RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 MMP20O60882 483 aa11.66□□□□□ -0.54
VTN-202ENST00000539746 DNAJC6O75061 913 aa11.66□□□□□ -0.54
VTN-202ENST00000539746 CDK14O94921 469 aa11.66□□□□□ -0.54
VTN-202ENST00000539746 SEMA4FO95754 770 aa11.66□□□□□ -0.54
VTN-202ENST00000539746 C8GP07360 202 aa11.66□□□□□ -0.54
VTN-202ENST00000539746 MYCLP1P12525 358 aaPredicted RBP11.66□□□□□ -0.54
VTN-202ENST00000539746 CHN1P15882 459 aa11.66□□□□□ -0.54
VTN-202ENST00000539746 NDUFV2P19404 249 aa11.66□□□□□ -0.54
VTN-202ENST00000539746 CD6P30203 668 aa11.66□□□□□ -0.54
VTN-202ENST00000539746 PIK3CGP48736 1102 aa11.66□□□□□ -0.54
VTN-202ENST00000539746 TPMTP51580 245 aa11.66□□□□□ -0.54
VTN-202ENST00000539746 LRP8Q14114 963 aa11.66□□□□□ -0.54
VTN-202ENST00000539746 PDE1CQ14123 709 aaPredicted RBP11.66□□□□□ -0.54
VTN-202ENST00000539746 KCTD19Q17RG1 926 aaPredicted RBP11.66□□□□□ -0.54
VTN-202ENST00000539746 POM121L1PQ3SYA9 428 aa11.66□□□□□ -0.54
VTN-202ENST00000539746 BCL7AQ4VC05 210 aa11.66□□□□□ -0.54
VTN-202ENST00000539746 ATP13A5Q4VNC0 1218 aa11.66□□□□□ -0.54
VTN-202ENST00000539746 GPRC6AQ5T6X5 926 aa11.66□□□□□ -0.54
VTN-202ENST00000539746 PSAPL1Q6NUJ1 521 aa11.66□□□□□ -0.54
VTN-202ENST00000539746 PNCKQ6P2M8 343 aa11.66□□□□□ -0.54
VTN-202ENST00000539746 CNSTQ6PJW8 725 aa11.66□□□□□ -0.54
VTN-202ENST00000539746 RGS9BPQ6ZS82 235 aa11.66□□□□□ -0.54
VTN-202ENST00000539746 LPCAT2Q7L5N7 544 aa11.66□□□□□ -0.54
VTN-202ENST00000539746 RABEPKQ7Z6M1 372 aa11.66□□□□□ -0.54
VTN-202ENST00000539746 AADATQ8N5Z0 425 aa11.66□□□□□ -0.54
VTN-202ENST00000539746 ZBTB2Q8N680 514 aa11.66□□□□□ -0.54
VTN-202ENST00000539746 ANKS4BQ8N8V4 417 aa11.66□□□□□ -0.54
VTN-202ENST00000539746 ANKRD42Q8N9B4 389 aa11.66□□□□□ -0.54
VTN-202ENST00000539746 ST13P5Q8NFI4 369 aaPredicted RBP11.66□□□□□ -0.54
VTN-202ENST00000539746 TCP10LQ8TDR4 215 aa11.66□□□□□ -0.54
VTN-202ENST00000539746 ATL1Q8WXF7 558 aa11.66□□□□□ -0.54
VTN-202ENST00000539746 ATXN7L3BQ96GX2 97 aa11.66□□□□□ -0.54
VTN-202ENST00000539746 PAIP2Q9BPZ3 127 aaKnown RBP11.66□□□□□ -0.54
VTN-202ENST00000539746 CCM2Q9BSQ5 444 aa11.66□□□□□ -0.54
VTN-202ENST00000539746 MKRN2Q9H000 416 aaKnown RBP11.66□□□□□ -0.54
VTN-202ENST00000539746 P2RY12Q9H244 342 aa11.66□□□□□ -0.54
VTN-202ENST00000539746 NCKIPSDQ9NZQ3 722 aa11.66□□□□□ -0.54
VTN-202ENST00000539746 MTO1Q9Y2Z2 717 aaKnown RBP11.66□□□□□ -0.54
VTN-202ENST00000539746 HS3ST3A1Q9Y663 406 aa11.66□□□□□ -0.54
VTN-202ENST00000539746 COL4A3Q01955 1670 aa11.65□□□□□ -0.54
VTN-202ENST00000539746 A0A1W2PQU0 124 aa11.65□□□□□ -0.54
VTN-202ENST00000539746 A8MX80 341 aa11.65□□□□□ -0.54
VTN-202ENST00000539746 TNFRSF10CO14798 259 aa11.65□□□□□ -0.54
VTN-202ENST00000539746 KMOO15229 486 aa11.65□□□□□ -0.54
VTN-202ENST00000539746 RAD51BO15315 384 aa11.65□□□□□ -0.54
VTN-202ENST00000539746 SNX2O60749 519 aa11.65□□□□□ -0.54
VTN-202ENST00000539746 TROVE2P10155 538 aaKnown RBP eCLIP11.65□□□□□ -0.54
VTN-202ENST00000539746 SLC2A4P14672 509 aa11.65□□□□□ -0.54
VTN-202ENST00000539746 CPA3P15088 417 aa11.65□□□□□ -0.54
VTN-202ENST00000539746 ZNF37AP17032 561 aaPredicted RBP11.65□□□□□ -0.54
VTN-202ENST00000539746 CYP2A7P20853 494 aa11.65□□□□□ -0.54
VTN-202ENST00000539746 TARSP26639 723 aaKnown RBP11.65□□□□□ -0.54
VTN-202ENST00000539746 MAP4P27816 1152 aaKnown RBP11.65□□□□□ -0.54
VTN-202ENST00000539746 RABIFP47224 123 aa11.65□□□□□ -0.54
VTN-202ENST00000539746 BLKP51451 505 aa11.65□□□□□ -0.54
VTN-202ENST00000539746 KIAA1024LP59773 190 aa11.65□□□□□ -0.54
VTN-202ENST00000539746 ZXDAP98168 799 aa11.65□□□□□ -0.54
VTN-202ENST00000539746 MESP2Q0VG99 397 aa11.65□□□□□ -0.54
VTN-202ENST00000539746 PDK4Q16654 411 aa11.65□□□□□ -0.54
VTN-202ENST00000539746 TMEM259Q4ZIN3 620 aa11.65□□□□□ -0.54
VTN-202ENST00000539746 CFAP157Q5JU67 520 aa11.65□□□□□ -0.54
VTN-202ENST00000539746 PIWIL4Q7Z3Z4 852 aaKnown RBP11.65□□□□□ -0.54
VTN-202ENST00000539746 NUDCD3Q8IVD9 361 aa11.65□□□□□ -0.54
VTN-202ENST00000539746 SLC41A1Q8IVJ1 513 aa11.65□□□□□ -0.54
VTN-202ENST00000539746 UNC5BQ8IZJ1 945 aa11.65□□□□□ -0.54
VTN-202ENST00000539746 CYP4X1Q8N118 509 aa11.65□□□□□ -0.54
VTN-202ENST00000539746 GLMNQ92990 594 aa11.65□□□□□ -0.54
VTN-202ENST00000539746 SERAC1Q96JX3 654 aa11.65□□□□□ -0.54
VTN-202ENST00000539746 LINC00615Q96LM1 132 aaPredicted RBP11.65□□□□□ -0.54
VTN-202ENST00000539746 NSMCE3Q96MG7 304 aa11.65□□□□□ -0.54
VTN-202ENST00000539746 TRIM56Q9BRZ2 755 aaKnown RBP11.65□□□□□ -0.54
VTN-202ENST00000539746 MTG2Q9H4K7 406 aa11.65□□□□□ -0.54
VTN-202ENST00000539746 MARCH4Q9P2E8 410 aaPredicted RBP11.65□□□□□ -0.54
VTN-202ENST00000539746 COL4A2P08572 1712 aa11.64□□□□□ -0.55
VTN-202ENST00000539746 A0A1W2PPM1 405 aa11.64□□□□□ -0.55
VTN-202ENST00000539746 IGLON5A6NGN9 336 aa11.64□□□□□ -0.55
VTN-202ENST00000539746 TMEM114B3SHH9 223 aa11.64□□□□□ -0.55
VTN-202ENST00000539746 SLCO1B7G3V0H7 640 aa11.64□□□□□ -0.55
VTN-202ENST00000539746 IFRD1O00458 451 aaPredicted RBP11.64□□□□□ -0.55
VTN-202ENST00000539746 DCXO43602 365 aa11.64□□□□□ -0.55
VTN-202ENST00000539746 TRIM16O95361 564 aa11.64□□□□□ -0.55
VTN-202ENST00000539746 SLC35E2BP0CK96 405 aa11.64□□□□□ -0.55
VTN-202ENST00000539746 CCDC166P0CW27 439 aa11.64□□□□□ -0.55
VTN-202ENST00000539746 MPC1LP0DKB6 136 aa11.64□□□□□ -0.55
VTN-202ENST00000539746 BMP1P13497 986 aa11.64□□□□□ -0.55
VTN-202ENST00000539746 GABRG2P18507 467 aa11.64□□□□□ -0.55
VTN-202ENST00000539746 ATP5F1P24539 256 aaPredicted RBP11.64□□□□□ -0.55
VTN-202ENST00000539746 RPA3P35244 121 aaPredicted RBP11.64□□□□□ -0.55
VTN-202ENST00000539746 TRIM23P36406 574 aa11.64□□□□□ -0.55
VTN-202ENST00000539746 HSD17B2P37059 387 aa11.64□□□□□ -0.55
VTN-202ENST00000539746 PRLHRP49683 370 aa11.64□□□□□ -0.55
VTN-202ENST00000539746 HNMTP50135 292 aa11.64□□□□□ -0.55
VTN-202ENST00000539746 ATP1A2P50993 1020 aa11.64□□□□□ -0.55
VTN-202ENST00000539746 THOP1P52888 689 aa11.64□□□□□ -0.55
VTN-202ENST00000539746 NUBP1P53384 320 aa11.64□□□□□ -0.55
VTN-202ENST00000539746 AP1S2P56377 157 aa11.64□□□□□ -0.55
VTN-202ENST00000539746 TAS2R39P59534 338 aa11.64□□□□□ -0.55
VTN-202ENST00000539746 GNGT1P63211 74 aa11.64□□□□□ -0.55
VTN-202ENST00000539746 TMEM115Q12893 351 aaPredicted RBP11.64□□□□□ -0.55
VTN-202ENST00000539746 WDR45BQ5MNZ6 344 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms