ENST00000547063 MYOCQ99972 504 aa15.64■□□□□ 0.09
TRAFD1-203ENST00000547063 BOCQ9BWV1 1114 aa15.64■□□□□ 0.09
TRAFD1-203ENST00000547063 FZD3Q9NPG1 666 aa15.64■□□□□ 0.09
TRAFD1-203ENST00000547063 ZSCAN32Q9NX65 697 aa15.64■□□□□ 0.09
TRAFD1-203ENST00000547063 KLHL42Q9P2K6 505 aa15.64■□□□□ 0.09
TRAFD1-203ENST00000547063 OR1A2Q9Y585 309 aa15.64■□□□□ 0.09
TRAFD1-203ENST00000547063 PRR33A8MZF0 331 aa15.63■□□□□ 0.09
TRAFD1-203ENST00000547063 ALDOAP04075 364 aaKnown RBP15.63■□□□□ 0.09
TRAFD1-203ENST00000547063 F7P08709 466 aaPredicted RBP15.63■□□□□ 0.09
TRAFD1-203ENST00000547063 SAT1P21673 171 aa15.63■□□□□ 0.09
TRAFD1-203ENST00000547063 FDXRP22570 491 aa15.63■□□□□ 0.09
TRAFD1-203ENST00000547063 CA5AP35218 305 aa15.63■□□□□ 0.09
TRAFD1-203ENST00000547063 PFN3P60673 137 aa15.63■□□□□ 0.09
TRAFD1-203ENST00000547063 B4GALNT1Q00973 533 aa15.63■□□□□ 0.09
TRAFD1-203ENST00000547063 PDAP1Q13442 181 aaKnown RBP15.63■□□□□ 0.09
TRAFD1-203ENST00000547063 NFATC4Q14934 902 aa15.63■□□□□ 0.09
TRAFD1-203ENST00000547063 ZKSCAN8Q15776 578 aaPredicted RBP15.63■□□□□ 0.09
TRAFD1-203ENST00000547063 BCL7AQ4VC05 210 aa15.63■□□□□ 0.09
TRAFD1-203ENST00000547063 CTSL3PQ5NE16 218 aa15.63■□□□□ 0.09
TRAFD1-203ENST00000547063 RBM20Q5T481 1227 aaKnown RBP15.63■□□□□ 0.09
TRAFD1-203ENST00000547063 ZNF549Q6P9A3 640 aa15.63■□□□□ 0.09
TRAFD1-203ENST00000547063 GCNT7Q6ZNI0 430 aa15.63■□□□□ 0.09
TRAFD1-203ENST00000547063 RAPH1Q70E73 1250 aa15.63■□□□□ 0.09
TRAFD1-203ENST00000547063 ADGRG6Q86SQ4 1221 aa15.63■□□□□ 0.09
TRAFD1-203ENST00000547063 LCA5Q86VQ0 697 aa15.63■□□□□ 0.09
TRAFD1-203ENST00000547063 IQCHQ86VS3 1027 aa15.63■□□□□ 0.09
TRAFD1-203ENST00000547063 SRRM1Q8IYB3 904 aaKnown RBP15.63■□□□□ 0.09
TRAFD1-203ENST00000547063 CLDN19Q8N6F1 224 aa15.63■□□□□ 0.09
TRAFD1-203ENST00000547063 PNPLA1Q8N8W4 532 aa15.63■□□□□ 0.09
TRAFD1-203ENST00000547063 MZB1Q8WU39 189 aa15.63■□□□□ 0.09
TRAFD1-203ENST00000547063 NELL1Q92832 810 aa15.63■□□□□ 0.09
TRAFD1-203ENST00000547063 FUBP1Q96AE4 644 aaKnown RBP15.63■□□□□ 0.09
TRAFD1-203ENST00000547063 SKA1Q96BD8 255 aa15.63■□□□□ 0.09
TRAFD1-203ENST00000547063 TLCD1Q96CP7 247 aa15.63■□□□□ 0.09
TRAFD1-203ENST00000547063 HSPA12BQ96MM6 686 aa15.63■□□□□ 0.09
TRAFD1-203ENST00000547063 SMC6Q96SB8 1091 aa15.63■□□□□ 0.09
TRAFD1-203ENST00000547063 NDNQ99608 321 aa15.63■□□□□ 0.09
TRAFD1-203ENST00000547063 OR2AG1Q9H205 316 aa15.63■□□□□ 0.09
TRAFD1-203ENST00000547063 SYTL2Q9HCH5 934 aa15.63■□□□□ 0.09
TRAFD1-203ENST00000547063 AASDHPPTQ9NRN7 309 aa15.63■□□□□ 0.09
TRAFD1-203ENST00000547063 SNX15Q9NRS6 342 aa15.63■□□□□ 0.09
TRAFD1-203ENST00000547063 SPATS2LQ9NUQ6 558 aaKnown RBP15.63■□□□□ 0.09
TRAFD1-203ENST00000547063 TRMT6Q9UJA5 497 aaKnown RBP15.63■□□□□ 0.09
TRAFD1-203ENST00000547063 NOVA2Q9UNW9 492 aaKnown RBP15.63■□□□□ 0.09
TRAFD1-203ENST00000547063 ANKRD6Q9Y2G4 727 aa15.63■□□□□ 0.09
TRAFD1-203ENST00000547063 DNMT3AQ9Y6K1 912 aaPredicted RBP15.63■□□□□ 0.09
TRAFD1-203ENST00000547063 CEP192Q8TEP8 1941 aa15.62■□□□□ 0.09
TRAFD1-203ENST00000547063 A0A087X1B8 175 aa15.62■□□□□ 0.09
TRAFD1-203ENST00000547063 POM121BA6NF01 834 aa15.62■□□□□ 0.09
TRAFD1-203ENST00000547063 TPP1O14773 563 aa15.62■□□□□ 0.09
TRAFD1-203ENST00000547063 TNFRSF10CO14798 259 aa15.62■□□□□ 0.09
TRAFD1-203ENST00000547063 GPR37L1O60883 481 aa15.62■□□□□ 0.09
TRAFD1-203ENST00000547063 MTX2O75431 263 aa15.62■□□□□ 0.09
TRAFD1-203ENST00000547063 SYF2O95926 243 aaKnown RBP15.62■□□□□ 0.09
TRAFD1-203ENST00000547063 COL6A2P12110 1019 aa15.62■□□□□ 0.09
TRAFD1-203ENST00000547063 BCKDHBP21953 392 aa15.62■□□□□ 0.09
TRAFD1-203ENST00000547063 SLC26A3P40879 764 aa15.62■□□□□ 0.09
TRAFD1-203ENST00000547063 MAGEA12P43365 314 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms