RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 CETN1Q12798 172 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 FGL2Q14314 439 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 TSC22D1Q15714 1073 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 SLC15A2Q16348 729 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 MMEL1Q495T6 779 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 C5orf22Q49AR2 442 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 ERAP2Q6P179 960 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 FIP1L1Q6UN15 594 aaKnown RBP5.87□□□□□ -1.47
XRCC4-206ENST00000542685 CENPUQ71F23 418 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 PARS2Q7L3T8 475 aaKnown RBP5.87□□□□□ -1.47
XRCC4-206ENST00000542685 CHST3Q7LGC8 479 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 DHDDSQ86SQ9 333 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 C14orf80Q86SX3 495 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 LRRC6Q86X45 466 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 ZNF354CQ86Y25 554 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 ZNF280BQ86YH2 543 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 SCYL3Q8IZE3 742 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 TTC5Q8N0Z6 440 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 RASGEF1CQ8N431 466 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 SRBD1Q8N5C6 995 aaKnown RBP5.87□□□□□ -1.47
XRCC4-206ENST00000542685 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.87□□□□□ -1.47
XRCC4-206ENST00000542685 ICA1LQ8NDH6 482 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 RBM15BQ8NDT2 890 aaKnown RBP5.87□□□□□ -1.47
XRCC4-206ENST00000542685 OR10Z1Q8NGY1 313 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 ADAMTS16Q8TE57 1224 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 FAM172AQ8WUF8 416 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 ZFPM2Q8WW38 1151 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 PMM1Q92871 262 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 CIDECQ96AQ7 238 aaPredicted RBP5.87□□□□□ -1.47
XRCC4-206ENST00000542685 REXO5Q96IC2 774 aaKnown RBP5.87□□□□□ -1.47
XRCC4-206ENST00000542685 METTL2AQ96IZ6 378 aaKnown RBP5.87□□□□□ -1.47
XRCC4-206ENST00000542685 TNIP3Q96KP6 325 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 TTC25Q96NG3 672 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 MTMR9Q96QG7 549 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 TSG101Q99816 390 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 ISCA1Q9BUE6 129 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 QTRT1Q9BXR0 403 aaKnown RBP5.87□□□□□ -1.47
XRCC4-206ENST00000542685 CADM1Q9BY67 442 aaKnown RBP5.87□□□□□ -1.47
XRCC4-206ENST00000542685 MRPL9Q9BYD2 267 aaKnown RBP5.87□□□□□ -1.47
XRCC4-206ENST00000542685 MROQ9BYG7 248 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 PITPNM3Q9BZ71 974 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 SEMA4CQ9C0C4 833 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 DNAI2Q9GZS0 605 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 CLPBQ9H078 707 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 NT5C3AQ9H0P0 336 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 SNX25Q9H3E2 840 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 DNAJC18Q9H819 358 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 CD93Q9NPY3 652 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 PPP1R14DQ9NXH3 145 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 SLC39A1Q9NY26 324 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 MAP3K20Q9NYL2 800 aaKnown RBP5.87□□□□□ -1.47
XRCC4-206ENST00000542685 TAS2R7Q9NYW3 318 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 EMC3Q9P0I2 261 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 ASIC3Q9UHC3 531 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 LGALS13Q9UHV8 139 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 HAO1Q9UJM8 370 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 ADAMTS5Q9UNA0 930 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 CHKBQ9Y259 395 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 MED16Q9Y2X0 877 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 CEPT1Q9Y6K0 416 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 COL1A1P02452 1464 aaPredicted RBP5.87□□□□□ -1.47
XRCC4-206ENST00000542685 PHLPP1O60346 1717 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 CCDC88AQ3V6T2 1871 aa5.87□□□□□ -1.47
XRCC4-206ENST00000542685 ZNFX1Q9P2E3 1918 aaKnown RBP5.86□□□□□ -1.47
XRCC4-206ENST00000542685 NUP98P52948 1817 aa5.86□□□□□ -1.47
XRCC4-206ENST00000542685 TRIM64BA6NI03 449 aa5.86□□□□□ -1.47
XRCC4-206ENST00000542685 PRRT4C9JH25 899 aa5.86□□□□□ -1.47
XRCC4-206ENST00000542685 NCAM2O15394 837 aa5.86□□□□□ -1.47
XRCC4-206ENST00000542685 IL1BP01584 269 aa5.86□□□□□ -1.47
XRCC4-206ENST00000542685 PCCAP05165 728 aaPredicted RBP5.86□□□□□ -1.47
XRCC4-206ENST00000542685 RPS17P08708 135 aaKnown RBP5.86□□□□□ -1.47
XRCC4-206ENST00000542685 NPSP0C0P6 89 aa5.86□□□□□ -1.47
XRCC4-206ENST00000542685 T-ENOLP0DO92 83 aa5.86□□□□□ -1.47
XRCC4-206ENST00000542685 PRKACAP17612 351 aa5.86□□□□□ -1.47
XRCC4-206ENST00000542685 TCEA1P23193 301 aaKnown RBP5.86□□□□□ -1.47
XRCC4-206ENST00000542685 SLC11A2P49281 568 aa5.86□□□□□ -1.47
XRCC4-206ENST00000542685 ETV1P50549 477 aa5.86□□□□□ -1.47
XRCC4-206ENST00000542685 NEK3P51956 506 aa5.86□□□□□ -1.47
XRCC4-206ENST00000542685 ESRRGP62508 458 aa5.86□□□□□ -1.47
XRCC4-206ENST00000542685 SSBP2P81877 361 aaPredicted RBP5.86□□□□□ -1.47
XRCC4-206ENST00000542685 HOXA4Q00056 320 aaPredicted RBP5.86□□□□□ -1.47
XRCC4-206ENST00000542685 KRT17Q04695 432 aa5.86□□□□□ -1.47
XRCC4-206ENST00000542685 COASYQ13057 564 aa5.86□□□□□ -1.47
XRCC4-206ENST00000542685 MRPL28Q13084 256 aaKnown RBP5.86□□□□□ -1.47
XRCC4-206ENST00000542685 STX3Q13277 289 aa5.86□□□□□ -1.47
XRCC4-206ENST00000542685 ORC2Q13416 577 aaPredicted RBP5.86□□□□□ -1.47
XRCC4-206ENST00000542685 GNA13Q14344 377 aa5.86□□□□□ -1.47
XRCC4-206ENST00000542685 PSMD6Q15008 389 aa5.86□□□□□ -1.47
XRCC4-206ENST00000542685 OXA1LQ15070 435 aa5.86□□□□□ -1.47
XRCC4-206ENST00000542685 NPTX1Q15818 432 aa5.86□□□□□ -1.47
XRCC4-206ENST00000542685 TRIM16LQ309B1 348 aa5.86□□□□□ -1.47
XRCC4-206ENST00000542685 CORO6Q6QEF8 472 aa5.86□□□□□ -1.47
XRCC4-206ENST00000542685 USP43Q70EL4 1123 aa5.86□□□□□ -1.47
XRCC4-206ENST00000542685 NEK8Q86SG6 692 aa5.86□□□□□ -1.47
XRCC4-206ENST00000542685 SNX32Q86XE0 403 aa5.86□□□□□ -1.47
XRCC4-206ENST00000542685 MICU3Q86XE3 530 aa5.86□□□□□ -1.47
XRCC4-206ENST00000542685 PM20D2Q8IYS1 436 aa5.86□□□□□ -1.47
XRCC4-206ENST00000542685 SLC15A4Q8N697 577 aa5.86□□□□□ -1.47
XRCC4-206ENST00000542685 PNLDC1Q8NA58 520 aaKnown RBP5.86□□□□□ -1.47
XRCC4-206ENST00000542685 RP9Q8TA86 221 aaKnown RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms