RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 CTAGE15A4D2H0 777 aa14.89□□□□□ -0.03
CD9-210ENST00000543916 SMAPO00193 183 aa14.89□□□□□ -0.03
CD9-210ENST00000543916 TPP1O14773 563 aa14.89□□□□□ -0.03
CD9-210ENST00000543916 SGTAO43765 313 aa14.89□□□□□ -0.03
CD9-210ENST00000543916 ZNF500O60304 480 aaPredicted RBP14.89□□□□□ -0.03
CD9-210ENST00000543916 LDOC1O95751 146 aaPredicted RBP14.89□□□□□ -0.03
CD9-210ENST00000543916 CTAGE8P0CG41 777 aa14.89□□□□□ -0.03
CD9-210ENST00000543916 MYF5P13349 255 aa14.89□□□□□ -0.03
CD9-210ENST00000543916 ACP5P13686 325 aa14.89□□□□□ -0.03
CD9-210ENST00000543916 CEACAM1P13688 526 aa14.89□□□□□ -0.03
CD9-210ENST00000543916 MSH3P20585 1137 aa14.89□□□□□ -0.03
CD9-210ENST00000543916 SLC7A5Q01650 507 aa14.89□□□□□ -0.03
CD9-210ENST00000543916 GTF2H3Q13889 308 aa14.89□□□□□ -0.03
CD9-210ENST00000543916 TRIP6Q15654 476 aaKnown RBP14.89□□□□□ -0.03
CD9-210ENST00000543916 SMAD1Q15797 465 aaKnown RBP14.89□□□□□ -0.03
CD9-210ENST00000543916 ANKRD20A4Q4UJ75 823 aa14.89□□□□□ -0.03
CD9-210ENST00000543916 C6orf132Q5T0Z8 1188 aa14.89□□□□□ -0.03
CD9-210ENST00000543916 ARMC3Q5W041 872 aa14.89□□□□□ -0.03
CD9-210ENST00000543916 ZCCHC8Q6NZY4 707 aaKnown RBP14.89□□□□□ -0.03
CD9-210ENST00000543916 SLC30A9Q6PML9 568 aa14.89□□□□□ -0.03
CD9-210ENST00000543916 LVRNQ6Q4G3 990 aa14.89□□□□□ -0.03
CD9-210ENST00000543916 DET1Q7L5Y6 550 aa14.89□□□□□ -0.03
CD9-210ENST00000543916 C11orf96Q7Z7L8 435 aa14.89□□□□□ -0.03
CD9-210ENST00000543916 CTAGE6Q86UF2 777 aa14.89□□□□□ -0.03
CD9-210ENST00000543916 LRRTM4Q86VH4 590 aa14.89□□□□□ -0.03
CD9-210ENST00000543916 TRAPPC5Q8IUR0 188 aa14.89□□□□□ -0.03
CD9-210ENST00000543916 SFTPA2Q8IWL1 248 aa14.89□□□□□ -0.03
CD9-210ENST00000543916 CTAGE4Q8IX94 777 aa14.89□□□□□ -0.03
CD9-210ENST00000543916 SDR16C5Q8N3Y7 309 aa14.89□□□□□ -0.03
CD9-210ENST00000543916 ZNF669Q96BR6 464 aaPredicted RBP14.89□□□□□ -0.03
CD9-210ENST00000543916 SGSM3Q96HU1 749 aa14.89□□□□□ -0.03
CD9-210ENST00000543916 APOLD1Q96LR9 279 aa14.89□□□□□ -0.03
CD9-210ENST00000543916 TTC25Q96NG3 672 aa14.89□□□□□ -0.03
CD9-210ENST00000543916 COPS8Q99627 209 aa14.89□□□□□ -0.03
CD9-210ENST00000543916 CDC6Q99741 560 aa14.89□□□□□ -0.03
CD9-210ENST00000543916 DUSP23Q9BVJ7 150 aa14.89□□□□□ -0.03
CD9-210ENST00000543916 GSDMCQ9BYG8 508 aa14.89□□□□□ -0.03
CD9-210ENST00000543916 RAB17Q9H0T7 212 aa14.89□□□□□ -0.03
CD9-210ENST00000543916 SPATS2LQ9NUQ6 558 aaKnown RBP14.89□□□□□ -0.03
CD9-210ENST00000543916 WHRNQ9P202 907 aa14.89□□□□□ -0.03
CD9-210ENST00000543916 MARCH4Q9P2E8 410 aaPredicted RBP14.89□□□□□ -0.03
CD9-210ENST00000543916 SLC23A2Q9UGH3 650 aa14.89□□□□□ -0.03
CD9-210ENST00000543916 GPR34Q9UPC5 381 aa14.89□□□□□ -0.03
CD9-210ENST00000543916 KCNK6Q9Y257 313 aa14.89□□□□□ -0.03
CD9-210ENST00000543916 UTP11Q9Y3A2 253 aaKnown RBP14.89□□□□□ -0.03
CD9-210ENST00000543916 MAD1L1Q9Y6D9 718 aa14.89□□□□□ -0.03
CD9-210ENST00000543916 U3KQA8 63 aa14.89□□□□□ -0.03
CD9-210ENST00000543916 CABIN1Q9Y6J0 2220 aa14.89□□□□□ -0.03
CD9-210ENST00000543916 ARID1BQ8NFD5 2236 aaPredicted RBP14.88□□□□□ -0.03
CD9-210ENST00000543916 MAGEB16A2A368 324 aa14.88□□□□□ -0.03
CD9-210ENST00000543916 OR2AG2A6NM03 316 aa14.88□□□□□ -0.03
CD9-210ENST00000543916 KMOO15229 486 aa14.88□□□□□ -0.03
CD9-210ENST00000543916 VAPBO95292 243 aa14.88□□□□□ -0.03
CD9-210ENST00000543916 ZNF7P17097 686 aaPredicted RBP14.88□□□□□ -0.03
CD9-210ENST00000543916 KCNA4P22459 653 aa14.88□□□□□ -0.03
CD9-210ENST00000543916 ACTR1BP42025 376 aa14.88□□□□□ -0.03
CD9-210ENST00000543916 ACTR1AP61163 376 aa14.88□□□□□ -0.03
CD9-210ENST00000543916 DNAJC3Q13217 504 aa14.88□□□□□ -0.03
CD9-210ENST00000543916 LRP8Q14114 963 aa14.88□□□□□ -0.03
CD9-210ENST00000543916 TRADDQ15628 312 aa14.88□□□□□ -0.03
CD9-210ENST00000543916 HIF1AQ16665 826 aa14.88□□□□□ -0.03
CD9-210ENST00000543916 BBS9Q3SYG4 887 aa14.88□□□□□ -0.03
CD9-210ENST00000543916 DNAJC21Q5F1R6 531 aaKnown RBP14.88□□□□□ -0.03
CD9-210ENST00000543916 KIAA0930Q6ICG6 404 aaPredicted RBP14.88□□□□□ -0.03
CD9-210ENST00000543916 TMEM220Q6QAJ8 160 aa14.88□□□□□ -0.03
CD9-210ENST00000543916 GLRX5Q86SX6 157 aa14.88□□□□□ -0.03
CD9-210ENST00000543916 TMEM135Q86UB9 458 aa14.88□□□□□ -0.03
CD9-210ENST00000543916 IGDCC3Q8IVU1 814 aa14.88□□□□□ -0.03
CD9-210ENST00000543916 SLC35F3Q8IY50 421 aa14.88□□□□□ -0.03
CD9-210ENST00000543916 FAM181AQ8N9Y4 354 aa14.88□□□□□ -0.03
CD9-210ENST00000543916 KYQ8NBH2 561 aa14.88□□□□□ -0.03
CD9-210ENST00000543916 BBOF1Q8ND07 529 aa14.88□□□□□ -0.03
CD9-210ENST00000543916 FAM46DQ8NEK8 389 aa14.88□□□□□ -0.03
CD9-210ENST00000543916 SGF29Q96ES7 293 aa14.88□□□□□ -0.03
CD9-210ENST00000543916 STAMBPL1Q96FJ0 436 aa14.88□□□□□ -0.03
CD9-210ENST00000543916 WDR83Q9BRX9 315 aaKnown RBP14.88□□□□□ -0.03
CD9-210ENST00000543916 CARD6Q9BX69 1037 aa14.88□□□□□ -0.03
CD9-210ENST00000543916 CATSPERZQ9NTU4 200 aa14.88□□□□□ -0.03
CD9-210ENST00000543916 TOR4AQ9NXH8 423 aa14.88□□□□□ -0.03
CD9-210ENST00000543916 IL1RAPL1Q9NZN1 696 aa14.88□□□□□ -0.03
CD9-210ENST00000543916 TAAR2Q9P1P5 351 aa14.88□□□□□ -0.03
CD9-210ENST00000543916 SIRPGQ9P1W8 387 aa14.88□□□□□ -0.03
CD9-210ENST00000543916 ZCWPW2A0A1B0GU75 182 aa14.87□□□□□ -0.03
CD9-210ENST00000543916 ESPNB1AK53 854 aa14.87□□□□□ -0.03
CD9-210ENST00000543916 B4DGG1 531 aa14.87□□□□□ -0.03
CD9-210ENST00000543916 GOLGA8KD6RF30 607 aa14.87□□□□□ -0.03
CD9-210ENST00000543916 GOLGA8TH3BQL2 631 aa14.87□□□□□ -0.03
CD9-210ENST00000543916 TNFSF14O43557 240 aa14.87□□□□□ -0.03
CD9-210ENST00000543916 ARCN1P48444 511 aaKnown RBP14.87□□□□□ -0.03
CD9-210ENST00000543916 ARL4CP56559 192 aa14.87□□□□□ -0.03
CD9-210ENST00000543916 CALCOCO2Q13137 446 aa14.87□□□□□ -0.03
CD9-210ENST00000543916 INSCQ1MX18 579 aa14.87□□□□□ -0.03
CD9-210ENST00000543916 FASTKD1Q53R41 847 aaKnown RBP14.87□□□□□ -0.03
CD9-210ENST00000543916 PPM1JQ5JR12 505 aa14.87□□□□□ -0.03
CD9-210ENST00000543916 HP1BP3Q5SSJ5 553 aaPredicted RBP14.87□□□□□ -0.03
CD9-210ENST00000543916 LDB1Q86U70 411 aaPredicted RBP14.87□□□□□ -0.03
CD9-210ENST00000543916 PDIK1LQ8N165 341 aa14.87□□□□□ -0.03
CD9-210ENST00000543916 BEND7Q8N7W2 519 aaPredicted RBP14.87□□□□□ -0.03
CD9-210ENST00000543916 CEP112Q8N8E3 955 aa14.87□□□□□ -0.03
CD9-210ENST00000543916 SCG3Q8WXD2 468 aaKnown RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms