RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 ZFYVE27Q5T4F4 411 aa9.27□□□□□ -0.93
YBX3-211ENST00000541351 TMEM198Q66K66 360 aa9.27□□□□□ -0.93
YBX3-211ENST00000541351 FAM198BQ6UWH4 519 aa9.27□□□□□ -0.93
YBX3-211ENST00000541351 USP45Q70EL2 814 aa9.27□□□□□ -0.93
YBX3-211ENST00000541351 ENOSF1Q7L5Y1 443 aa9.27□□□□□ -0.93
YBX3-211ENST00000541351 FAM131BQ86XD5 332 aa9.27□□□□□ -0.93
YBX3-211ENST00000541351 AOPEPQ8N6M6 819 aa9.27□□□□□ -0.93
YBX3-211ENST00000541351 LINC00301Q8NCQ3 95 aa9.27□□□□□ -0.93
YBX3-211ENST00000541351 MSANTD4Q8NCY6 345 aa9.27□□□□□ -0.93
YBX3-211ENST00000541351 PTCD2Q8WV60 388 aaKnown RBP9.27□□□□□ -0.93
YBX3-211ENST00000541351 RSC1A1Q92681 617 aa9.27□□□□□ -0.93
YBX3-211ENST00000541351 CXorf40BQ96DE9 158 aa9.27□□□□□ -0.93
YBX3-211ENST00000541351 ARSGQ96EG1 525 aa9.27□□□□□ -0.93
YBX3-211ENST00000541351 ZNF396Q96N95 335 aaPredicted RBP9.27□□□□□ -0.93
YBX3-211ENST00000541351 LMF1Q96S06 567 aa9.27□□□□□ -0.93
YBX3-211ENST00000541351 TRIM56Q9BRZ2 755 aaKnown RBP9.27□□□□□ -0.93
YBX3-211ENST00000541351 OSGEPL1Q9H4B0 414 aa9.27□□□□□ -0.93
YBX3-211ENST00000541351 ZBTB20Q9HC78 741 aaPredicted RBP9.27□□□□□ -0.93
YBX3-211ENST00000541351 SEPT11Q9NVA2 429 aaKnown RBP9.27□□□□□ -0.93
YBX3-211ENST00000541351 SOHLH2Q9NX45 425 aa9.27□□□□□ -0.93
YBX3-211ENST00000541351 ABI3Q9P2A4 366 aa9.27□□□□□ -0.93
YBX3-211ENST00000541351 CNTN6Q9UQ52 1028 aa9.27□□□□□ -0.93
YBX3-211ENST00000541351 BTRCQ9Y297 605 aa9.27□□□□□ -0.93
YBX3-211ENST00000541351 CNTRLQ7Z7A1 2325 aa9.27□□□□□ -0.93
YBX3-211ENST00000541351 FLNAP21333 2647 aaKnown RBP9.26□□□□□ -0.93
YBX3-211ENST00000541351 ATRQ13535 2644 aa9.26□□□□□ -0.93
YBX3-211ENST00000541351 CACNA1CQ13936 2221 aa9.26□□□□□ -0.93
YBX3-211ENST00000541351 IGHV5-51A0A0C4DH38 117 aa9.26□□□□□ -0.93
YBX3-211ENST00000541351 PDZK1P1A8MUH7 402 aa9.26□□□□□ -0.93
YBX3-211ENST00000541351 IDSB3KWA1 339 aa9.26□□□□□ -0.93
YBX3-211ENST00000541351 GPR89AB7ZAQ6 455 aa9.26□□□□□ -0.93
YBX3-211ENST00000541351 I6L893 689 aaPredicted RBP9.26□□□□□ -0.93
YBX3-211ENST00000541351 AGPSO00116 658 aa9.26□□□□□ -0.93
YBX3-211ENST00000541351 VEGFDO43915 354 aa9.26□□□□□ -0.93
YBX3-211ENST00000541351 SOCS5O75159 536 aa9.26□□□□□ -0.93
YBX3-211ENST00000541351 PALMO75781 387 aa9.26□□□□□ -0.93
YBX3-211ENST00000541351 GPR89BP0CG08 455 aa9.26□□□□□ -0.93
YBX3-211ENST00000541351 IDSP22304 550 aa9.26□□□□□ -0.93
YBX3-211ENST00000541351 RORAP35398 523 aa9.26□□□□□ -0.93
YBX3-211ENST00000541351 FMO5P49326 533 aa9.26□□□□□ -0.93
YBX3-211ENST00000541351 RENBPP51606 427 aa9.26□□□□□ -0.93
YBX3-211ENST00000541351 DGKQP52824 942 aa9.26□□□□□ -0.93
YBX3-211ENST00000541351 ADAM8P78325 824 aa9.26□□□□□ -0.93
YBX3-211ENST00000541351 ARG2P78540 354 aa9.26□□□□□ -0.93
YBX3-211ENST00000541351 NSUN2Q08J23 767 aaKnown RBP eCLIP9.26□□□□□ -0.93
YBX3-211ENST00000541351 KCNAB1Q14722 419 aa9.26□□□□□ -0.93
YBX3-211ENST00000541351 RABEP1Q15276 862 aa9.26□□□□□ -0.93
YBX3-211ENST00000541351 CYTH1Q15438 398 aa9.26□□□□□ -0.93
YBX3-211ENST00000541351 SEPT7Q16181 437 aaKnown RBP9.26□□□□□ -0.93
YBX3-211ENST00000541351 OTUD1Q5VV17 481 aaPredicted RBP9.26□□□□□ -0.93
YBX3-211ENST00000541351 PRAMEF13Q5VWM6 474 aa9.26□□□□□ -0.93
YBX3-211ENST00000541351 ISLR2Q6UXK2 745 aa9.26□□□□□ -0.93
YBX3-211ENST00000541351 TRIM72Q6ZMU5 477 aa9.26□□□□□ -0.93
YBX3-211ENST00000541351 Q6ZVL8 140 aa9.26□□□□□ -0.93
YBX3-211ENST00000541351 RRAGAQ7L523 313 aa9.26□□□□□ -0.93
YBX3-211ENST00000541351 ZSWIM9Q86XI8 627 aa9.26□□□□□ -0.93
YBX3-211ENST00000541351 RAVER1Q8IY67 606 aaKnown RBP9.26□□□□□ -0.93
YBX3-211ENST00000541351 OR1N1Q8NGS0 311 aa9.26□□□□□ -0.93
YBX3-211ENST00000541351 SUN3Q8TAQ9 357 aa9.26□□□□□ -0.93
YBX3-211ENST00000541351 PTERQ96BW5 349 aa9.26□□□□□ -0.93
YBX3-211ENST00000541351 ZNF501Q96CX3 271 aaPredicted RBP9.26□□□□□ -0.93
YBX3-211ENST00000541351 CINPQ9BW66 212 aaPredicted RBP9.26□□□□□ -0.93
YBX3-211ENST00000541351 GTPBP4Q9BZE4 634 aaKnown RBP9.26□□□□□ -0.93
YBX3-211ENST00000541351 LHPPQ9H008 270 aa9.26□□□□□ -0.93
YBX3-211ENST00000541351 CATSPERBQ9H7T0 1116 aa9.26□□□□□ -0.93
YBX3-211ENST00000541351 NDFIP2Q9NV92 336 aa9.26□□□□□ -0.93
YBX3-211ENST00000541351 NDOR1Q9UHB4 597 aa9.26□□□□□ -0.93
YBX3-211ENST00000541351 ST6GALNAC2Q9UJ37 374 aa9.26□□□□□ -0.93
YBX3-211ENST00000541351 SERTAD3Q9UJW9 196 aa9.26□□□□□ -0.93
YBX3-211ENST00000541351 DNPEPQ9ULA0 475 aa9.26□□□□□ -0.93
YBX3-211ENST00000541351 PTRH2Q9Y3E5 179 aaKnown RBP9.26□□□□□ -0.93
YBX3-211ENST00000541351 CSAG2Q9Y5P2 127 aa9.26□□□□□ -0.93
YBX3-211ENST00000541351 HTRA2O43464 458 aaPredicted RBP9.25□□□□□ -0.93
YBX3-211ENST00000541351 DNAJC6O75061 913 aa9.25□□□□□ -0.93
YBX3-211ENST00000541351 LRIG2O94898 1065 aa9.25□□□□□ -0.93
YBX3-211ENST00000541351 YEATS4O95619 227 aa9.25□□□□□ -0.93
YBX3-211ENST00000541351 CALCAP01258 141 aa9.25□□□□□ -0.93
YBX3-211ENST00000541351 ZNF30P17039 623 aa9.25□□□□□ -0.93
YBX3-211ENST00000541351 VCLP18206 1134 aa9.25□□□□□ -0.93
YBX3-211ENST00000541351 KRT9P35527 623 aa9.25□□□□□ -0.93
YBX3-211ENST00000541351 HALP42357 657 aa9.25□□□□□ -0.93
YBX3-211ENST00000541351 FKBP3Q00688 224 aaKnown RBP9.25□□□□□ -0.93
YBX3-211ENST00000541351 DMPKQ09013 629 aa9.25□□□□□ -0.93
YBX3-211ENST00000541351 MYBPHQ13203 477 aa9.25□□□□□ -0.93
YBX3-211ENST00000541351 RFTN1Q14699 578 aaPredicted RBP9.25□□□□□ -0.93
YBX3-211ENST00000541351 FAM102AQ5T9C2 384 aaPredicted RBP9.25□□□□□ -0.93
YBX3-211ENST00000541351 MANEALQ5VSG8 457 aa9.25□□□□□ -0.93
YBX3-211ENST00000541351 SMYD5Q6GMV2 418 aa9.25□□□□□ -0.93
YBX3-211ENST00000541351 ARMC6Q6NXE6 501 aa9.25□□□□□ -0.93
YBX3-211ENST00000541351 SPOCD1Q6ZMY3 1216 aa9.25□□□□□ -0.93
YBX3-211ENST00000541351 RTL3Q8N8U3 475 aaKnown RBP9.25□□□□□ -0.93
YBX3-211ENST00000541351 SLC38A9Q8NBW4 561 aa9.25□□□□□ -0.93
YBX3-211ENST00000541351 ACRBPQ8NEB7 543 aa9.25□□□□□ -0.93
YBX3-211ENST00000541351 OR2Y1Q8NGV0 311 aa9.25□□□□□ -0.93
YBX3-211ENST00000541351 PHF10Q8WUB8 498 aaKnown RBP9.25□□□□□ -0.93
YBX3-211ENST00000541351 SLC35C1Q96A29 364 aa9.25□□□□□ -0.93
YBX3-211ENST00000541351 RMND5BQ96G75 393 aaPredicted RBP9.25□□□□□ -0.93
YBX3-211ENST00000541351 PAGE5Q96GU1 130 aa9.25□□□□□ -0.93
YBX3-211ENST00000541351 SECISBP2Q96T21 854 aaKnown RBP9.25□□□□□ -0.93
YBX3-211ENST00000541351 NDC1Q9BTX1 674 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms