RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 CLDN6P56747 220 aa7.65□□□□□ -1.18
SNHG1-223ENST00000545440 CDK3Q00526 305 aa7.65□□□□□ -1.18
SNHG1-223ENST00000545440 SLC7A5Q01650 507 aa7.65□□□□□ -1.18
SNHG1-223ENST00000545440 DPTQ07507 201 aa7.65□□□□□ -1.18
SNHG1-223ENST00000545440 ZBTB17Q13105 803 aa7.65□□□□□ -1.18
SNHG1-223ENST00000545440 TARDBPQ13148 414 aaKnown RBP eCLIP7.65□□□□□ -1.18
SNHG1-223ENST00000545440 C1orf61Q13536 156 aa7.65□□□□□ -1.18
SNHG1-223ENST00000545440 PDK1Q15118 436 aa7.65□□□□□ -1.18
SNHG1-223ENST00000545440 SPA17Q15506 151 aa7.65□□□□□ -1.18
SNHG1-223ENST00000545440 SLC14A2Q15849 920 aa7.65□□□□□ -1.18
SNHG1-223ENST00000545440 NKG7Q16617 165 aa7.65□□□□□ -1.18
SNHG1-223ENST00000545440 TAZQ16635 292 aa7.65□□□□□ -1.18
SNHG1-223ENST00000545440 CDKN3Q16667 212 aa7.65□□□□□ -1.18
SNHG1-223ENST00000545440 ODF2Q5BJF6 829 aa7.65□□□□□ -1.18
SNHG1-223ENST00000545440 LRRC66Q68CR7 880 aa7.65□□□□□ -1.18
SNHG1-223ENST00000545440 C11orf63Q6NUN7 778 aa7.65□□□□□ -1.18
SNHG1-223ENST00000545440 GUSBP11Q6P575 273 aa7.65□□□□□ -1.18
SNHG1-223ENST00000545440 ZNF765Q7L2R6 523 aa7.65□□□□□ -1.18
SNHG1-223ENST00000545440 EFL1Q7Z2Z2 1120 aaKnown RBP7.65□□□□□ -1.18
SNHG1-223ENST00000545440 HSD11B1LQ7Z5J1 315 aa7.65□□□□□ -1.18
SNHG1-223ENST00000545440 TSPAN33Q86UF1 283 aa7.65□□□□□ -1.18
SNHG1-223ENST00000545440 HEATR4Q86WZ0 1026 aa7.65□□□□□ -1.18
SNHG1-223ENST00000545440 GKN2Q86XP6 184 aa7.65□□□□□ -1.18
SNHG1-223ENST00000545440 PELI3Q8N2H9 469 aa7.65□□□□□ -1.18
SNHG1-223ENST00000545440 CBARPQ8N350 705 aaPredicted RBP7.65□□□□□ -1.18
SNHG1-223ENST00000545440 CCNYQ8ND76 341 aa7.65□□□□□ -1.18
SNHG1-223ENST00000545440 WDR48Q8TAF3 677 aa7.65□□□□□ -1.18
SNHG1-223ENST00000545440 MAPK15Q8TD08 544 aa7.65□□□□□ -1.18
SNHG1-223ENST00000545440 TSACCQ96A04 125 aaPredicted RBP7.65□□□□□ -1.18
SNHG1-223ENST00000545440 GRAMD1AQ96CP6 724 aa7.65□□□□□ -1.18
SNHG1-223ENST00000545440 PANX2Q96RD6 677 aa7.65□□□□□ -1.18
SNHG1-223ENST00000545440 LYSMD1Q96S90 227 aa7.65□□□□□ -1.18
SNHG1-223ENST00000545440 LGMNQ99538 433 aa7.65□□□□□ -1.18
SNHG1-223ENST00000545440 MAK16Q9BXY0 300 aaKnown RBP7.65□□□□□ -1.18
SNHG1-223ENST00000545440 BRD8Q9H0E9 1235 aa7.65□□□□□ -1.18
SNHG1-223ENST00000545440 HEY1Q9Y5J3 304 aa7.65□□□□□ -1.18
SNHG1-223ENST00000545440 PRSS38A1L453 326 aa7.64□□□□□ -1.19
SNHG1-223ENST00000545440 TMEM202A6NGA9 273 aa7.64□□□□□ -1.19
SNHG1-223ENST00000545440 KCNK1O00180 336 aa7.64□□□□□ -1.19
SNHG1-223ENST00000545440 AGRPO00253 132 aa7.64□□□□□ -1.19
SNHG1-223ENST00000545440 IPO7O95373 1038 aaKnown RBP7.64□□□□□ -1.19
SNHG1-223ENST00000545440 SOD1P00441 154 aa7.64□□□□□ -1.19
SNHG1-223ENST00000545440 PRLP01236 227 aa7.64□□□□□ -1.19
SNHG1-223ENST00000545440 MMP2P08253 660 aa7.64□□□□□ -1.19
SNHG1-223ENST00000545440 MYF5P13349 255 aa7.64□□□□□ -1.19
SNHG1-223ENST00000545440 CTPS1P17812 591 aa7.64□□□□□ -1.19
SNHG1-223ENST00000545440 TGM2P21980 687 aa7.64□□□□□ -1.19
SNHG1-223ENST00000545440 CDKN2BP42772 138 aa7.64□□□□□ -1.19
SNHG1-223ENST00000545440 MAGEA1P43355 309 aa7.64□□□□□ -1.19
SNHG1-223ENST00000545440 NOP2P46087 812 aaKnown RBP7.64□□□□□ -1.19
SNHG1-223ENST00000545440 NR2C2P49116 596 aa7.64□□□□□ -1.19
SNHG1-223ENST00000545440 STC1P52823 247 aa7.64□□□□□ -1.19
SNHG1-223ENST00000545440 CYP4F3Q08477 520 aa7.64□□□□□ -1.19
SNHG1-223ENST00000545440 NIPAL4Q0D2K0 466 aa7.64□□□□□ -1.19
SNHG1-223ENST00000545440 AP1B1Q10567 949 aa7.64□□□□□ -1.19
SNHG1-223ENST00000545440 TFDP2Q14188 446 aa7.64□□□□□ -1.19
SNHG1-223ENST00000545440 IHHQ14623 411 aa7.64□□□□□ -1.19
SNHG1-223ENST00000545440 PRKD1Q15139 912 aaPredicted RBP7.64□□□□□ -1.19
SNHG1-223ENST00000545440 DENND2CQ68D51 928 aa7.64□□□□□ -1.19
SNHG1-223ENST00000545440 KCTD16Q68DU8 428 aa7.64□□□□□ -1.19
SNHG1-223ENST00000545440 RAET1GQ6H3X3 334 aa7.64□□□□□ -1.19
SNHG1-223ENST00000545440 VHLLQ6RSH7 139 aa7.64□□□□□ -1.19
SNHG1-223ENST00000545440 RBM44Q6ZP01 1051 aaKnown RBP7.64□□□□□ -1.19
SNHG1-223ENST00000545440 Q6ZVL8 140 aa7.64□□□□□ -1.19
SNHG1-223ENST00000545440 BZW1Q7L1Q6 419 aaKnown RBP7.64□□□□□ -1.19
SNHG1-223ENST00000545440 RD3Q7Z3Z2 195 aa7.64□□□□□ -1.19
SNHG1-223ENST00000545440 TECPR1Q7Z6L1 1165 aa7.64□□□□□ -1.19
SNHG1-223ENST00000545440 RFX6Q8HWS3 928 aa7.64□□□□□ -1.19
SNHG1-223ENST00000545440 KATNAL2Q8IYT4 538 aa7.64□□□□□ -1.19
SNHG1-223ENST00000545440 ARMC10Q8N2F6 343 aa7.64□□□□□ -1.19
SNHG1-223ENST00000545440 FAM169BQ8N8A8 192 aa7.64□□□□□ -1.19
SNHG1-223ENST00000545440 KYQ8NBH2 561 aa7.64□□□□□ -1.19
SNHG1-223ENST00000545440 OR6C4Q8NGE1 309 aa7.64□□□□□ -1.19
SNHG1-223ENST00000545440 OR1E3Q8WZA6 343 aa7.64□□□□□ -1.19
SNHG1-223ENST00000545440 AP2M1Q96CW1 435 aa7.64□□□□□ -1.19
SNHG1-223ENST00000545440 LGR4Q9BXB1 951 aa7.64□□□□□ -1.19
SNHG1-223ENST00000545440 ADGRE3Q9BY15 652 aa7.64□□□□□ -1.19
SNHG1-223ENST00000545440 FRMD8Q9BZ67 464 aaPredicted RBP7.64□□□□□ -1.19
SNHG1-223ENST00000545440 ABCG4Q9H172 646 aa7.64□□□□□ -1.19
SNHG1-223ENST00000545440 PCDH9Q9HC56 1237 aa7.64□□□□□ -1.19
SNHG1-223ENST00000545440 MRPL40Q9NQ50 206 aaKnown RBP7.64□□□□□ -1.19
SNHG1-223ENST00000545440 CHKBQ9Y259 395 aa7.64□□□□□ -1.19
SNHG1-223ENST00000545440 SLC17A4Q9Y2C5 497 aa7.64□□□□□ -1.19
SNHG1-223ENST00000545440 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.64□□□□□ -1.19
SNHG1-223ENST00000545440 PCDHA13Q9Y5I0 950 aa7.64□□□□□ -1.19
SNHG1-223ENST00000545440 ZFYVE26Q68DK2 2539 aa7.64□□□□□ -1.19
SNHG1-223ENST00000545440 ZFHX4Q86UP3 3567 aa7.64□□□□□ -1.19
SNHG1-223ENST00000545440 LAMA5O15230 3695 aa7.64□□□□□ -1.19
SNHG1-223ENST00000545440 AHCTF1Q8WYP5 2266 aa7.63□□□□□ -1.19
SNHG1-223ENST00000545440 A0A087WV48 116 aa7.63□□□□□ -1.19
SNHG1-223ENST00000545440 C1orf232A0A0U1RR37 186 aa7.63□□□□□ -1.19
SNHG1-223ENST00000545440 CPED1A4D0V7 1026 aa7.63□□□□□ -1.19
SNHG1-223ENST00000545440 GOLGA6CA6NDK9 693 aa7.63□□□□□ -1.19
SNHG1-223ENST00000545440 GOLGA6BA6NDN3 693 aa7.63□□□□□ -1.19
SNHG1-223ENST00000545440 ANKRD66B4E2M5 251 aa7.63□□□□□ -1.19
SNHG1-223ENST00000545440 MTSS1O43312 755 aa7.63□□□□□ -1.19
SNHG1-223ENST00000545440 KLF4O43474 513 aa7.63□□□□□ -1.19
SNHG1-223ENST00000545440 BRINP1O60477 761 aa7.63□□□□□ -1.19
SNHG1-223ENST00000545440 CSO75390 466 aaKnown RBP7.63□□□□□ -1.19
SNHG1-223ENST00000545440 NDUFA10O95299 355 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms