RNA–Protein interactions for RNA: ENST00000541099.5

TRIT1-215, Transcript of tRNA isopentenyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene TRIT1, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIT1-215ENST00000541099 SOX13Q9UN79 622 aa11.54□□□□□ -0.56
TRIT1-215ENST00000541099 KCNK6Q9Y257 313 aa11.54□□□□□ -0.56
TRIT1-215ENST00000541099 SNX24Q9Y343 169 aa11.54□□□□□ -0.56
TRIT1-215ENST00000541099 GOLGA4Q13439 2230 aaKnown RBP11.54□□□□□ -0.56
TRIT1-215ENST00000541099 NEMP2A6NFY4 417 aa11.53□□□□□ -0.56
TRIT1-215ENST00000541099 BHMG1C9JSJ3 638 aaPredicted RBP11.53□□□□□ -0.56
TRIT1-215ENST00000541099 CDK14O94921 469 aa11.53□□□□□ -0.56
TRIT1-215ENST00000541099 SEC31AO94979 1220 aaKnown RBP11.53□□□□□ -0.56
TRIT1-215ENST00000541099 ANXA6P08133 673 aa11.53□□□□□ -0.56
TRIT1-215ENST00000541099 CKMT1AP12532 417 aa11.53□□□□□ -0.56
TRIT1-215ENST00000541099 MLNP12872 115 aa11.53□□□□□ -0.56
TRIT1-215ENST00000541099 ACRV1P26436 265 aa11.53□□□□□ -0.56
TRIT1-215ENST00000541099 ARCN1P48444 511 aaKnown RBP11.53□□□□□ -0.56
TRIT1-215ENST00000541099 ITGA8P53708 1063 aa11.53□□□□□ -0.56
TRIT1-215ENST00000541099 MAZP56270 477 aaKnown RBP11.53□□□□□ -0.56
TRIT1-215ENST00000541099 ITGA9Q13797 1035 aa11.53□□□□□ -0.56
TRIT1-215ENST00000541099 DHX34Q14147 1143 aaKnown RBP11.53□□□□□ -0.56
TRIT1-215ENST00000541099 SKIDA1Q1XH10 827 aa11.53□□□□□ -0.56
TRIT1-215ENST00000541099 ZNF658BQ4V348 819 aaPredicted RBP11.53□□□□□ -0.56
TRIT1-215ENST00000541099 ZRANB3Q5FWF4 1079 aa11.53□□□□□ -0.56
TRIT1-215ENST00000541099 PERM1Q5SV97 790 aa11.53□□□□□ -0.56
TRIT1-215ENST00000541099 LDLRAP1Q5SW96 308 aa11.53□□□□□ -0.56
TRIT1-215ENST00000541099 DUPD1Q68J44 220 aa11.53□□□□□ -0.56
TRIT1-215ENST00000541099 ZCCHC8Q6NZY4 707 aaKnown RBP11.53□□□□□ -0.56
TRIT1-215ENST00000541099 LVRNQ6Q4G3 990 aa11.53□□□□□ -0.56
TRIT1-215ENST00000541099 TMEM220Q6QAJ8 160 aa11.53□□□□□ -0.56
TRIT1-215ENST00000541099 FAM83HQ6ZRV2 1179 aaPredicted RBP11.53□□□□□ -0.56
TRIT1-215ENST00000541099 SYDE1Q6ZW31 735 aaPredicted RBP11.53□□□□□ -0.56
TRIT1-215ENST00000541099 DET1Q7L5Y6 550 aa11.53□□□□□ -0.56
TRIT1-215ENST00000541099 CHST15Q7LFX5 561 aaPredicted RBP11.53□□□□□ -0.56
TRIT1-215ENST00000541099 SPNS2Q8IVW8 549 aa11.53□□□□□ -0.56
TRIT1-215ENST00000541099 NAGSQ8N159 534 aa11.53□□□□□ -0.56
TRIT1-215ENST00000541099 LILRA3Q8N6C8 439 aaPredicted RBP11.53□□□□□ -0.56
TRIT1-215ENST00000541099 NOA1Q8NC60 698 aaKnown RBP11.53□□□□□ -0.56
TRIT1-215ENST00000541099 FAM46DQ8NEK8 389 aa11.53□□□□□ -0.56
TRIT1-215ENST00000541099 PPHLN1Q8NEY8 458 aaKnown RBP11.53□□□□□ -0.56
TRIT1-215ENST00000541099 LRRC45Q96CN5 670 aa11.53□□□□□ -0.56
TRIT1-215ENST00000541099 SGF29Q96ES7 293 aa11.53□□□□□ -0.56
TRIT1-215ENST00000541099 RUNDC3BQ96NL0 473 aa11.53□□□□□ -0.56
TRIT1-215ENST00000541099 RMI1Q9H9A7 625 aa11.53□□□□□ -0.56
TRIT1-215ENST00000541099 MRM3Q9HC36 420 aaKnown RBP11.53□□□□□ -0.56
TRIT1-215ENST00000541099 BFARQ9NZS9 450 aa11.53□□□□□ -0.56
TRIT1-215ENST00000541099 SCHIP1Q9P0W5 487 aaPredicted RBP11.53□□□□□ -0.56
TRIT1-215ENST00000541099 TBC1D29Q9UFV1 150 aa11.53□□□□□ -0.56
TRIT1-215ENST00000541099 CRLS1Q9UJA2 301 aa11.53□□□□□ -0.56
TRIT1-215ENST00000541099 GPR34Q9UPC5 381 aa11.53□□□□□ -0.56
TRIT1-215ENST00000541099 ASXL3Q9C0F0 2248 aa11.53□□□□□ -0.56
TRIT1-215ENST00000541099 CACNA1AO00555 2505 aa11.53□□□□□ -0.56
TRIT1-215ENST00000541099 ARHGEF17Q96PE2 2063 aaPredicted RBP11.52□□□□□ -0.57
TRIT1-215ENST00000541099 ZCWPW2A0A1B0GU75 182 aa11.52□□□□□ -0.57
TRIT1-215ENST00000541099 OR2AG2A6NM03 316 aa11.52□□□□□ -0.57
TRIT1-215ENST00000541099 B4DGG1 531 aa11.52□□□□□ -0.57
TRIT1-215ENST00000541099 GOLGA8KD6RF30 607 aa11.52□□□□□ -0.57
TRIT1-215ENST00000541099 GOLGA8TH3BQL2 631 aa11.52□□□□□ -0.57
TRIT1-215ENST00000541099 VEGFDO43915 354 aa11.52□□□□□ -0.57
TRIT1-215ENST00000541099 OR1I1O60431 355 aa11.52□□□□□ -0.57
TRIT1-215ENST00000541099 CKMT2P17540 419 aa11.52□□□□□ -0.57
TRIT1-215ENST00000541099 ITGALP20701 1170 aa11.52□□□□□ -0.57
TRIT1-215ENST00000541099 ACP1P24666 158 aa11.52□□□□□ -0.57
TRIT1-215ENST00000541099 ACTR1BP42025 376 aa11.52□□□□□ -0.57
TRIT1-215ENST00000541099 ACTR1AP61163 376 aa11.52□□□□□ -0.57
TRIT1-215ENST00000541099 CACNG1Q06432 222 aa11.52□□□□□ -0.57
TRIT1-215ENST00000541099 DHX9Q08211 1270 aaKnown RBP11.52□□□□□ -0.57
TRIT1-215ENST00000541099 HLTFQ14527 1009 aaKnown RBP eCLIP11.52□□□□□ -0.57
TRIT1-215ENST00000541099 WHAMMP3Q1A5X7 153 aa11.52□□□□□ -0.57
TRIT1-215ENST00000541099 INAVAQ3KP66 663 aa11.52□□□□□ -0.57
TRIT1-215ENST00000541099 LRRTM4Q86VH4 590 aa11.52□□□□□ -0.57
TRIT1-215ENST00000541099 GKN2Q86XP6 184 aa11.52□□□□□ -0.57
TRIT1-215ENST00000541099 UNC5BQ8IZJ1 945 aa11.52□□□□□ -0.57
TRIT1-215ENST00000541099 LRRN4CLQ8ND94 238 aa11.52□□□□□ -0.57
TRIT1-215ENST00000541099 GDAP1Q8TB36 358 aa11.52□□□□□ -0.57
TRIT1-215ENST00000541099 PEX13Q92968 403 aa11.52□□□□□ -0.57
TRIT1-215ENST00000541099 SGSM3Q96HU1 749 aa11.52□□□□□ -0.57
TRIT1-215ENST00000541099 DUSP23Q9BVJ7 150 aa11.52□□□□□ -0.57
TRIT1-215ENST00000541099 GSDMCQ9BYG8 508 aa11.52□□□□□ -0.57
TRIT1-215ENST00000541099 DPH5Q9H2P9 285 aa11.52□□□□□ -0.57
TRIT1-215ENST00000541099 PRDM8Q9NQV8 689 aa11.52□□□□□ -0.57
TRIT1-215ENST00000541099 ZDHHC3Q9NYG2 299 aa11.52□□□□□ -0.57
TRIT1-215ENST00000541099 GRHL1Q9NZI5 618 aa11.52□□□□□ -0.57
TRIT1-215ENST00000541099 WDR37Q9Y2I8 494 aa11.52□□□□□ -0.57
TRIT1-215ENST00000541099 SLC30A1Q9Y6M5 507 aa11.52□□□□□ -0.57
TRIT1-215ENST00000541099 NCOR2Q9Y618 2525 aa11.51□□□□□ -0.57
TRIT1-215ENST00000541099 TRBV23OR9-2A0A075B6M9 112 aa11.51□□□□□ -0.57
TRIT1-215ENST00000541099 PRAMEF33A0A0G2JMD5 474 aa11.51□□□□□ -0.57
TRIT1-215ENST00000541099 EME2A4GXA9 379 aaPredicted RBP11.51□□□□□ -0.57
TRIT1-215ENST00000541099 FAM187AA6NFU0 413 aa11.51□□□□□ -0.57
TRIT1-215ENST00000541099 SDR42E2A6NKP2 422 aa11.51□□□□□ -0.57
TRIT1-215ENST00000541099 EFCAB8A8MWE9 144 aa11.51□□□□□ -0.57
TRIT1-215ENST00000541099 GPR89AB7ZAQ6 455 aa11.51□□□□□ -0.57
TRIT1-215ENST00000541099 POP7O75817 140 aaKnown RBP11.51□□□□□ -0.57
TRIT1-215ENST00000541099 GPR89BP0CG08 455 aa11.51□□□□□ -0.57
TRIT1-215ENST00000541099 ALPPL2P10696 532 aa11.51□□□□□ -0.57
TRIT1-215ENST00000541099 BRAFP15056 766 aa11.51□□□□□ -0.57
TRIT1-215ENST00000541099 ZNF7P17097 686 aaPredicted RBP11.51□□□□□ -0.57
TRIT1-215ENST00000541099 SPINK2P20155 84 aa11.51□□□□□ -0.57
TRIT1-215ENST00000541099 MSH3P20585 1137 aa11.51□□□□□ -0.57
TRIT1-215ENST00000541099 PMLP29590 882 aa11.51□□□□□ -0.57
TRIT1-215ENST00000541099 CLCNKAP51800 687 aa11.51□□□□□ -0.57
TRIT1-215ENST00000541099 SLC7A5Q01650 507 aa11.51□□□□□ -0.57
TRIT1-215ENST00000541099 ILF3Q12906 894 aaKnown RBP eCLIP11.51□□□□□ -0.571e-8■■■□□ 16.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms