RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 HIPK3Q9H422 1215 aa15.96■□□□□ 0.15
VARS2-212ENST00000542001 RP1L1Q8IWN7 2480 aaPredicted RBP15.96■□□□□ 0.15
VARS2-212ENST00000542001 RFXANKO14593 260 aa15.96■□□□□ 0.15
VARS2-212ENST00000542001 OTCP00480 354 aa15.96■□□□□ 0.15
VARS2-212ENST00000542001 IMPDH1P20839 514 aa15.96■□□□□ 0.15
VARS2-212ENST00000542001 RPL10P27635 214 aaKnown RBP15.96■□□□□ 0.15
VARS2-212ENST00000542001 SCNN1AP37088 669 aa15.96■□□□□ 0.15
VARS2-212ENST00000542001 POLD2P49005 469 aa15.96■□□□□ 0.15
VARS2-212ENST00000542001 HK2P52789 917 aa15.96■□□□□ 0.15
VARS2-212ENST00000542001 NUP107P57740 925 aa15.96■□□□□ 0.15
VARS2-212ENST00000542001 C1QTNF8P60827 252 aa15.96■□□□□ 0.15
VARS2-212ENST00000542001 UBE2R2Q712K3 238 aaPredicted RBP15.96■□□□□ 0.15
VARS2-212ENST00000542001 C8orf59Q8N0T1 100 aaPredicted RBP15.96■□□□□ 0.15
VARS2-212ENST00000542001 ADAMTSL1Q8N6G6 1762 aa15.96■□□□□ 0.15
VARS2-212ENST00000542001 TRIB2Q92519 343 aa15.96■□□□□ 0.15
VARS2-212ENST00000542001 NSUN3Q9H649 340 aaKnown RBP15.96■□□□□ 0.15
VARS2-212ENST00000542001 TLR6Q9Y2C9 796 aa15.96■□□□□ 0.15
VARS2-212ENST00000542001 COMMD3-BMI1R4GMX3 469 aa15.96■□□□□ 0.15
VARS2-212ENST00000542001 NUP214P35658 2090 aaPredicted RBP15.96■□□□□ 0.14
VARS2-212ENST00000542001 OR6C75A6NL08 312 aa15.95■□□□□ 0.14
VARS2-212ENST00000542001 SLC38A8A6NNN8 435 aa15.95■□□□□ 0.14
VARS2-212ENST00000542001 MTHFRP42898 656 aa15.95■□□□□ 0.14
VARS2-212ENST00000542001 CWF19L1Q69YN2 538 aaKnown RBP15.95■□□□□ 0.14
VARS2-212ENST00000542001 ABRAXAS1Q6UWZ7 409 aa15.95■□□□□ 0.14
VARS2-212ENST00000542001 TNIP2Q8NFZ5 429 aa15.95■□□□□ 0.14
VARS2-212ENST00000542001 UGT2B28Q9BY64 529 aa15.95■□□□□ 0.14
VARS2-212ENST00000542001 ATP13A3Q9H7F0 1226 aa15.95■□□□□ 0.14
VARS2-212ENST00000542001 CNOT6Q9ULM6 557 aaKnown RBP15.95■□□□□ 0.14
VARS2-212ENST00000542001 TNPO3Q9Y5L0 923 aaKnown RBP15.95■□□□□ 0.14
VARS2-212ENST00000542001 NPHS1O60500 1241 aa15.95■□□□□ 0.14
VARS2-212ENST00000542001 AOC2O75106 756 aa15.95■□□□□ 0.14
VARS2-212ENST00000542001 MYCLP1P12525 358 aaPredicted RBP15.95■□□□□ 0.14
VARS2-212ENST00000542001 CAMK2GQ13555 558 aaPredicted RBP15.95■□□□□ 0.14
VARS2-212ENST00000542001 ADRM1Q16186 407 aa15.95■□□□□ 0.14
VARS2-212ENST00000542001 FGD3Q5JSP0 725 aa15.95■□□□□ 0.14
VARS2-212ENST00000542001 TLDC1Q6P9B6 456 aa15.95■□□□□ 0.14
VARS2-212ENST00000542001 APLFQ8IW19 511 aaPredicted RBP15.95■□□□□ 0.14
VARS2-212ENST00000542001 AURKBQ96GD4 344 aaPredicted RBP15.95■□□□□ 0.14
VARS2-212ENST00000542001 SH3GL1Q99961 368 aa15.95■□□□□ 0.14
VARS2-212ENST00000542001 GORASP1Q9BQQ3 440 aa15.95■□□□□ 0.14
VARS2-212ENST00000542001 CACNA2D2Q9NY47 1150 aa15.95■□□□□ 0.14
VARS2-212ENST00000542001 NUMBLQ9Y6R0 609 aa15.95■□□□□ 0.14
VARS2-212ENST00000542001 COL2A1P02458 1487 aaPredicted RBP15.95■□□□□ 0.14
VARS2-212ENST00000542001 FFAR2O15552 330 aa15.95■□□□□ 0.14
VARS2-212ENST00000542001 PRKACGP22612 351 aa15.95■□□□□ 0.14
VARS2-212ENST00000542001 SLC16A1P53985 500 aa15.95■□□□□ 0.14
VARS2-212ENST00000542001 HERVK_113P63132 956 aa15.95■□□□□ 0.14
VARS2-212ENST00000542001 TLR1Q15399 786 aa15.95■□□□□ 0.14
VARS2-212ENST00000542001 CRTC3Q6UUV7 619 aa15.95■□□□□ 0.14
VARS2-212ENST00000542001 GPR180Q86V85 440 aa15.95■□□□□ 0.14
VARS2-212ENST00000542001 PDSS2Q86YH6 399 aa15.95■□□□□ 0.14
VARS2-212ENST00000542001 ZNF614Q8N883 585 aa15.95■□□□□ 0.14
VARS2-212ENST00000542001 RORBQ92753 470 aa15.95■□□□□ 0.14
VARS2-212ENST00000542001 ERVK-6Q9BXR3 956 aa15.95■□□□□ 0.14
VARS2-212ENST00000542001 SMOC2Q9H3U7 446 aa15.95■□□□□ 0.14
VARS2-212ENST00000542001 hCG_2039718K7EN88 272 aa15.94■□□□□ 0.14
VARS2-212ENST00000542001 C21orf59P57076 290 aa15.94■□□□□ 0.14
VARS2-212ENST00000542001 IFNL1Q8IU54 200 aa15.94■□□□□ 0.14
VARS2-212ENST00000542001 ZC3H7AQ8IWR0 971 aaKnown RBP15.94■□□□□ 0.14
VARS2-212ENST00000542001 STK40Q8N2I9 435 aa15.94■□□□□ 0.14
VARS2-212ENST00000542001 TMEM132CQ8N3T6 1108 aa15.94■□□□□ 0.14
VARS2-212ENST00000542001 EURLQ9NYK6 297 aa15.94■□□□□ 0.14
VARS2-212ENST00000542001 DLGAP3O95886 979 aa15.94■□□□□ 0.14
VARS2-212ENST00000542001 ANXA6P08133 673 aa15.94■□□□□ 0.14
VARS2-212ENST00000542001 RPIAP49247 311 aa15.94■□□□□ 0.14
VARS2-212ENST00000542001 NDST2P52849 883 aa15.94■□□□□ 0.14
VARS2-212ENST00000542001 IKBKEQ14164 716 aa15.94■□□□□ 0.14
VARS2-212ENST00000542001 FBXL20Q96IG2 436 aa15.94■□□□□ 0.14
VARS2-212ENST00000542001 ADI1Q9BV57 179 aa15.94■□□□□ 0.14
VARS2-212ENST00000542001 TMEM30AQ9NV96 361 aa15.94■□□□□ 0.14
VARS2-212ENST00000542001 STRCQ7RTU9 1775 aa15.94■□□□□ 0.14
VARS2-212ENST00000542001 LTBP3Q9NS15 1303 aa15.94■□□□□ 0.14
VARS2-212ENST00000542001 GLYATL1P3A0A0U1RQE8 302 aa15.94■□□□□ 0.14
VARS2-212ENST00000542001 KPNA5O15131 536 aa15.94■□□□□ 0.14
VARS2-212ENST00000542001 TRMUO75648 421 aaKnown RBP15.94■□□□□ 0.14
VARS2-212ENST00000542001 ZNF865P0CJ78 1059 aaPredicted RBP15.94■□□□□ 0.14
VARS2-212ENST00000542001 CYP2A7P20853 494 aa15.94■□□□□ 0.14
VARS2-212ENST00000542001 ALDH6A1Q02252 535 aaKnown RBP15.94■□□□□ 0.14
VARS2-212ENST00000542001 OGFOD2Q6N063 350 aa15.94■□□□□ 0.14
VARS2-212ENST00000542001 ZNF483Q8TF39 744 aaPredicted RBP15.94■□□□□ 0.14
VARS2-212ENST00000542001 ING5Q8WYH8 240 aa15.94■□□□□ 0.14
VARS2-212ENST00000542001 CENPIQ92674 756 aaPredicted RBP15.94■□□□□ 0.14
VARS2-212ENST00000542001 RTP4Q96DX8 246 aa15.94■□□□□ 0.14
VARS2-212ENST00000542001 MRPL9Q9BYD2 267 aaKnown RBP15.94■□□□□ 0.14
VARS2-212ENST00000542001 MRPS26Q9BYN8 205 aaKnown RBP15.94■□□□□ 0.14
VARS2-212ENST00000542001 CHCHD3Q9NX63 227 aaKnown RBP15.94■□□□□ 0.14
VARS2-212ENST00000542001 GNPTGQ9UJJ9 305 aa15.94■□□□□ 0.14
VARS2-212ENST00000542001 LIN7AO14910 233 aaPredicted RBP15.94■□□□□ 0.14
VARS2-212ENST00000542001 CLDN7O95471 211 aa15.94■□□□□ 0.14
VARS2-212ENST00000542001 ALOX15P16050 662 aaPredicted RBP15.94■□□□□ 0.14
VARS2-212ENST00000542001 HOXB8P17481 243 aaPredicted RBP15.94■□□□□ 0.14
VARS2-212ENST00000542001 WASP42768 502 aa15.94■□□□□ 0.14
VARS2-212ENST00000542001 TNK2Q07912 1038 aa15.94■□□□□ 0.14
VARS2-212ENST00000542001 GK3PQ14409 553 aa15.94■□□□□ 0.14
VARS2-212ENST00000542001 C18orf21Q32NC0 220 aaPredicted RBP15.94■□□□□ 0.14
VARS2-212ENST00000542001 PLA2G4EQ3MJ16 856 aa15.94■□□□□ 0.14
VARS2-212ENST00000542001 ZNF467Q7Z7K2 595 aaPredicted RBP15.94■□□□□ 0.14
VARS2-212ENST00000542001 ZNF558Q96NG5 402 aa15.94■□□□□ 0.14
VARS2-212ENST00000542001 TMEM165Q9HC07 324 aa15.94■□□□□ 0.14
VARS2-212ENST00000542001 SAMHD1Q9Y3Z3 626 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms