RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 MUS81Q96NY9 551 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 LPIN3Q9BQK8 851 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 SEZ6LQ9BYH1 1024 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 H2AFY2Q9P0M6 372 aaPredicted RBP12.91□□□□□ -0.34
DNMT1-203ENST00000540357 TCAF2A6NFQ2 919 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 HNRNPCL2B2RXH8 293 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 M0QX08 132 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 IRF6O14896 467 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 SNAP29O95721 258 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 NTRK1P04629 796 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 ITGB6P18564 788 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 LPOP22079 712 aaPredicted RBP12.91□□□□□ -0.34
DNMT1-203ENST00000540357 MTPNP58546 118 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 GALNT3Q14435 633 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 QPRTQ15274 297 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 NPTX1Q15818 432 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 ZCCHC8Q6NZY4 707 aaKnown RBP12.91□□□□□ -0.34
DNMT1-203ENST00000540357 CYP2U1Q7Z449 544 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 TAC4Q86UU9 113 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 MFSD2AQ8NA29 543 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 SLC13A3Q8WWT9 602 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 STON2Q8WXE9 905 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 MAGEB10Q96LZ2 347 aaPredicted RBP12.91□□□□□ -0.34
DNMT1-203ENST00000540357 KLHL5Q96PQ7 755 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 SLC29A1Q99808 456 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 KLHL20Q9Y2M5 609 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 IPPQ9Y573 584 aa12.91□□□□□ -0.34
DNMT1-203ENST00000540357 LOC100130705A0A1B0GUX0 176 aa12.9□□□□□ -0.34
DNMT1-203ENST00000540357 PRR23AA6NEV1 266 aa12.9□□□□□ -0.34
DNMT1-203ENST00000540357 E9PAM4 449 aa12.9□□□□□ -0.34
DNMT1-203ENST00000540357 GOT2P00505 430 aaKnown RBP12.9□□□□□ -0.34
DNMT1-203ENST00000540357 ANXA5P08758 320 aa12.9□□□□□ -0.34
DNMT1-203ENST00000540357 PKMP14618 531 aaKnown RBP12.9□□□□□ -0.34
DNMT1-203ENST00000540357 C4BPBP20851 252 aa12.9□□□□□ -0.34
DNMT1-203ENST00000540357 RPL9P32969 192 aaKnown RBP12.9□□□□□ -0.34
DNMT1-203ENST00000540357 RFC2P35250 354 aa12.9□□□□□ -0.34
DNMT1-203ENST00000540357 OR1G1P47890 313 aa12.9□□□□□ -0.34
DNMT1-203ENST00000540357 GABARAPL2P60520 117 aa12.9□□□□□ -0.34
DNMT1-203ENST00000540357 GK3PQ14409 553 aa12.9□□□□□ -0.34
DNMT1-203ENST00000540357 TECRLQ5HYJ1 363 aa12.9□□□□□ -0.34
DNMT1-203ENST00000540357 RNF219Q5W0B1 726 aaPredicted RBP12.9□□□□□ -0.34
DNMT1-203ENST00000540357 DCDC5Q6ZRR9 648 aa12.9□□□□□ -0.34
DNMT1-203ENST00000540357 METTL25Q8N6Q8 603 aa12.9□□□□□ -0.34
DNMT1-203ENST00000540357 TTC29Q8NA56 475 aaPredicted RBP12.9□□□□□ -0.34
DNMT1-203ENST00000540357 MYRFLQ96LU7 910 aa12.9□□□□□ -0.34
DNMT1-203ENST00000540357 MINDY3Q9H8M7 445 aa12.9□□□□□ -0.34
DNMT1-203ENST00000540357 ATP13A1Q9HD20 1204 aa12.9□□□□□ -0.34
DNMT1-203ENST00000540357 TCRBV3S1A0A5B6 114 aa12.9□□□□□ -0.34
DNMT1-203ENST00000540357 YJEFN3A6XGL0 299 aa12.9□□□□□ -0.34
DNMT1-203ENST00000540357 CYP2A7P20853 494 aa12.9□□□□□ -0.34
DNMT1-203ENST00000540357 MAGEA10P43363 369 aaPredicted RBP12.9□□□□□ -0.34
DNMT1-203ENST00000540357 GALNT1Q10472 559 aaPredicted RBP12.9□□□□□ -0.34
DNMT1-203ENST00000540357 RTL3Q8N8U3 475 aaKnown RBP12.9□□□□□ -0.34
DNMT1-203ENST00000540357 KDM1BQ8NB78 822 aa12.9□□□□□ -0.34
DNMT1-203ENST00000540357 HASPINQ8TF76 798 aa12.9□□□□□ -0.34
DNMT1-203ENST00000540357 RANBP9Q96S59 729 aa12.9□□□□□ -0.34
DNMT1-203ENST00000540357 GNG14A0A1W2PPG7 69 aa12.9□□□□□ -0.34
DNMT1-203ENST00000540357 CES1P23141 567 aa12.9□□□□□ -0.34
DNMT1-203ENST00000540357 ELK4P28324 431 aa12.9□□□□□ -0.34
DNMT1-203ENST00000540357 ALDH4A1P30038 563 aa12.9□□□□□ -0.34
DNMT1-203ENST00000540357 MAGEA3P43357 314 aa12.9□□□□□ -0.34
DNMT1-203ENST00000540357 VEPH1Q14D04 833 aa12.9□□□□□ -0.34
DNMT1-203ENST00000540357 PHKG1Q16816 387 aa12.9□□□□□ -0.34
DNMT1-203ENST00000540357 RAB6CQ53S08 254 aa12.9□□□□□ -0.34
DNMT1-203ENST00000540357 AHSA2Q719I0 299 aa12.9□□□□□ -0.34
DNMT1-203ENST00000540357 SLC15A3Q8IY34 581 aa12.9□□□□□ -0.34
DNMT1-203ENST00000540357 GRPEL2Q8TAA5 225 aa12.9□□□□□ -0.34
DNMT1-203ENST00000540357 ARNTL2Q8WYA1 636 aa12.9□□□□□ -0.34
DNMT1-203ENST00000540357 MTFMTQ96DP5 389 aaKnown RBP12.9□□□□□ -0.34
DNMT1-203ENST00000540357 CGREF1Q99674 301 aa12.9□□□□□ -0.34
DNMT1-203ENST00000540357 FEM1AQ9BSK4 669 aa12.9□□□□□ -0.34
DNMT1-203ENST00000540357 RAB6CQ9H0N0 254 aa12.9□□□□□ -0.34
DNMT1-203ENST00000540357 OSBPL2Q9H1P3 480 aa12.9□□□□□ -0.34
DNMT1-203ENST00000540357 TOR3AQ9H497 397 aa12.9□□□□□ -0.34
DNMT1-203ENST00000540357 RASSF1Q9NS23 344 aa12.9□□□□□ -0.34
DNMT1-203ENST00000540357 TMEM181Q9P2C4 612 aa12.9□□□□□ -0.34
DNMT1-203ENST00000540357 ERGIC3Q9Y282 383 aa12.9□□□□□ -0.34
DNMT1-203ENST00000540357 PCDHB5Q9Y5E4 795 aa12.9□□□□□ -0.34
DNMT1-203ENST00000540357 CNTNAP1P78357 1384 aa12.9□□□□□ -0.35
DNMT1-203ENST00000540357 ZCWPW2A0A1B0GU75 182 aa12.9□□□□□ -0.35
DNMT1-203ENST00000540357 RPLP0P05388 317 aaKnown RBP12.9□□□□□ -0.35
DNMT1-203ENST00000540357 POLR2EP19388 210 aaKnown RBP12.9□□□□□ -0.35
DNMT1-203ENST00000540357 IL4RP24394 825 aa12.9□□□□□ -0.35
DNMT1-203ENST00000540357 GSTM2P28161 218 aa12.9□□□□□ -0.35
DNMT1-203ENST00000540357 HPCAL1P37235 193 aa12.9□□□□□ -0.35
DNMT1-203ENST00000540357 FCHO2Q0JRZ9 810 aa12.9□□□□□ -0.35
DNMT1-203ENST00000540357 CNTN1Q12860 1018 aa12.9□□□□□ -0.35
DNMT1-203ENST00000540357 APOFQ13790 326 aa12.9□□□□□ -0.35
DNMT1-203ENST00000540357 CARTPTQ16568 116 aa12.9□□□□□ -0.35
DNMT1-203ENST00000540357 RBM20Q5T481 1227 aaKnown RBP12.9□□□□□ -0.35
DNMT1-203ENST00000540357 RASSF5Q8WWW0 418 aa12.9□□□□□ -0.35
DNMT1-203ENST00000540357 CENPIQ92674 756 aaPredicted RBP12.9□□□□□ -0.35
DNMT1-203ENST00000540357 KAT6AQ92794 2004 aa12.9□□□□□ -0.35
DNMT1-203ENST00000540357 PHF21AQ96BD5 680 aa12.9□□□□□ -0.35
DNMT1-203ENST00000540357 TMCO6Q96DC7 493 aa12.9□□□□□ -0.35
DNMT1-203ENST00000540357 GAD1Q99259 594 aa12.9□□□□□ -0.35
DNMT1-203ENST00000540357 PARK7Q99497 189 aaKnown RBP12.9□□□□□ -0.35
DNMT1-203ENST00000540357 GPR21Q99679 349 aa12.9□□□□□ -0.35
DNMT1-203ENST00000540357 PRRG3Q9BZD7 231 aa12.9□□□□□ -0.35
DNMT1-203ENST00000540357 SLC39A8Q9C0K1 460 aa12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms