RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 TRIM39Q9HCM9 518 aa12.36□□□□□ -0.43
COPS7A-221ENST00000546229 SLC40A1Q9NP59 571 aa12.36□□□□□ -0.43
COPS7A-221ENST00000546229 WASH6PQ9NQA3 447 aa12.36□□□□□ -0.43
COPS7A-221ENST00000546229 EPHA6Q9UF33 1036 aa12.36□□□□□ -0.43
COPS7A-221ENST00000546229 CROTQ9UKG9 612 aa12.36□□□□□ -0.43
COPS7A-221ENST00000546229 PLAAQ9Y263 795 aa12.36□□□□□ -0.43
COPS7A-221ENST00000546229 TP53TG5Q9Y2B4 290 aa12.36□□□□□ -0.43
COPS7A-221ENST00000546229 ZNF711Q9Y462 761 aa12.36□□□□□ -0.43
COPS7A-221ENST00000546229 PCDHGA6Q9Y5G7 932 aa12.36□□□□□ -0.43
COPS7A-221ENST00000546229 PRRC2CQ9Y520 2896 aaKnown RBP12.36□□□□□ -0.43
COPS7A-221ENST00000546229 OR52A4PA6NMU1 304 aa12.35□□□□□ -0.43
COPS7A-221ENST00000546229 GAPDHSO14556 408 aaPredicted RBP12.35□□□□□ -0.43
COPS7A-221ENST00000546229 MTX2O75431 263 aa12.35□□□□□ -0.43
COPS7A-221ENST00000546229 UBXN7O94888 489 aa12.35□□□□□ -0.43
COPS7A-221ENST00000546229 ZNF7P17097 686 aaPredicted RBP12.35□□□□□ -0.43
COPS7A-221ENST00000546229 TYRP1P17643 537 aa12.35□□□□□ -0.43
COPS7A-221ENST00000546229 KDELR1P24390 212 aa12.35□□□□□ -0.43
COPS7A-221ENST00000546229 FANCCQ00597 558 aa12.35□□□□□ -0.43
COPS7A-221ENST00000546229 GPR18Q14330 331 aa12.35□□□□□ -0.43
COPS7A-221ENST00000546229 HADHQ16836 314 aaKnown RBP12.35□□□□□ -0.43
COPS7A-221ENST00000546229 LACTB2Q53H82 288 aaPredicted RBP12.35□□□□□ -0.43
COPS7A-221ENST00000546229 TMEM135Q86UB9 458 aa12.35□□□□□ -0.43
COPS7A-221ENST00000546229 VSIG1Q86XK7 387 aa12.35□□□□□ -0.43
COPS7A-221ENST00000546229 GALNT6Q8NCL4 622 aa12.35□□□□□ -0.43
COPS7A-221ENST00000546229 GPR150Q8NGU9 434 aa12.35□□□□□ -0.43
COPS7A-221ENST00000546229 PSMG3-AS1Q96PY0 264 aa12.35□□□□□ -0.43
COPS7A-221ENST00000546229 VPS35Q96QK1 796 aa12.35□□□□□ -0.43
COPS7A-221ENST00000546229 ULBP3Q9BZM4 244 aa12.35□□□□□ -0.43
COPS7A-221ENST00000546229 RAB33BQ9H082 229 aa12.35□□□□□ -0.43
COPS7A-221ENST00000546229 POT1Q9NUX5 634 aa12.35□□□□□ -0.43
COPS7A-221ENST00000546229 UVRAGQ9P2Y5 699 aa12.35□□□□□ -0.43
COPS7A-221ENST00000546229 SHOC2Q9UQ13 582 aa12.35□□□□□ -0.43
COPS7A-221ENST00000546229 MAN2B2Q9Y2E5 1009 aa12.35□□□□□ -0.43
COPS7A-221ENST00000546229 WDR37Q9Y2I8 494 aa12.35□□□□□ -0.43
COPS7A-221ENST00000546229 KCTD3Q9Y597 815 aa12.35□□□□□ -0.43
COPS7A-221ENST00000546229 SPTBN1Q01082 2364 aaKnown RBP12.35□□□□□ -0.43
COPS7A-221ENST00000546229 SHANK1Q9Y566 2161 aa12.35□□□□□ -0.43
COPS7A-221ENST00000546229 GPR39O43194 453 aa12.34□□□□□ -0.43
COPS7A-221ENST00000546229 KRT7P08729 469 aa12.34□□□□□ -0.43
COPS7A-221ENST00000546229 TCN2P20062 427 aa12.34□□□□□ -0.43
COPS7A-221ENST00000546229 CD68P34810 354 aaPredicted RBP12.34□□□□□ -0.43
COPS7A-221ENST00000546229 DLSTP36957 453 aa12.34□□□□□ -0.43
COPS7A-221ENST00000546229 NOP2P46087 812 aaKnown RBP12.34□□□□□ -0.43
COPS7A-221ENST00000546229 MC1RQ01726 317 aa12.34□□□□□ -0.43
COPS7A-221ENST00000546229 DMPKQ09013 629 aa12.34□□□□□ -0.43
COPS7A-221ENST00000546229 NOMO1Q15155 1222 aa12.34□□□□□ -0.43
COPS7A-221ENST00000546229 NPNTQ6UXI9 565 aa12.34□□□□□ -0.43
COPS7A-221ENST00000546229 LRRTM4Q86VH4 590 aa12.34□□□□□ -0.43
COPS7A-221ENST00000546229 TTC30BQ8N4P2 665 aa12.34□□□□□ -0.43
COPS7A-221ENST00000546229 KCTD6Q8NC69 237 aa12.34□□□□□ -0.43
COPS7A-221ENST00000546229 SPATA22Q8NHS9 363 aa12.34□□□□□ -0.43
COPS7A-221ENST00000546229 CCHCR1Q8TD31 782 aa12.34□□□□□ -0.43
COPS7A-221ENST00000546229 SLC41A2Q96JW4 573 aa12.34□□□□□ -0.43
COPS7A-221ENST00000546229 TGM7Q96PF1 710 aa12.34□□□□□ -0.43
COPS7A-221ENST00000546229 OR6C1Q96RD1 312 aa12.34□□□□□ -0.43
COPS7A-221ENST00000546229 RUFY1Q96T51 708 aa12.34□□□□□ -0.43
COPS7A-221ENST00000546229 SPATA16Q9BXB7 569 aa12.34□□□□□ -0.43
COPS7A-221ENST00000546229 ADGRE3Q9BY15 652 aa12.34□□□□□ -0.43
COPS7A-221ENST00000546229 SLC25A51Q9H1U9 297 aa12.34□□□□□ -0.43
COPS7A-221ENST00000546229 OSGEPL1Q9H4B0 414 aa12.34□□□□□ -0.43
COPS7A-221ENST00000546229 CBX8Q9HC52 389 aa12.34□□□□□ -0.43
COPS7A-221ENST00000546229 TNRC6AQ8NDV7 1962 aaKnown RBP12.34□□□□□ -0.43
COPS7A-221ENST00000546229 KMOO15229 486 aa12.33□□□□□ -0.44
COPS7A-221ENST00000546229 VEGFDO43915 354 aa12.33□□□□□ -0.44
COPS7A-221ENST00000546229 KIAA0754O94854 1291 aa12.33□□□□□ -0.44
COPS7A-221ENST00000546229 SLC25A14O95258 325 aaPredicted RBP12.33□□□□□ -0.44
COPS7A-221ENST00000546229 RECKO95980 971 aa12.33□□□□□ -0.44
COPS7A-221ENST00000546229 MT-CYBP00156 380 aaPredicted RBP12.33□□□□□ -0.44
COPS7A-221ENST00000546229 NELFEP18615 380 aaKnown RBP12.33□□□□□ -0.44
COPS7A-221ENST00000546229 SEPHS1P49903 392 aa12.33□□□□□ -0.44
COPS7A-221ENST00000546229 PMS2P54278 862 aa12.33□□□□□ -0.44
COPS7A-221ENST00000546229 IL11RAQ14626 422 aa12.33□□□□□ -0.44
COPS7A-221ENST00000546229 PRKD1Q15139 912 aaPredicted RBP12.33□□□□□ -0.44
COPS7A-221ENST00000546229 SEPT7Q16181 437 aaKnown RBP12.33□□□□□ -0.44
COPS7A-221ENST00000546229 TAZQ16635 292 aa12.33□□□□□ -0.44
COPS7A-221ENST00000546229 INSCQ1MX18 579 aa12.33□□□□□ -0.44
COPS7A-221ENST00000546229 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.33□□□□□ -0.44
COPS7A-221ENST00000546229 ATP13A5Q4VNC0 1218 aa12.33□□□□□ -0.44
COPS7A-221ENST00000546229 TCTN3Q6NUS6 607 aa12.33□□□□□ -0.44
COPS7A-221ENST00000546229 C16orf46Q6P387 395 aa12.33□□□□□ -0.44
COPS7A-221ENST00000546229 KDELC1Q6UW63 502 aa12.33□□□□□ -0.44
COPS7A-221ENST00000546229 C6orf15Q6UXA7 325 aaPredicted RBP12.33□□□□□ -0.44
COPS7A-221ENST00000546229 FAM83HQ6ZRV2 1179 aaPredicted RBP12.33□□□□□ -0.44
COPS7A-221ENST00000546229 LUZP1Q86V48 1076 aa12.33□□□□□ -0.44
COPS7A-221ENST00000546229 AKIRIN1Q9H9L7 192 aaPredicted RBP12.33□□□□□ -0.44
COPS7A-221ENST00000546229 MED13Q9UHV7 2174 aa12.32□□□□□ -0.44
COPS7A-221ENST00000546229 IGHV5-51A0A0C4DH38 117 aa12.32□□□□□ -0.44
COPS7A-221ENST00000546229 MTSS1O43312 755 aa12.32□□□□□ -0.44
COPS7A-221ENST00000546229 SPAG6O75602 509 aa12.32□□□□□ -0.44
COPS7A-221ENST00000546229 MTA2O94776 668 aa12.32□□□□□ -0.44
COPS7A-221ENST00000546229 NDUFA10O95299 355 aa12.32□□□□□ -0.44
COPS7A-221ENST00000546229 SERPINC1P01008 464 aa12.32□□□□□ -0.44
COPS7A-221ENST00000546229 VIPP01282 170 aa12.32□□□□□ -0.44
COPS7A-221ENST00000546229 GP1BBP13224 206 aa12.32□□□□□ -0.44
COPS7A-221ENST00000546229 RPL10P27635 214 aaKnown RBP12.32□□□□□ -0.44
COPS7A-221ENST00000546229 SSR1P43307 286 aaKnown RBP12.32□□□□□ -0.44
COPS7A-221ENST00000546229 CTSCP53634 463 aa12.32□□□□□ -0.44
COPS7A-221ENST00000546229 DRG2P55039 364 aaKnown RBP12.32□□□□□ -0.44
COPS7A-221ENST00000546229 CDK18Q07002 472 aa12.32□□□□□ -0.44
COPS7A-221ENST00000546229 FOXM1Q08050 763 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms