RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 GSTM2P28161 218 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 GP2P55259 537 aaKnown RBP13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 TPD52P55327 224 aaPredicted RBP13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 RPS3AP61247 264 aaKnown RBP13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 CBX2Q14781 532 aaPredicted RBP13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 RAB44Q7Z6P3 723 aaPredicted RBP13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 C8orf59Q8N0T1 100 aaPredicted RBP13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 OR10Q1Q8NGQ4 319 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 PNPT1Q8TCS8 783 aaKnown RBP13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 PROKR1Q8TCW9 393 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 ZNF347Q96SE7 839 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 MBOAT4Q96T53 435 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 YTHDF1Q9BYJ9 559 aaKnown RBP13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 MFSD1Q9H3U5 465 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 FAM118AQ9NWS6 357 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 MIOSQ9NXC5 875 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 KIAA1522Q9P206 1035 aaPredicted RBP13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 TSR3Q9UJK0 312 aaKnown RBP13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 BAG5Q9UL15 447 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 BRCA1P38398 1863 aaKnown RBP13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 UBA6A0AVT1 1052 aaPredicted RBP13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 MROH6A6NGR9 719 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 E9PAM4 449 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 IRAK2O43187 625 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 SLC2A3P11169 496 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 ZNF33AQ06730 810 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 FOXM1Q08050 763 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 CD47Q08722 323 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 LCP2Q13094 533 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 MAPK11Q15759 364 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 CTF1Q16619 201 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 C6orf141Q5SZD1 244 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 NDNFQ8TB73 568 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 FIG4Q92562 907 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 HMCESQ96FZ2 354 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 IMP4Q96G21 291 aaKnown RBP13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 CNDP2Q96KP4 475 aaKnown RBP13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 CCDC138Q96M89 665 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 KATNBL1Q9H079 304 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 SLC25A51Q9H1U9 297 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 FBXO10Q9UK96 956 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 HS3ST4Q9Y661 456 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 CCDC162PA2VCL2 907 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 CLDN25C9JDP6 229 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 SLC7A4O43246 635 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 TREHO43280 583 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 TGFBR1P36897 503 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 GALNT3Q14435 633 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 MANEALQ5VSG8 457 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 TMEM236Q5W0B7 351 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 SLCO6A1Q86UG4 719 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 FBXO39Q8N4B4 442 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 FNDC5Q8NAU1 212 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 OR6J1Q8NGC5 347 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 ITFG1Q8TB96 612 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 FRS2Q8WU20 508 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 PSMG2Q969U7 264 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 NRBF2Q96F24 287 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 SMARCD1Q96GM5 515 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 SMIM14Q96QK8 99 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 GAD1Q99259 594 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 RTP3Q9BQQ7 232 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 AGO3Q9H9G7 860 aaKnown RBP13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 ARNT2Q9HBZ2 717 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 ATP13A1Q9HD20 1204 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 MTRRQ9UBK8 725 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 RNF112Q9ULX5 631 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 TSC22D4Q9Y3Q8 395 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 U3KQV3 271 aa13.8□□□□□ -0.2
SCNN1A-215ENST00000540037 ECI2O75521 394 aa13.79□□□□□ -0.2
SCNN1A-215ENST00000540037 UMPSP11172 480 aa13.79□□□□□ -0.2
SCNN1A-215ENST00000540037 CDH1P12830 882 aa13.79□□□□□ -0.2
SCNN1A-215ENST00000540037 HTR1EP28566 365 aa13.79□□□□□ -0.2
SCNN1A-215ENST00000540037 EEFSECP57772 596 aaKnown RBP13.79□□□□□ -0.2
SCNN1A-215ENST00000540037 EMX2Q04743 252 aa13.79□□□□□ -0.2
SCNN1A-215ENST00000540037 INAVAQ3KP66 663 aa13.79□□□□□ -0.2
SCNN1A-215ENST00000540037 SETMARQ53H47 684 aaPredicted RBP13.79□□□□□ -0.2
SCNN1A-215ENST00000540037 PGBD5Q8N414 524 aa13.79□□□□□ -0.2
SCNN1A-215ENST00000540037 ISG20Q96AZ6 181 aaKnown RBP13.79□□□□□ -0.2
SCNN1A-215ENST00000540037 LRRC3Q9BY71 257 aa13.79□□□□□ -0.2
SCNN1A-215ENST00000540037 MROQ9BYG7 248 aa13.79□□□□□ -0.2
SCNN1A-215ENST00000540037 LEF1Q9UJU2 399 aaPredicted RBP13.79□□□□□ -0.2
SCNN1A-215ENST00000540037 PDE10AQ9Y233 779 aa13.79□□□□□ -0.2
SCNN1A-215ENST00000540037 NPEPPSL1A6NEC2 478 aa13.79□□□□□ -0.2
SCNN1A-215ENST00000540037 G3V2T6 193 aa13.79□□□□□ -0.2
SCNN1A-215ENST00000540037 KPNA4O00629 521 aaPredicted RBP13.79□□□□□ -0.2
SCNN1A-215ENST00000540037 CD3EAPO15446 510 aaKnown RBP13.79□□□□□ -0.2
SCNN1A-215ENST00000540037 OXSR1O95747 527 aaPredicted RBP13.79□□□□□ -0.2
SCNN1A-215ENST00000540037 FMO4P31512 558 aa13.79□□□□□ -0.2
SCNN1A-215ENST00000540037 RCVRNP35243 200 aa13.79□□□□□ -0.2
SCNN1A-215ENST00000540037 KCNAB2Q13303 367 aa13.79□□□□□ -0.2
SCNN1A-215ENST00000540037 SKIV2LQ15477 1246 aaKnown RBP13.79□□□□□ -0.2
SCNN1A-215ENST00000540037 AASDHQ4L235 1098 aaPredicted RBP13.79□□□□□ -0.2
SCNN1A-215ENST00000540037 SULT1C3Q6IMI6 304 aa13.79□□□□□ -0.2
SCNN1A-215ENST00000540037 TAF2Q6P1X5 1199 aa13.79□□□□□ -0.2
SCNN1A-215ENST00000540037 DLEU7Q6UYE1 221 aa13.79□□□□□ -0.2
SCNN1A-215ENST00000540037 TMEM179BQ7Z7N9 219 aa13.79□□□□□ -0.2
SCNN1A-215ENST00000540037 CDYL2Q8N8U2 506 aa13.79□□□□□ -0.2
SCNN1A-215ENST00000540037 CNIH3Q8TBE1 160 aa13.79□□□□□ -0.2
SCNN1A-215ENST00000540037 RHNO1Q9BSD3 238 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms