RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 RPF2Q9H7B2 306 aaKnown RBP13.53□□□□□ -0.24
BNIP3-202ENST00000540159 ZNHIT2Q9UHR6 403 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 ABT1Q9ULW3 272 aaKnown RBP13.53□□□□□ -0.24
BNIP3-202ENST00000540159 POLR3HQ9Y535 204 aaPredicted RBP13.53□□□□□ -0.24
BNIP3-202ENST00000540159 PATJQ8NI35 1801 aa13.53□□□□□ -0.24
BNIP3-202ENST00000540159 H3BNH8 94 aa13.52□□□□□ -0.24
BNIP3-202ENST00000540159 RSL1D1O76021 490 aaKnown RBP13.52□□□□□ -0.24
BNIP3-202ENST00000540159 B3GALT4O96024 378 aa13.52□□□□□ -0.24
BNIP3-202ENST00000540159 PIM1P11309 404 aaPredicted RBP13.52□□□□□ -0.24
BNIP3-202ENST00000540159 G6PDP11413 515 aa13.52□□□□□ -0.24
BNIP3-202ENST00000540159 OR1D2P34982 312 aa13.52□□□□□ -0.24
BNIP3-202ENST00000540159 HSPA7P48741 367 aa13.52□□□□□ -0.24
BNIP3-202ENST00000540159 ERVPABLB-1P60509 514 aa13.52□□□□□ -0.24
BNIP3-202ENST00000540159 INPP5AQ14642 412 aa13.52□□□□□ -0.24
BNIP3-202ENST00000540159 LRRC23Q53EV4 343 aaPredicted RBP13.52□□□□□ -0.24
BNIP3-202ENST00000540159 CTSL3PQ5NE16 218 aa13.52□□□□□ -0.24
BNIP3-202ENST00000540159 NANOGP8Q6NSW7 305 aa13.52□□□□□ -0.24
BNIP3-202ENST00000540159 BLOC1S3Q6QNY0 202 aa13.52□□□□□ -0.24
BNIP3-202ENST00000540159 BEND5Q7L4P6 421 aa13.52□□□□□ -0.24
BNIP3-202ENST00000540159 ADGRG5Q8IZF4 528 aa13.52□□□□□ -0.24
BNIP3-202ENST00000540159 SGCDQ92629 289 aa13.52□□□□□ -0.24
BNIP3-202ENST00000540159 UROC1Q96N76 676 aa13.52□□□□□ -0.24
BNIP3-202ENST00000540159 NSUN3Q9H649 340 aaKnown RBP13.52□□□□□ -0.24
BNIP3-202ENST00000540159 NANOGQ9H9S0 305 aa13.52□□□□□ -0.24
BNIP3-202ENST00000540159 SDR39U1Q9NRG7 319 aaPredicted RBP13.52□□□□□ -0.24
BNIP3-202ENST00000540159 RNF186Q9NXI6 227 aa13.52□□□□□ -0.24
BNIP3-202ENST00000540159 PTTG2Q9NZH5 202 aa13.52□□□□□ -0.24
BNIP3-202ENST00000540159 HSFX1Q9UBD0 423 aa13.52□□□□□ -0.24
BNIP3-202ENST00000540159 SUN2Q9UH99 717 aa13.52□□□□□ -0.24
BNIP3-202ENST00000540159 GPR45Q9Y5Y3 372 aa13.52□□□□□ -0.24
BNIP3-202ENST00000540159 OAS3Q9Y6K5 1087 aaKnown RBP13.52□□□□□ -0.24
BNIP3-202ENST00000540159 MANSC4A6NHS7 340 aaPredicted RBP13.52□□□□□ -0.25
BNIP3-202ENST00000540159 UNCXA6NJT0 531 aa13.52□□□□□ -0.25
BNIP3-202ENST00000540159 SLC22A3O75751 556 aa13.52□□□□□ -0.25
BNIP3-202ENST00000540159 CA8P35219 290 aa13.52□□□□□ -0.25
BNIP3-202ENST00000540159 ZNF140P52738 457 aaPredicted RBP13.52□□□□□ -0.25
BNIP3-202ENST00000540159 CTBSQ01459 385 aa13.52□□□□□ -0.25
BNIP3-202ENST00000540159 TRAF2Q12933 501 aa13.52□□□□□ -0.25
BNIP3-202ENST00000540159 SLC22A15Q8IZD6 547 aa13.52□□□□□ -0.25
BNIP3-202ENST00000540159 FAM86B1Q8N7N1 296 aa13.52□□□□□ -0.25
BNIP3-202ENST00000540159 FBXO30Q8TB52 745 aa13.52□□□□□ -0.25
BNIP3-202ENST00000540159 BCL7CQ8WUZ0 217 aaPredicted RBP13.52□□□□□ -0.25
BNIP3-202ENST00000540159 GPATCH1Q9BRR8 931 aaKnown RBP13.52□□□□□ -0.25
BNIP3-202ENST00000540159 CCM2LQ9NUG4 571 aaPredicted RBP13.52□□□□□ -0.25
BNIP3-202ENST00000540159 EXD2Q9NVH0 621 aa13.52□□□□□ -0.25
BNIP3-202ENST00000540159 PCTPQ9UKL6 214 aa13.52□□□□□ -0.25
BNIP3-202ENST00000540159 SARDHQ9UL12 918 aa13.52□□□□□ -0.25
BNIP3-202ENST00000540159 CLOCKO15516 846 aa13.51□□□□□ -0.25
BNIP3-202ENST00000540159 ACSL4O60488 711 aa13.51□□□□□ -0.25
BNIP3-202ENST00000540159 PKMP14618 531 aaKnown RBP13.51□□□□□ -0.25
BNIP3-202ENST00000540159 HTR7P34969 479 aa13.51□□□□□ -0.25
BNIP3-202ENST00000540159 ATP5C1P36542 298 aaKnown RBP13.51□□□□□ -0.25
BNIP3-202ENST00000540159 POLR2JP52435 117 aaKnown RBP13.51□□□□□ -0.25
BNIP3-202ENST00000540159 TRAP1Q12931 704 aaKnown RBP13.51□□□□□ -0.25
BNIP3-202ENST00000540159 TAF12Q16514 161 aa13.51□□□□□ -0.25
BNIP3-202ENST00000540159 GPR107Q5VW38 600 aa13.51□□□□□ -0.25
BNIP3-202ENST00000540159 CAMK1DQ8IU85 385 aa13.51□□□□□ -0.25
BNIP3-202ENST00000540159 FIG4Q92562 907 aa13.51□□□□□ -0.25
BNIP3-202ENST00000540159 TMEM125Q96AQ2 219 aa13.51□□□□□ -0.25
BNIP3-202ENST00000540159 HSPBAP1Q96EW2 488 aa13.51□□□□□ -0.25
BNIP3-202ENST00000540159 EGFL8Q99944 293 aa13.51□□□□□ -0.25
BNIP3-202ENST00000540159 RNF38Q9H0F5 515 aa13.51□□□□□ -0.25
BNIP3-202ENST00000540159 PDFQ9HBH1 243 aa13.51□□□□□ -0.25
BNIP3-202ENST00000540159 SYTL2Q9HCH5 934 aa13.51□□□□□ -0.25
BNIP3-202ENST00000540159 MRPL40Q9NQ50 206 aaKnown RBP13.51□□□□□ -0.25
BNIP3-202ENST00000540159 PNPLA3Q9NST1 481 aa13.51□□□□□ -0.25
BNIP3-202ENST00000540159 SEPT3Q9UH03 358 aa13.51□□□□□ -0.25
BNIP3-202ENST00000540159 RSL24D1Q9UHA3 163 aaKnown RBP13.51□□□□□ -0.25
BNIP3-202ENST00000540159 CIDEBQ9UHD4 219 aa13.51□□□□□ -0.25
BNIP3-202ENST00000540159 U3KQV3 271 aa13.51□□□□□ -0.25
BNIP3-202ENST00000540159 KANSL1LA0AUZ9 987 aa13.51□□□□□ -0.25
BNIP3-202ENST00000540159 UPK3BL1B0FP48 263 aa13.51□□□□□ -0.25
BNIP3-202ENST00000540159 UPK3BL2E5RIL1 263 aa13.51□□□□□ -0.25
BNIP3-202ENST00000540159 VPS26AO75436 327 aa13.51□□□□□ -0.25
BNIP3-202ENST00000540159 TFPTP0C1Z6 253 aa13.51□□□□□ -0.25
BNIP3-202ENST00000540159 CDK4P11802 303 aa13.51□□□□□ -0.25
BNIP3-202ENST00000540159 ELK4P28324 431 aa13.51□□□□□ -0.25
BNIP3-202ENST00000540159 ACADVLP49748 655 aa13.51□□□□□ -0.25
BNIP3-202ENST00000540159 ACLYP53396 1101 aa13.51□□□□□ -0.25
BNIP3-202ENST00000540159 IL2P60568 153 aa13.51□□□□□ -0.25
BNIP3-202ENST00000540159 PIGFQ07326 219 aa13.51□□□□□ -0.25
BNIP3-202ENST00000540159 MERTKQ12866 999 aa13.51□□□□□ -0.25
BNIP3-202ENST00000540159 FOXD4Q12950 439 aaPredicted RBP13.51□□□□□ -0.25
BNIP3-202ENST00000540159 PLD1Q13393 1074 aa13.51□□□□□ -0.25
BNIP3-202ENST00000540159 TGFBIQ15582 683 aa13.51□□□□□ -0.25
BNIP3-202ENST00000540159 C6orf136Q5SQH8 315 aa13.51□□□□□ -0.25
BNIP3-202ENST00000540159 RGMBQ6NW40 437 aa13.51□□□□□ -0.25
BNIP3-202ENST00000540159 FUT10Q6P4F1 479 aa13.51□□□□□ -0.25
BNIP3-202ENST00000540159 GPRIN3Q6ZVF9 776 aa13.51□□□□□ -0.25
BNIP3-202ENST00000540159 LYSMD3Q7Z3D4 306 aa13.51□□□□□ -0.25
BNIP3-202ENST00000540159 SAPCD2Q86UD0 394 aa13.51□□□□□ -0.25
BNIP3-202ENST00000540159 PARP8Q8N3A8 854 aa13.51□□□□□ -0.25
BNIP3-202ENST00000540159 TRIB3Q96RU7 358 aa13.51□□□□□ -0.25
BNIP3-202ENST00000540159 GPR63Q9BZJ6 419 aa13.51□□□□□ -0.25
BNIP3-202ENST00000540159 TFB2MQ9H5Q4 396 aaKnown RBP13.51□□□□□ -0.25
BNIP3-202ENST00000540159 GID8Q9NWU2 228 aa13.51□□□□□ -0.25
BNIP3-202ENST00000540159 PIKFYVEQ9Y2I7 2098 aa13.51□□□□□ -0.25
BNIP3-202ENST00000540159 CHD7Q9P2D1 2997 aa13.51□□□□□ -0.25
BNIP3-202ENST00000540159 TMEM88BA6NKF7 163 aa13.5□□□□□ -0.25
BNIP3-202ENST00000540159 SLC38A8A6NNN8 435 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms