RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 OSGEPL1Q9H4B0 414 aa15.09■□□□□ 0.01
CLSTN3-216ENST00000545663 KCND1Q9NSA2 647 aa15.09■□□□□ 0.01
CLSTN3-216ENST00000545663 KLC4Q9NSK0 619 aa15.09■□□□□ 0.01
CLSTN3-216ENST00000545663 SEMA5BQ9P283 1151 aa15.09■□□□□ 0.01
CLSTN3-216ENST00000545663 SUCOQ9UBS9 1254 aaKnown RBP15.09■□□□□ 0.01
CLSTN3-216ENST00000545663 EPHA6Q9UF33 1036 aa15.09■□□□□ 0.01
CLSTN3-216ENST00000545663 NSD1Q96L73 2696 aaPredicted RBP15.08■□□□□ 0
CLSTN3-216ENST00000545663 GRID2O43424 1007 aa15.08■□□□□ 0
CLSTN3-216ENST00000545663 HTRA2O43464 458 aaPredicted RBP15.08■□□□□ 0
CLSTN3-216ENST00000545663 LCA5LO95447 670 aa15.08■□□□□ 0
CLSTN3-216ENST00000545663 RORAP35398 523 aa15.08■□□□□ 0
CLSTN3-216ENST00000545663 PPP1R2P41236 205 aa15.08■□□□□ 0
CLSTN3-216ENST00000545663 OTUD4Q01804 1114 aaKnown RBP15.08■□□□□ 0
CLSTN3-216ENST00000545663 NSUN2Q08J23 767 aaKnown RBP eCLIP15.08■□□□□ 0
CLSTN3-216ENST00000545663 PTCHD3Q3KNS1 767 aa15.08■□□□□ 0
CLSTN3-216ENST00000545663 ZNF658Q5TYW1 1059 aaPredicted RBP15.08■□□□□ 0
CLSTN3-216ENST00000545663 TMEM151BQ8IW70 566 aa15.08■□□□□ 0
CLSTN3-216ENST00000545663 TRIM59Q8IWR1 403 aa15.08■□□□□ 0
CLSTN3-216ENST00000545663 TMEM35BQ8NCS4 154 aa15.08■□□□□ 0
CLSTN3-216ENST00000545663 EXD1Q8NHP7 514 aa15.08■□□□□ 0
CLSTN3-216ENST00000545663 UBXN4Q92575 508 aa15.08■□□□□ 0
CLSTN3-216ENST00000545663 SMARCE1Q969G3 411 aa15.08■□□□□ 0
CLSTN3-216ENST00000545663 ZNF501Q96CX3 271 aaPredicted RBP15.08■□□□□ 0
CLSTN3-216ENST00000545663 CEP63Q96MT8 703 aa15.08■□□□□ 0
CLSTN3-216ENST00000545663 OLAHQ9NV23 265 aa15.08■□□□□ 0
CLSTN3-216ENST00000545663 SLC23A2Q9UGH3 650 aa15.08■□□□□ 0
CLSTN3-216ENST00000545663 SH3BGRL2Q9UJC5 107 aa15.08■□□□□ 0
CLSTN3-216ENST00000545663 OR52A4PA6NMU1 304 aa15.07■□□□□ 0
CLSTN3-216ENST00000545663 PSMD11O00231 422 aa15.07■□□□□ 0
CLSTN3-216ENST00000545663 FOXN3O00409 490 aaPredicted RBP15.07■□□□□ 0
CLSTN3-216ENST00000545663 IPO13O94829 963 aaKnown RBP15.07■□□□□ 0
CLSTN3-216ENST00000545663 JCHAINP01591 159 aa15.07■□□□□ 0
CLSTN3-216ENST00000545663 CYP2A6P11509 494 aaPredicted RBP15.07■□□□□ 0
CLSTN3-216ENST00000545663 KLK2P20151 261 aa15.07■□□□□ 0
CLSTN3-216ENST00000545663 GSDMDP57764 484 aa15.07■□□□□ 0
CLSTN3-216ENST00000545663 FOXL2P58012 376 aa15.07■□□□□ 0
CLSTN3-216ENST00000545663 TUBB4BP68371 445 aa15.07■□□□□ 0
CLSTN3-216ENST00000545663 PTSQ03393 145 aa15.07■□□□□ 0
CLSTN3-216ENST00000545663 TUBB2AQ13885 445 aa15.07■□□□□ 0
CLSTN3-216ENST00000545663 ZNF648Q5T619 568 aaPredicted RBP15.07■□□□□ 0
CLSTN3-216ENST00000545663 PLEKHA7Q6IQ23 1121 aa15.07■□□□□ 0
CLSTN3-216ENST00000545663 TRIM65Q6PJ69 517 aa15.07■□□□□ 0
CLSTN3-216ENST00000545663 RAB43Q86YS6 212 aa15.07■□□□□ 0
CLSTN3-216ENST00000545663 TGIF2LYQ8IUE0 185 aa15.07■□□□□ 0
CLSTN3-216ENST00000545663 PHYKPLQ8IUZ5 450 aa15.07■□□□□ 0
CLSTN3-216ENST00000545663 AVL9Q8NBF6 648 aa15.07■□□□□ 0
CLSTN3-216ENST00000545663 JOSD2Q8TAC2 188 aa15.07■□□□□ 0
CLSTN3-216ENST00000545663 SPOCK2Q92563 424 aa15.07■□□□□ 0
CLSTN3-216ENST00000545663 CLIP3Q96DZ5 547 aa15.07■□□□□ 0
CLSTN3-216ENST00000545663 SCRN2Q96FV2 425 aa15.07■□□□□ 0
CLSTN3-216ENST00000545663 CNDP1Q96KN2 507 aa15.07■□□□□ 0
CLSTN3-216ENST00000545663 LRFN5Q96NI6 719 aa15.07■□□□□ 0
CLSTN3-216ENST00000545663 TUBB2BQ9BVA1 445 aa15.07■□□□□ 0
CLSTN3-216ENST00000545663 NUP62CLQ9H1M0 184 aa15.07■□□□□ 0
CLSTN3-216ENST00000545663 SLC40A1Q9NP59 571 aa15.07■□□□□ 0
CLSTN3-216ENST00000545663 ARFGAP3Q9NP61 516 aa15.07■□□□□ 0
CLSTN3-216ENST00000545663 VPS18Q9P253 973 aa15.07■□□□□ 0
CLSTN3-216ENST00000545663 CNTRLQ7Z7A1 2325 aa15.07■□□□□ 0
CLSTN3-216ENST00000545663 PCDH17O14917 1159 aa15.06■□□□□ 0
CLSTN3-216ENST00000545663 LDB2O43679 373 aa15.06■□□□□ 0
CLSTN3-216ENST00000545663 ATXN8OSP0DMR3 200 aa15.06■□□□□ 0
CLSTN3-216ENST00000545663 SPTBP11277 2137 aa15.06■□□□□ 0
CLSTN3-216ENST00000545663 BRAFP15056 766 aa15.06■□□□□ 0
CLSTN3-216ENST00000545663 CDH5P33151 784 aaPredicted RBP15.06■□□□□ 0
CLSTN3-216ENST00000545663 PBX1P40424 430 aa15.06■□□□□ 0
CLSTN3-216ENST00000545663 ARL4DP49703 201 aa15.06■□□□□ 0
CLSTN3-216ENST00000545663 TDGF1P3P51864 188 aa15.06■□□□□ 0
CLSTN3-216ENST00000545663 AP1S1P61966 158 aa15.06■□□□□ 0
CLSTN3-216ENST00000545663 ADORA2A-AS1P86434 159 aa15.06■□□□□ 0
CLSTN3-216ENST00000545663 TRAF2Q12933 501 aa15.06■□□□□ 0
CLSTN3-216ENST00000545663 ABRQ12979 859 aa15.06■□□□□ 0
CLSTN3-216ENST00000545663 ZNF169Q14929 603 aaPredicted RBP15.06■□□□□ 0
CLSTN3-216ENST00000545663 NCF4Q15080 339 aa15.06■□□□□ 0
CLSTN3-216ENST00000545663 COBLL1Q53SF7 1204 aa15.06■□□□□ 0
CLSTN3-216ENST00000545663 LRRC66Q68CR7 880 aa15.06■□□□□ 0
CLSTN3-216ENST00000545663 ZNF324BQ6AW86 544 aaPredicted RBP15.06■□□□□ 0
CLSTN3-216ENST00000545663 FAM180AQ6UWF9 173 aa15.06■□□□□ 0
CLSTN3-216ENST00000545663 RPTNQ6XPR3 784 aa15.06■□□□□ 0
CLSTN3-216ENST00000545663 Q71RC1 249 aaPredicted RBP15.06■□□□□ 0
CLSTN3-216ENST00000545663 SYTL1Q8IYJ3 562 aa15.06■□□□□ 0
CLSTN3-216ENST00000545663 D2HGDHQ8N465 521 aa15.06■□□□□ 0
CLSTN3-216ENST00000545663 AOPEPQ8N6M6 819 aa15.06■□□□□ 0
CLSTN3-216ENST00000545663 FAM172AQ8WUF8 416 aa15.06■□□□□ 0
CLSTN3-216ENST00000545663 CPA5Q8WXQ8 436 aa15.06■□□□□ 0
CLSTN3-216ENST00000545663 NRGNQ92686 78 aa15.06■□□□□ 0
CLSTN3-216ENST00000545663 FER1L6-AS2Q96M78 137 aa15.06■□□□□ 0
CLSTN3-216ENST00000545663 PCMTD1Q96MG8 357 aaPredicted RBP15.06■□□□□ 0
CLSTN3-216ENST00000545663 MCCC1Q96RQ3 725 aaPredicted RBP15.06■□□□□ 0
CLSTN3-216ENST00000545663 RAB33BQ9H082 229 aa15.06■□□□□ 0
CLSTN3-216ENST00000545663 PDCL3Q9H2J4 239 aa15.06■□□□□ 0
CLSTN3-216ENST00000545663 CLSTN2Q9H4D0 955 aa15.06■□□□□ 0
CLSTN3-216ENST00000545663 PCMTD2Q9NV79 361 aa15.06■□□□□ 0
CLSTN3-216ENST00000545663 KIAA1324LA8MWY0 1029 aaPredicted RBP15.05■□□□□ -0
CLSTN3-216ENST00000545663 KLF7O75840 302 aaPredicted RBP15.05■□□□□ -0
CLSTN3-216ENST00000545663 CD44P16070 742 aaKnown RBP15.05■□□□□ -0
CLSTN3-216ENST00000545663 RPL10P27635 214 aaKnown RBP15.05■□□□□ -0
CLSTN3-216ENST00000545663 SDC4P31431 198 aa15.05■□□□□ -0
CLSTN3-216ENST00000545663 HSD11B2P80365 405 aa15.05■□□□□ -0
CLSTN3-216ENST00000545663 ASIC2Q16515 512 aa15.05■□□□□ -0
CLSTN3-216ENST00000545663 PLA2G4EQ3MJ16 856 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms