RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	CNOT11	Q9UKZ1	510 aa	Known RBP	5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	OAZ3	Q9UMX2	235 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	TSC22D4	Q9Y3Q8	395 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	ST14	Q9Y5Y6	855 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	DGKB	Q9Y6T7	804 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	DOCK5	Q9H7D0	1870 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783		A8MU76	341 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	GSTT2	P0CG29	244 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	GSTT2B	P0CG30	244 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	CES1	P23141	567 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	AFF1	P51825	1210 aa	Known RBP	5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	YBEY	P58557	167 aa	Predicted RBP	5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	MERTK	Q12866	999 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	GPNMB	Q14956	572 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	TSTD2	Q5T7W7	516 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	ANKRD26P1	Q6NSI1	321 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	ZC3H14	Q6PJT7	736 aa	Known RBP	5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	SERPINA13P	Q6UXR4	307 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	CEP68	Q76N32	757 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	C11orf74	Q86VG3	221 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	CENPL	Q8N0S6	344 aa	Predicted RBP	5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	CXorf38	Q8TB03	319 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	MAGEE2	Q8TD90	523 aa	Predicted RBP	5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	TCF12	Q99081	682 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	SMO	Q99835	787 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	RTP3	Q9BQQ7	232 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	EFHD1	Q9BUP0	239 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	TTLL2	Q9BWV7	592 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	ZYG11B	Q9C0D3	744 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	POMK	Q9H5K3	350 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	SPAG4	Q9NPE6	437 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	PCDH12	Q9NPG4	1184 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	CROT	Q9UKG9	612 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	TLR6	Q9Y2C9	796 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	PTGDR2	Q9Y5Y4	395 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783		A0A1B0GVM2	712 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783		A0A1W2PQ67	120 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	ZNF840P	A6NDX5	716 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	EI24	O14681	340 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	TBL1X	O60907	577 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	ECI2	O75521	394 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	IGSF6	O95976	241 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	AHSG	P02765	367 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	SLC35E2B	P0CK96	405 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	MTHFD1	P11586	935 aa	Known RBP	5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	ADH5	P11766	374 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	GLUL	P15104	373 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	NCK1	P16333	377 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	OXTR	P30559	389 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	MAGEA12	P43365	314 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	NR2C2	P49116	596 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	DGKG	P49619	791 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	PIGF	Q07326	219 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	STX5	Q13190	355 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	CBLB	Q13191	982 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	EIF4H	Q15056	248 aa	Known RBP	5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	CARTPT	Q16568	116 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	TXNDC8	Q6A555	127 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	PPP4R4	Q6NUP7	873 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	PIWIL3	Q7Z3Z3	882 aa	Known RBP	5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	TXNDC5	Q8NBS9	432 aa	Known RBP	5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	CINP	Q9BW66	212 aa	Predicted RBP	5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	C1QTNF1	Q9BXJ1	281 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	TKTL2	Q9H0I9	626 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	OSBPL2	Q9H1P3	480 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	ATP13A1	Q9HD20	1204 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	ZDHHC4	Q9NPG8	344 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	HCST	Q9UBK5	93 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	SUCO	Q9UBS9	1254 aa	Known RBP	5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	LIMD1	Q9UGP4	676 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	VPS51	Q9UID3	782 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	NME7	Q9Y5B8	376 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	SNX10	Q9Y5X0	201 aa		5.63	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	TCRBV3S1	A0A5B6	114 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	FAM72C	H0Y354	149 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	NR5A2	O00482	541 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	TOR1B	O14657	336 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	TRIM24	O15164	1050 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	NDUFS2	O75306	463 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	SRP72	O76094	671 aa	Known RBP	5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	SNRPB2	P08579	225 aa	Known RBP	5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	POU3F3	P20264	500 aa	Predicted RBP	5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	ELK4	P28324	431 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	OR1E1	P30953	314 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	CSHL1	Q14406	222 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	RFTN1	Q14699	578 aa	Predicted RBP	5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	POU6F1	Q14863	301 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	HERC3	Q15034	1050 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	VPS26B	Q4G0F5	336 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	CCDC92	Q53HC0	331 aa	Predicted RBP	5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	OTUD3	Q5T2D3	398 aa	Predicted RBP	5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	ADGRF1	Q5T601	910 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	FAM72A	Q5TYM5	149 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	FAM72D	Q6L9T8	149 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	TPGS1	Q6ZTW0	290 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	RETREG3	Q86VR2	466 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	FAM72B	Q86X60	149 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	MFSD6L	Q8IWD5	586 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	ADHFE1	Q8IWW8	467 aa		5.62	□□□□□ -1.51
RAPGEF4-215	ENST00000540783	CHPF	Q8IZ52	775 aa		5.62	□□□□□ -1.51

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