RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 A0A087X1B8 175 aa12.57□□□□□ -0.4
SMG8-202ENST00000543872 A8MX80 341 aa12.57□□□□□ -0.4
SMG8-202ENST00000543872 EFCAB9A8MZ26 197 aa12.57□□□□□ -0.4
SMG8-202ENST00000543872 UBXN8O00124 270 aa12.57□□□□□ -0.4
SMG8-202ENST00000543872 PMPCBO75439 489 aa12.57□□□□□ -0.4
SMG8-202ENST00000543872 GOT2P00505 430 aaKnown RBP12.57□□□□□ -0.4
SMG8-202ENST00000543872 CD36P16671 472 aa12.57□□□□□ -0.4
SMG8-202ENST00000543872 EPS8Q12929 822 aa12.57□□□□□ -0.4
SMG8-202ENST00000543872 LAPTM4AQ15012 233 aa12.57□□□□□ -0.4
SMG8-202ENST00000543872 NAPEPLDQ6IQ20 393 aa12.57□□□□□ -0.4
SMG8-202ENST00000543872 PKN3Q6P5Z2 889 aa12.57□□□□□ -0.4
SMG8-202ENST00000543872 BLOC1S3Q6QNY0 202 aa12.57□□□□□ -0.4
SMG8-202ENST00000543872 ARHGAP36Q6ZRI8 547 aa12.57□□□□□ -0.4
SMG8-202ENST00000543872 BEND5Q7L4P6 421 aa12.57□□□□□ -0.4
SMG8-202ENST00000543872 FAM151AQ8WW52 585 aa12.57□□□□□ -0.4
SMG8-202ENST00000543872 LPAR1Q92633 364 aa12.57□□□□□ -0.4
SMG8-202ENST00000543872 VPS35Q96QK1 796 aa12.57□□□□□ -0.4
SMG8-202ENST00000543872 TRMT13Q9NUP7 481 aaKnown RBP12.57□□□□□ -0.4
SMG8-202ENST00000543872 LIMD1Q9UGP4 676 aa12.57□□□□□ -0.4
SMG8-202ENST00000543872 PRMT5O14744 637 aaPredicted RBP12.56□□□□□ -0.4
SMG8-202ENST00000543872 SCO2O43819 266 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 C1RP00736 705 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 CLCNKBP51801 687 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 ARPP19P56211 112 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 TMEM132DQ14C87 1099 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 CLCA4Q14CN2 919 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 UNC50Q53HI1 259 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 TRAF7Q6Q0C0 670 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 PAPD5Q8NDF8 572 aaKnown RBP12.56□□□□□ -0.4
SMG8-202ENST00000543872 BEST2Q8NFU1 509 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 OR10Q1Q8NGQ4 319 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 TRIM54Q9BYV2 358 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 ISPDA4D126 451 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 CCL22O00626 93 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 AZIN1O14977 448 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 GSTA4O15217 222 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 MITFO75030 526 aaPredicted RBP12.56□□□□□ -0.4
SMG8-202ENST00000543872 CDK14O94921 469 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 MYCP01106 439 aaPredicted RBP12.56□□□□□ -0.4
SMG8-202ENST00000543872 MT-ND2P03891 347 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 DNTTP04053 509 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 RBP1P09455 135 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 ARNTP27540 789 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 POLD2P49005 469 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 CSRP3P50461 194 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 ATP4BP51164 291 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 SNX16P57768 344 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 ISL1P61371 349 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 CDK5R2Q13319 367 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 AGAP6Q5VW22 663 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 KCTD11Q693B1 232 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 DTWD1Q8N5C7 304 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 PTGR2Q8N8N7 351 aaPredicted RBP12.56□□□□□ -0.4
SMG8-202ENST00000543872 CENPIQ92674 756 aaPredicted RBP12.56□□□□□ -0.4
SMG8-202ENST00000543872 PMEPA1Q969W9 287 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 MAP6Q96JE9 813 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 AGAP4Q96P64 663 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 DHRS9Q9BPW9 319 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 FICDQ9BVA6 458 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 ZBTB20Q9HC78 741 aaPredicted RBP12.56□□□□□ -0.4
SMG8-202ENST00000543872 C14orf119Q9NWQ9 140 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 MAP3K20Q9NYL2 800 aaKnown RBP12.56□□□□□ -0.4
SMG8-202ENST00000543872 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.56□□□□□ -0.4
SMG8-202ENST00000543872 A0A1W2PP18 115 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 ACKR2O00590 384 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 ZW10O43264 779 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 USP2O75604 605 aaPredicted RBP12.56□□□□□ -0.4
SMG8-202ENST00000543872 MSL3P1P0C860 447 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 IMPDH1P20839 514 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 CLCN3P51790 818 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 TPI1P60174 286 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 GHRHRQ02643 423 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 TOP3AQ13472 1001 aaPredicted RBP12.56□□□□□ -0.4
SMG8-202ENST00000543872 RAPSNQ13702 412 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 SMN1Q16637 294 aaKnown RBP12.56□□□□□ -0.4
SMG8-202ENST00000543872 FSCN1Q16658 493 aaKnown RBP12.56□□□□□ -0.4
SMG8-202ENST00000543872 PFKFB4Q16877 469 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 ZNF404Q494X3 552 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 ENPP6Q6UWR7 440 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 LACC1Q8IV20 430 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 SULF1Q8IWU6 871 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 ZNF540Q8NDQ6 660 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 GIPC2Q8TF65 315 aa12.56□□□□□ -0.4
SMG8-202ENST00000543872 ZNF300Q96RE9 604 aaPredicted RBP12.56□□□□□ -0.4
SMG8-202ENST00000543872 EIF3LQ9Y262 564 aaKnown RBP12.56□□□□□ -0.4
SMG8-202ENST00000543872 MAFO75444 373 aaPredicted RBP12.55□□□□□ -0.4
SMG8-202ENST00000543872 LCKP06239 509 aa12.55□□□□□ -0.4
SMG8-202ENST00000543872 RAP2AP10114 183 aa12.55□□□□□ -0.4
SMG8-202ENST00000543872 NOMO2Q5JPE7 1267 aa12.55□□□□□ -0.4
SMG8-202ENST00000543872 PCID2Q5JVF3 399 aa12.55□□□□□ -0.4
SMG8-202ENST00000543872 IER5Q5VY09 327 aa12.55□□□□□ -0.4
SMG8-202ENST00000543872 PDZD4Q76G19 769 aaPredicted RBP12.55□□□□□ -0.4
SMG8-202ENST00000543872 NLGN4XQ8N0W4 816 aa12.55□□□□□ -0.4
SMG8-202ENST00000543872 NPWQ8N729 165 aa12.55□□□□□ -0.4
SMG8-202ENST00000543872 PCYT2Q99447 389 aa12.55□□□□□ -0.4
SMG8-202ENST00000543872 KIFC1Q9BW19 673 aa12.55□□□□□ -0.4
SMG8-202ENST00000543872 BTBD2Q9BX70 525 aa12.55□□□□□ -0.4
SMG8-202ENST00000543872 FAM49AQ9H0Q0 323 aaPredicted RBP12.55□□□□□ -0.4
SMG8-202ENST00000543872 RPRD1BQ9NQG5 326 aaKnown RBP12.55□□□□□ -0.4
SMG8-202ENST00000543872 POLG2Q9UHN1 485 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms