RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 LLGL1Q15334 1064 aa14.79□□□□□ -0.04
USB1-203ENST00000539737 C4orf17Q53FE4 359 aa14.79□□□□□ -0.04
USB1-203ENST00000539737 DCAF12Q5T6F0 453 aa14.79□□□□□ -0.04
USB1-203ENST00000539737 LRRN4Q8WUT4 740 aa14.79□□□□□ -0.04
USB1-203ENST00000539737 STARD8Q92502 1023 aa14.79□□□□□ -0.04
USB1-203ENST00000539737 SPOCK2Q92563 424 aa14.79□□□□□ -0.04
USB1-203ENST00000539737 HAUS1Q96CS2 278 aa14.79□□□□□ -0.04
USB1-203ENST00000539737 QKIQ96PU8 341 aaKnown RBP eCLIP14.79□□□□□ -0.04
USB1-203ENST00000539737 SPRY4Q9C004 299 aa14.79□□□□□ -0.04
USB1-203ENST00000539737 CDH19Q9H159 772 aa14.79□□□□□ -0.04
USB1-203ENST00000539737 TRNAU1APQ9NX07 287 aaKnown RBP14.79□□□□□ -0.04
USB1-203ENST00000539737 ZW10O43264 779 aa14.78□□□□□ -0.04
USB1-203ENST00000539737 HTRA2O43464 458 aaPredicted RBP14.78□□□□□ -0.04
USB1-203ENST00000539737 STK17BO94768 372 aa14.78□□□□□ -0.04
USB1-203ENST00000539737 JCHAINP01591 159 aa14.78□□□□□ -0.04
USB1-203ENST00000539737 PDGFAP04085 211 aa14.78□□□□□ -0.04
USB1-203ENST00000539737 PDHA1P08559 390 aa14.78□□□□□ -0.04
USB1-203ENST00000539737 PYGMP11217 842 aa14.78□□□□□ -0.04
USB1-203ENST00000539737 ADCY2Q08462 1091 aa14.78□□□□□ -0.04
USB1-203ENST00000539737 ZBTB17Q13105 803 aa14.78□□□□□ -0.04
USB1-203ENST00000539737 XRCC4Q13426 336 aa14.78□□□□□ -0.04
USB1-203ENST00000539737 NOMO1Q15155 1222 aa14.78□□□□□ -0.04
USB1-203ENST00000539737 SEL1L2Q5TEA6 688 aa14.78□□□□□ -0.04
USB1-203ENST00000539737 TMEM71Q6P5X7 295 aa14.78□□□□□ -0.04
USB1-203ENST00000539737 KDELC2Q7Z4H8 507 aa14.78□□□□□ -0.04
USB1-203ENST00000539737 NLGN4XQ8N0W4 816 aa14.78□□□□□ -0.04
USB1-203ENST00000539737 NLGN4YQ8NFZ3 816 aaPredicted RBP14.78□□□□□ -0.04
USB1-203ENST00000539737 NCSTNQ92542 709 aa14.78□□□□□ -0.04
USB1-203ENST00000539737 MIB2Q96AX9 1013 aa14.78□□□□□ -0.04
USB1-203ENST00000539737 ELMO2Q96JJ3 720 aa14.78□□□□□ -0.04
USB1-203ENST00000539737 SLC45A3Q96JT2 553 aa14.78□□□□□ -0.04
USB1-203ENST00000539737 OR2M4Q96R27 311 aa14.78□□□□□ -0.04
USB1-203ENST00000539737 SLC38A3Q99624 504 aa14.78□□□□□ -0.04
USB1-203ENST00000539737 FERMT1Q9BQL6 677 aa14.78□□□□□ -0.04
USB1-203ENST00000539737 TBC1D10AQ9BXI6 508 aa14.78□□□□□ -0.04
USB1-203ENST00000539737 ABCG8Q9H221 673 aa14.78□□□□□ -0.04
USB1-203ENST00000539737 KCNF1Q9H3M0 494 aa14.78□□□□□ -0.04
USB1-203ENST00000539737 ARFGAP3Q9NP61 516 aa14.78□□□□□ -0.04
USB1-203ENST00000539737 SAE1Q9UBE0 346 aaPredicted RBP14.78□□□□□ -0.04
USB1-203ENST00000539737 DNPEPQ9ULA0 475 aa14.78□□□□□ -0.04
USB1-203ENST00000539737 KCNK6Q9Y257 313 aa14.78□□□□□ -0.04
USB1-203ENST00000539737 OAS3Q9Y6K5 1087 aaKnown RBP14.78□□□□□ -0.04
USB1-203ENST00000539737 PSMD11O00231 422 aa14.77□□□□□ -0.05
USB1-203ENST00000539737 DNAJB5O75953 348 aa14.77□□□□□ -0.05
USB1-203ENST00000539737 ATP1A1P05023 1023 aaKnown RBP14.77□□□□□ -0.05
USB1-203ENST00000539737 GPR1P46091 355 aa14.77□□□□□ -0.05
USB1-203ENST00000539737 GFERP55789 205 aa14.77□□□□□ -0.05
USB1-203ENST00000539737 RPS6KA1Q15418 735 aa14.77□□□□□ -0.05
USB1-203ENST00000539737 LACTB2Q53H82 288 aaPredicted RBP14.77□□□□□ -0.05
USB1-203ENST00000539737 ZNF648Q5T619 568 aaPredicted RBP14.77□□□□□ -0.05
USB1-203ENST00000539737 MEI1Q5TIA1 1274 aa14.77□□□□□ -0.05
USB1-203ENST00000539737 ZC3H18Q86VM9 953 aaKnown RBP14.77□□□□□ -0.05
USB1-203ENST00000539737 CDKL3Q8IVW4 592 aaPredicted RBP14.77□□□□□ -0.05
USB1-203ENST00000539737 CBARPQ8N350 705 aaPredicted RBP14.77□□□□□ -0.05
USB1-203ENST00000539737 FAM26EQ8N5C1 309 aa14.77□□□□□ -0.05
USB1-203ENST00000539737 TTC13Q8NBP0 860 aa14.77□□□□□ -0.05
USB1-203ENST00000539737 AHCYL2Q96HN2 611 aaKnown RBP14.77□□□□□ -0.05
USB1-203ENST00000539737 VAT1Q99536 393 aa14.77□□□□□ -0.05
USB1-203ENST00000539737 ANAPC2Q9UJX6 822 aa14.77□□□□□ -0.05
USB1-203ENST00000539737 CENPEQ02224 2701 aa14.76□□□□□ -0.05
USB1-203ENST00000539737 B4E171 279 aa14.76□□□□□ -0.05
USB1-203ENST00000539737 H7C0C1 242 aa14.76□□□□□ -0.05
USB1-203ENST00000539737 SNX2O60749 519 aa14.76□□□□□ -0.05
USB1-203ENST00000539737 PGLSO95336 258 aa14.76□□□□□ -0.05
USB1-203ENST00000539737 IVLP07476 585 aa14.76□□□□□ -0.05
USB1-203ENST00000539737 PTPN3P26045 913 aa14.76□□□□□ -0.05
USB1-203ENST00000539737 TSPAN7P41732 249 aa14.76□□□□□ -0.05
USB1-203ENST00000539737 GPR3P46089 330 aa14.76□□□□□ -0.05
USB1-203ENST00000539737 ATP5OP48047 213 aa14.76□□□□□ -0.05
USB1-203ENST00000539737 SH3BP2P78314 561 aa14.76□□□□□ -0.05
USB1-203ENST00000539737 MC2RQ01718 297 aa14.76□□□□□ -0.05
USB1-203ENST00000539737 OTUD4Q01804 1114 aaKnown RBP14.76□□□□□ -0.05
USB1-203ENST00000539737 DSC2Q02487 901 aa14.76□□□□□ -0.05
USB1-203ENST00000539737 TRA2AQ13595 282 aaKnown RBP eCLIP14.76□□□□□ -0.05
USB1-203ENST00000539737 PYCR3Q53H96 274 aa14.76□□□□□ -0.05
USB1-203ENST00000539737 LRRC66Q68CR7 880 aa14.76□□□□□ -0.05
USB1-203ENST00000539737 TECPR1Q7Z6L1 1165 aa14.76□□□□□ -0.05
USB1-203ENST00000539737 ARRDC2Q8TBH0 407 aa14.76□□□□□ -0.05
USB1-203ENST00000539737 ACTL9Q8TC94 416 aa14.76□□□□□ -0.05
USB1-203ENST00000539737 SCRN2Q96FV2 425 aa14.76□□□□□ -0.05
USB1-203ENST00000539737 RUFY1Q96T51 708 aa14.76□□□□□ -0.05
USB1-203ENST00000539737 HERPUD2Q9BSE4 406 aa14.76□□□□□ -0.05
USB1-203ENST00000539737 TDRD1Q9BXT4 1180 aaKnown RBP14.76□□□□□ -0.05
USB1-203ENST00000539737 B3GNT4Q9C0J1 378 aa14.76□□□□□ -0.05
USB1-203ENST00000539737 CARD9Q9H257 536 aa14.76□□□□□ -0.05
USB1-203ENST00000539737 TBC1D29Q9UFV1 150 aa14.76□□□□□ -0.05
USB1-203ENST00000539737 STK10O94804 968 aaKnown RBP14.75□□□□□ -0.05
USB1-203ENST00000539737 ASMTLO95671 621 aa14.75□□□□□ -0.05
USB1-203ENST00000539737 DLGAP3O95886 979 aa14.75□□□□□ -0.05
USB1-203ENST00000539737 PYGLP06737 847 aa14.75□□□□□ -0.05
USB1-203ENST00000539737 TCN2P20062 427 aa14.75□□□□□ -0.05
USB1-203ENST00000539737 GNLYP22749 145 aa14.75□□□□□ -0.05
USB1-203ENST00000539737 MSNP26038 577 aaKnown RBP14.75□□□□□ -0.05
USB1-203ENST00000539737 RPL26P61254 145 aaKnown RBP14.75□□□□□ -0.05
USB1-203ENST00000539737 ERV3-1Q14264 604 aa14.75□□□□□ -0.05
USB1-203ENST00000539737 SLC14A2Q15849 920 aa14.75□□□□□ -0.05
USB1-203ENST00000539737 TEX44Q53QW1 395 aa14.75□□□□□ -0.05
USB1-203ENST00000539737 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.75□□□□□ -0.05
USB1-203ENST00000539737 AADACL2Q6P093 401 aa14.75□□□□□ -0.05
USB1-203ENST00000539737 CHST15Q7LFX5 561 aaPredicted RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms