RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 MYO16Q9Y6X6 1858 aa13.98□□□□□ -0.17
INO80E-203ENST00000540562 SLC22A2O15244 555 aa13.98□□□□□ -0.17
INO80E-203ENST00000540562 SLC22A3O75751 556 aa13.98□□□□□ -0.17
INO80E-203ENST00000540562 TMCC1O94876 653 aa13.98□□□□□ -0.17
INO80E-203ENST00000540562 GSSP48637 474 aa13.98□□□□□ -0.17
INO80E-203ENST00000540562 HSPA13P48723 471 aa13.98□□□□□ -0.17
INO80E-203ENST00000540562 RPL38P63173 70 aaKnown RBP13.98□□□□□ -0.17
INO80E-203ENST00000540562 GNA12Q03113 381 aa13.98□□□□□ -0.17
INO80E-203ENST00000540562 MGAT3Q09327 533 aa13.98□□□□□ -0.17
INO80E-203ENST00000540562 FGD3Q5JSP0 725 aa13.98□□□□□ -0.17
INO80E-203ENST00000540562 GPSM1Q86YR5 675 aa13.98□□□□□ -0.17
INO80E-203ENST00000540562 PHYKPLQ8IUZ5 450 aa13.98□□□□□ -0.17
INO80E-203ENST00000540562 ZNF683Q8IZ20 524 aa13.98□□□□□ -0.17
INO80E-203ENST00000540562 ADGRG5Q8IZF4 528 aa13.98□□□□□ -0.17
INO80E-203ENST00000540562 CARNMT1Q8N4J0 409 aa13.98□□□□□ -0.17
INO80E-203ENST00000540562 TET1Q8NFU7 2136 aa13.98□□□□□ -0.17
INO80E-203ENST00000540562 C12orf43Q96C57 262 aaKnown RBP13.98□□□□□ -0.17
INO80E-203ENST00000540562 C17orf80Q9BSJ5 609 aa13.98□□□□□ -0.17
INO80E-203ENST00000540562 SMURF2Q9HAU4 748 aa13.98□□□□□ -0.17
INO80E-203ENST00000540562 UBA2Q9UBT2 640 aaPredicted RBP13.98□□□□□ -0.17
INO80E-203ENST00000540562 SCML2Q9UQR0 700 aa13.98□□□□□ -0.17
INO80E-203ENST00000540562 A0A0C4DFX4 3053 aa13.98□□□□□ -0.17
INO80E-203ENST00000540562 LOC285095A0A1B0GVY8 99 aa13.98□□□□□ -0.17
INO80E-203ENST00000540562 J3QRK9 145 aa13.98□□□□□ -0.17
INO80E-203ENST00000540562 POLR2JP52435 117 aaKnown RBP13.98□□□□□ -0.17
INO80E-203ENST00000540562 OXCT1P55809 520 aa13.98□□□□□ -0.17
INO80E-203ENST00000540562 FAM126BQ8IXS8 530 aa13.98□□□□□ -0.17
INO80E-203ENST00000540562 FAM81AQ8TBF8 368 aa13.98□□□□□ -0.17
INO80E-203ENST00000540562 LINC01599Q8WXQ3 324 aa13.98□□□□□ -0.17
INO80E-203ENST00000540562 TFAP2CQ92754 450 aa13.98□□□□□ -0.17
INO80E-203ENST00000540562 NCLNQ969V3 563 aa13.98□□□□□ -0.17
INO80E-203ENST00000540562 FBXL8Q96CD0 374 aa13.98□□□□□ -0.17
INO80E-203ENST00000540562 L3HYPDHQ96EM0 354 aa13.98□□□□□ -0.17
INO80E-203ENST00000540562 CHID1Q9BWS9 393 aa13.98□□□□□ -0.17
INO80E-203ENST00000540562 DGCR6LQ9BY27 220 aa13.98□□□□□ -0.17
INO80E-203ENST00000540562 CCDC90BQ9GZT6 254 aa13.98□□□□□ -0.17
INO80E-203ENST00000540562 FBXO44Q9H4M3 255 aa13.98□□□□□ -0.17
INO80E-203ENST00000540562 ARNT2Q9HBZ2 717 aa13.98□□□□□ -0.17
INO80E-203ENST00000540562 MRM3Q9HC36 420 aaKnown RBP13.98□□□□□ -0.17
INO80E-203ENST00000540562 TLR8Q9NR97 1041 aaKnown RBP13.98□□□□□ -0.17
INO80E-203ENST00000540562 RAI2Q9Y5P3 530 aa13.98□□□□□ -0.17
INO80E-203ENST00000540562 OAS3Q9Y6K5 1087 aaKnown RBP13.98□□□□□ -0.17
INO80E-203ENST00000540562 SQORQ9Y6N5 450 aa13.98□□□□□ -0.17
INO80E-203ENST00000540562 TDRD15B5MCY1 1934 aaKnown RBP13.98□□□□□ -0.17
INO80E-203ENST00000540562 INSIG1O15503 277 aa13.97□□□□□ -0.17
INO80E-203ENST00000540562 AP1G1O43747 822 aa13.97□□□□□ -0.17
INO80E-203ENST00000540562 LRATO95237 230 aa13.97□□□□□ -0.17
INO80E-203ENST00000540562 ATE1O95260 518 aa13.97□□□□□ -0.17
INO80E-203ENST00000540562 SLC2A4P14672 509 aa13.97□□□□□ -0.17
INO80E-203ENST00000540562 TCF3P15923 654 aa13.97□□□□□ -0.17
INO80E-203ENST00000540562 ZNF135P52742 658 aaPredicted RBP13.97□□□□□ -0.17
INO80E-203ENST00000540562 ADARP55265 1226 aaKnown RBP13.97□□□□□ -0.17
INO80E-203ENST00000540562 ERVPABLB-1P60509 514 aa13.97□□□□□ -0.17
INO80E-203ENST00000540562 BNIP3Q12983 259 aa13.97□□□□□ -0.17
INO80E-203ENST00000540562 ATP6AP1LQ52LC2 224 aa13.97□□□□□ -0.17
INO80E-203ENST00000540562 RFTN2Q52LD8 501 aaPredicted RBP13.97□□□□□ -0.17
INO80E-203ENST00000540562 RNF219Q5W0B1 726 aaPredicted RBP13.97□□□□□ -0.17
INO80E-203ENST00000540562 CCM2LQ9NUG4 571 aaPredicted RBP13.97□□□□□ -0.17
INO80E-203ENST00000540562 PTGES3LE9PB15 166 aa13.97□□□□□ -0.17
INO80E-203ENST00000540562 ARVCFO00192 962 aa13.97□□□□□ -0.17
INO80E-203ENST00000540562 C1QCP02747 245 aa13.97□□□□□ -0.17
INO80E-203ENST00000540562 VARSP26640 1264 aaKnown RBP13.97□□□□□ -0.17
INO80E-203ENST00000540562 HOXD9P28356 352 aaPredicted RBP13.97□□□□□ -0.17
INO80E-203ENST00000540562 TAF12Q16514 161 aa13.97□□□□□ -0.17
INO80E-203ENST00000540562 KANK2Q63ZY3 851 aa13.97□□□□□ -0.17
INO80E-203ENST00000540562 BLOC1S3Q6QNY0 202 aa13.97□□□□□ -0.17
INO80E-203ENST00000540562 ITIH5Q86UX2 942 aa13.97□□□□□ -0.17
INO80E-203ENST00000540562 KRTCAP2Q8N6L1 136 aa13.97□□□□□ -0.17
INO80E-203ENST00000540562 GAB3Q8WWW8 586 aa13.97□□□□□ -0.17
INO80E-203ENST00000540562 TMEM125Q96AQ2 219 aa13.97□□□□□ -0.17
INO80E-203ENST00000540562 MUS81Q96NY9 551 aa13.97□□□□□ -0.17
INO80E-203ENST00000540562 TRIM62Q9BVG3 475 aa13.97□□□□□ -0.17
INO80E-203ENST00000540562 ING2Q9H160 280 aa13.97□□□□□ -0.17
INO80E-203ENST00000540562 AGO1Q9UL18 857 aaKnown RBP13.97□□□□□ -0.17
INO80E-203ENST00000540562 DGKBQ9Y6T7 804 aa13.97□□□□□ -0.17
INO80E-203ENST00000540562 PRAMEF11O60813 436 aa13.96□□□□□ -0.17
INO80E-203ENST00000540562 CHEK2O96017 543 aa13.96□□□□□ -0.17
INO80E-203ENST00000540562 KLKB1P03952 638 aa13.96□□□□□ -0.17
INO80E-203ENST00000540562 FGF1P05230 155 aa13.96□□□□□ -0.17
INO80E-203ENST00000540562 RHOCP08134 193 aa13.96□□□□□ -0.17
INO80E-203ENST00000540562 MZF1P28698 734 aaPredicted RBP13.96□□□□□ -0.17
INO80E-203ENST00000540562 LSM3P62310 102 aaKnown RBP13.96□□□□□ -0.17
INO80E-203ENST00000540562 ESRRGP62508 458 aa13.96□□□□□ -0.17
INO80E-203ENST00000540562 ZNF33AQ06730 810 aa13.96□□□□□ -0.17
INO80E-203ENST00000540562 IL10RBQ08334 325 aa13.96□□□□□ -0.17
INO80E-203ENST00000540562 GLYATQ6IB77 296 aa13.96□□□□□ -0.17
INO80E-203ENST00000540562 GPRIN3Q6ZVF9 776 aa13.96□□□□□ -0.17
INO80E-203ENST00000540562 MRPL10Q7Z7H8 261 aaKnown RBP13.96□□□□□ -0.17
INO80E-203ENST00000540562 CAMK1DQ8IU85 385 aa13.96□□□□□ -0.17
INO80E-203ENST00000540562 RNF175Q8N4F7 328 aa13.96□□□□□ -0.17
INO80E-203ENST00000540562 OR10A6Q8NH74 314 aa13.96□□□□□ -0.17
INO80E-203ENST00000540562 BIRC7Q96CA5 298 aa13.96□□□□□ -0.17
INO80E-203ENST00000540562 GPR63Q9BZJ6 419 aa13.96□□□□□ -0.17
INO80E-203ENST00000540562 PAIP1Q9H074 479 aaKnown RBP13.96□□□□□ -0.17
INO80E-203ENST00000540562 LATS2Q9NRM7 1088 aa13.96□□□□□ -0.17
INO80E-203ENST00000540562 GID8Q9NWU2 228 aa13.96□□□□□ -0.17
INO80E-203ENST00000540562 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.96□□□□□ -0.17
INO80E-203ENST00000540562 PCDHB8Q9UN66 801 aa13.96□□□□□ -0.17
INO80E-203ENST00000540562 GPR45Q9Y5Y3 372 aa13.96□□□□□ -0.17
INO80E-203ENST00000540562 GREB1Q4ZG55 1949 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms