RNA–Protein interactions for RNA: ENST00000546411.6

CUX1-211, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-211ENST00000546411 TMEM74Q96NL1 305 aa15.53■□□□□ 0.08
CUX1-211ENST00000546411 OLFM1Q99784 485 aa15.53■□□□□ 0.08
CUX1-211ENST00000546411 MYOCQ99972 504 aa15.53■□□□□ 0.08
CUX1-211ENST00000546411 MBLAC1A4D2B0 266 aaPredicted RBP15.53■□□□□ 0.08
CUX1-211ENST00000546411 MTMR11A4FU01 709 aa15.53■□□□□ 0.08
CUX1-211ENST00000546411 GABRDO14764 452 aa15.53■□□□□ 0.08
CUX1-211ENST00000546411 TP73O15350 636 aa15.53■□□□□ 0.08
CUX1-211ENST00000546411 GSTM1P09488 218 aa15.53■□□□□ 0.08
CUX1-211ENST00000546411 CDH15P55291 814 aa15.53■□□□□ 0.08
CUX1-211ENST00000546411 TNFAIP8L3Q5GJ75 292 aa15.53■□□□□ 0.08
CUX1-211ENST00000546411 RABL3Q5HYI8 236 aa15.53■□□□□ 0.08
CUX1-211ENST00000546411 NUDT18Q6ZVK8 323 aa15.53■□□□□ 0.08
CUX1-211ENST00000546411 PAQR9Q6ZVX9 377 aa15.53■□□□□ 0.08
CUX1-211ENST00000546411 DNAJB7Q7Z6W7 309 aaPredicted RBP15.53■□□□□ 0.08
CUX1-211ENST00000546411 ZNF366Q8N895 744 aa15.53■□□□□ 0.08
CUX1-211ENST00000546411 BRD9Q9H8M2 597 aa15.53■□□□□ 0.08
CUX1-211ENST00000546411 CLK4Q9HAZ1 481 aaKnown RBP15.53■□□□□ 0.08
CUX1-211ENST00000546411 RGS17Q9UGC6 210 aaPredicted RBP15.53■□□□□ 0.08
CUX1-211ENST00000546411 ARIH1Q9Y4X5 557 aaPredicted RBP15.53■□□□□ 0.08
CUX1-211ENST00000546411 MAP1BP46821 2468 aaKnown RBP15.53■□□□□ 0.08
CUX1-211ENST00000546411 TMEM88BA6NKF7 163 aa15.53■□□□□ 0.08
CUX1-211ENST00000546411 KDM1AO60341 852 aa15.53■□□□□ 0.08
CUX1-211ENST00000546411 OR1I1O60431 355 aa15.53■□□□□ 0.08
CUX1-211ENST00000546411 FAM20BO75063 409 aa15.53■□□□□ 0.08
CUX1-211ENST00000546411 ANXA6P08133 673 aa15.53■□□□□ 0.08
CUX1-211ENST00000546411 CSKP41240 450 aa15.53■□□□□ 0.08
CUX1-211ENST00000546411 PLPP4Q5VZY2 271 aa15.53■□□□□ 0.08
CUX1-211ENST00000546411 ABRAXAS1Q6UWZ7 409 aa15.53■□□□□ 0.08
CUX1-211ENST00000546411 DGCR14Q96DF8 476 aaKnown RBP15.53■□□□□ 0.08
CUX1-211ENST00000546411 DHRS4Q9BTZ2 278 aa15.53■□□□□ 0.08
CUX1-211ENST00000546411 LRTM1Q9HBL6 345 aa15.53■□□□□ 0.08
CUX1-211ENST00000546411 AGRPO00253 132 aa15.52■□□□□ 0.08
CUX1-211ENST00000546411 GLDCP23378 1020 aa15.52■□□□□ 0.08
CUX1-211ENST00000546411 PRKAG1P54619 331 aa15.52■□□□□ 0.08
CUX1-211ENST00000546411 GTF2H2Q13888 395 aa15.52■□□□□ 0.08
CUX1-211ENST00000546411 SIM2Q14190 667 aaPredicted RBP15.52■□□□□ 0.08
CUX1-211ENST00000546411 ADGRF1Q5T601 910 aa15.52■□□□□ 0.08
CUX1-211ENST00000546411 GTF2H2CQ6P1K8 395 aa15.52■□□□□ 0.08
CUX1-211ENST00000546411 CRTC3Q6UUV7 619 aa15.52■□□□□ 0.08
CUX1-211ENST00000546411 SPNS2Q8IVW8 549 aa15.52■□□□□ 0.08
CUX1-211ENST00000546411 ADHFE1Q8IWW8 467 aa15.52■□□□□ 0.08
CUX1-211ENST00000546411 OR10Q1Q8NGQ4 319 aa15.52■□□□□ 0.08
CUX1-211ENST00000546411 B4GALNT2Q8NHY0 566 aa15.52■□□□□ 0.08
CUX1-211ENST00000546411 STK25O00506 426 aa15.52■□□□□ 0.08
CUX1-211ENST00000546411 LIN7AO14910 233 aaPredicted RBP15.52■□□□□ 0.08
CUX1-211ENST00000546411 UROSP10746 265 aa15.52■□□□□ 0.08
CUX1-211ENST00000546411 S100A5P33763 92 aa15.52■□□□□ 0.08
CUX1-211ENST00000546411 GSCP56915 257 aaPredicted RBP15.52■□□□□ 0.08
CUX1-211ENST00000546411 STEAP4Q687X5 459 aa15.52■□□□□ 0.08
CUX1-211ENST00000546411 ZNF549Q6P9A3 640 aa15.52■□□□□ 0.08
CUX1-211ENST00000546411 KBTBD2Q8IY47 623 aa15.52■□□□□ 0.08
CUX1-211ENST00000546411 RORBQ92753 470 aa15.52■□□□□ 0.08
CUX1-211ENST00000546411 Q9Y3F1 56 aa15.52■□□□□ 0.08
CUX1-211ENST00000546411 NUMA1Q14980 2115 aa15.52■□□□□ 0.07
CUX1-211ENST00000546411 A0A1W2PRU2 124 aa15.52■□□□□ 0.07
CUX1-211ENST00000546411 CSTF3Q12996 717 aaKnown RBP15.52■□□□□ 0.07
CUX1-211ENST00000546411 TRIM60Q495X7 471 aa15.52■□□□□ 0.07
CUX1-211ENST00000546411 PKDCCQ504Y2 493 aa15.52■□□□□ 0.07
CUX1-211ENST00000546411 FGD3Q5JSP0 725 aa15.52■□□□□ 0.07
CUX1-211ENST00000546411 C2CD4AQ8NCU7 369 aaPredicted RBP15.52■□□□□ 0.07
CUX1-211ENST00000546411 TBC1D30Q9Y2I9 924 aa15.52■□□□□ 0.07
CUX1-211ENST00000546411 ANKRD66B4E2M5 251 aa15.51■□□□□ 0.07
CUX1-211ENST00000546411 RECQL5O94762 991 aaPredicted RBP15.51■□□□□ 0.07
CUX1-211ENST00000546411 ADSLP30566 484 aaPredicted RBP15.51■□□□□ 0.07
CUX1-211ENST00000546411 TRPC1P48995 793 aa15.51■□□□□ 0.07
CUX1-211ENST00000546411 CACNG1Q06432 222 aa15.51■□□□□ 0.07
CUX1-211ENST00000546411 KIAA0319Q5VV43 1072 aa15.51■□□□□ 0.07
CUX1-211ENST00000546411 RAET1GQ6H3X3 334 aa15.51■□□□□ 0.07
CUX1-211ENST00000546411 ING5Q8WYH8 240 aa15.51■□□□□ 0.07
CUX1-211ENST00000546411 EBPLQ9BY08 206 aa15.51■□□□□ 0.07
CUX1-211ENST00000546411 MRPS23Q9Y3D9 190 aaKnown RBP15.51■□□□□ 0.07
CUX1-211ENST00000546411 LTBP4Q8N2S1 1624 aa15.51■□□□□ 0.07
CUX1-211ENST00000546411 SHANK3Q9BYB0 1731 aa15.51■□□□□ 0.07
CUX1-211ENST00000546411 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.51■□□□□ 0.07
CUX1-211ENST00000546411 MAN1A2O60476 641 aa15.51■□□□□ 0.07
CUX1-211ENST00000546411 SNNO75324 88 aaPredicted RBP15.51■□□□□ 0.07
CUX1-211ENST00000546411 CLIC3O95833 236 aa15.51■□□□□ 0.07
CUX1-211ENST00000546411 ACRP10323 421 aa15.51■□□□□ 0.07
CUX1-211ENST00000546411 CASP9P55211 416 aa15.51■□□□□ 0.07
CUX1-211ENST00000546411 ALDH6A1Q02252 535 aaKnown RBP15.51■□□□□ 0.07
CUX1-211ENST00000546411 SULT2A1Q06520 285 aa15.51■□□□□ 0.07
CUX1-211ENST00000546411 NAE1Q13564 534 aa15.51■□□□□ 0.07
CUX1-211ENST00000546411 TAF1AQ15573 450 aaPredicted RBP15.51■□□□□ 0.07
CUX1-211ENST00000546411 ZNF614Q8N883 585 aa15.51■□□□□ 0.07
CUX1-211ENST00000546411 ENDOVQ8N8Q3 282 aaKnown RBP15.51■□□□□ 0.07
CUX1-211ENST00000546411 MRPS26Q9BYN8 205 aaKnown RBP15.51■□□□□ 0.07
CUX1-211ENST00000546411 C1orf21Q9H246 121 aa15.51■□□□□ 0.07
CUX1-211ENST00000546411 REEP1Q9H902 201 aa15.51■□□□□ 0.07
CUX1-211ENST00000546411 ABCB8Q9NUT2 735 aa15.51■□□□□ 0.07
CUX1-211ENST00000546411 KIAA1522Q9P206 1035 aaPredicted RBP15.51■□□□□ 0.07
CUX1-211ENST00000546411 ADAMTS6Q9UKP5 1117 aa15.51■□□□□ 0.07
CUX1-211ENST00000546411 BBIP1A8MTZ0 92 aa15.51■□□□□ 0.07
CUX1-211ENST00000546411 SDHDO14521 159 aa15.51■□□□□ 0.07
CUX1-211ENST00000546411 AXIN1O15169 862 aa15.51■□□□□ 0.07
CUX1-211ENST00000546411 ZNF37AP17032 561 aaPredicted RBP15.51■□□□□ 0.07
CUX1-211ENST00000546411 XIAPP98170 497 aa15.51■□□□□ 0.07
CUX1-211ENST00000546411 ZNF534Q76KX8 674 aa15.51■□□□□ 0.07
CUX1-211ENST00000546411 ZBTB2Q8N680 514 aa15.51■□□□□ 0.07
CUX1-211ENST00000546411 TSGA13Q96PP4 275 aa15.51■□□□□ 0.07
CUX1-211ENST00000546411 IGFLR1Q9H665 355 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms