RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 NMUR1Q9HB89 426 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 SMYD2Q9NRG4 433 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 PNPOQ9NVS9 261 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 GMEB2Q9UKD1 530 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 MAPRE3Q9UPY8 281 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 PCDHB7Q9Y5E2 793 aa7.95□□□□□ -1.14
PDLIM5-221ENST00000542407 TTC3P53804 2025 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 A6NL46 340 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 POLR1CO15160 346 aaPredicted RBP7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 PI15O43692 258 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 KRT37O76014 449 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 ALX3O95076 343 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 CCL5P13501 91 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 PRKCAP17252 672 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 XRCC1P18887 633 aaPredicted RBP7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 CD247P20963 164 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 NR4A1P22736 598 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 CTHP32929 405 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 SERPINB5P36952 375 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 GRIK1P39086 918 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 MAGEA11P43364 429 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 ARFIP1P53367 373 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 RPL10AP62906 217 aaKnown RBP7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 SGCGQ13326 291 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 TEX44Q53QW1 395 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 FGD3Q5JSP0 725 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 RTP2Q5QGT7 225 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 MANEALQ5VSG8 457 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 FAM205BPQ63HN1 556 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 DCP1BQ8IZD4 617 aaKnown RBP7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 ZNF786Q8N393 782 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 PIWIL2Q8TC59 973 aaKnown RBP7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 P2RY11Q96G91 374 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 YME1L1Q96TA2 773 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 PSD2Q9BQI7 771 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 TRIM15Q9C019 465 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 OSBPL2Q9H1P3 480 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 PRDM12Q9H4Q4 367 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 WDCPQ9H6R7 721 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 SCML2Q9UQR0 700 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 ERVK-19Q9WJR5 959 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 RAD54BQ9Y620 910 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 LTBP2Q14767 1821 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 GOLGA8QA0A0J9YX86 632 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 FAM92AA1XBS5 289 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 GOLGA8OA6NCC3 632 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 GOLGA8NF8WBI6 632 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 AQP9O43315 295 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 SSX5O60225 188 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 PQBP1O60828 265 aaKnown RBP7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 TADA2AO75478 443 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 LRIG2O94898 1065 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 COX4I1P13073 169 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 ALOX12P18054 663 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 ALDH3B2P48448 385 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 BMXP51813 675 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 GNG2P59768 71 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 CTBSQ01459 385 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 TRAF2Q12933 501 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 AARDQ4LEZ3 155 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 FASTKD1Q53R41 847 aaKnown RBP7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 PERM1Q5SV97 790 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 PXDC1Q5TGL8 231 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 SDHAF4Q5VUM1 108 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 AADACL4Q5VUY2 407 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 HEATR6Q6AI08 1181 aaKnown RBP7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 CCDC28AQ8IWP9 274 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 FAM156AQ8NDB6 213 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 IL17RDQ8NFM7 739 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 OPALINQ96PE5 141 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 FAM193BQ96PV7 902 aaPredicted RBP7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 TRIM62Q9BVG3 475 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 FRMD8Q9BZ67 464 aaPredicted RBP7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 KCNN2Q9H2S1 579 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 CRISPLD1Q9H336 500 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 COQ10BQ9H8M1 238 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 ABCC13Q9NSE7 274 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 KIF17Q9P2E2 1029 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 FAM8A1Q9UBU6 413 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 OR12D3Q9UGF7 316 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 DAPK2Q9UIK4 370 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 MICAL3Q7RTP6 2002 aa7.94□□□□□ -1.14
PDLIM5-221ENST00000542407 A0A1W2PQH9 124 aa7.93□□□□□ -1.14
PDLIM5-221ENST00000542407 C7orf72A4D263 438 aa7.93□□□□□ -1.14
PDLIM5-221ENST00000542407 RNF103O00237 685 aa7.93□□□□□ -1.14
PDLIM5-221ENST00000542407 CACNB4O00305 520 aaPredicted RBP7.93□□□□□ -1.14
PDLIM5-221ENST00000542407 ADAM11O75078 769 aa7.93□□□□□ -1.14
PDLIM5-221ENST00000542407 ESRRBO95718 433 aa7.93□□□□□ -1.14
PDLIM5-221ENST00000542407 IL1BP01584 269 aa7.93□□□□□ -1.14
PDLIM5-221ENST00000542407 HMGN1P05114 100 aa7.93□□□□□ -1.14
PDLIM5-221ENST00000542407 GALTP07902 379 aa7.93□□□□□ -1.14
PDLIM5-221ENST00000542407 ENO3P13929 434 aaPredicted RBP7.93□□□□□ -1.14
PDLIM5-221ENST00000542407 CD1EP15812 388 aa7.93□□□□□ -1.14
PDLIM5-221ENST00000542407 RPS2P15880 293 aaKnown RBP7.93□□□□□ -1.14
PDLIM5-221ENST00000542407 PRDX6P30041 224 aa7.93□□□□□ -1.14
PDLIM5-221ENST00000542407 ACSL1P33121 698 aa7.93□□□□□ -1.14
PDLIM5-221ENST00000542407 GRIA1P42261 906 aa7.93□□□□□ -1.14
PDLIM5-221ENST00000542407 ARHGDIAP52565 204 aa7.93□□□□□ -1.14
PDLIM5-221ENST00000542407 TPI1P60174 286 aa7.93□□□□□ -1.14
PDLIM5-221ENST00000542407 GALNT2Q10471 571 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms