RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 USP22Q9UPT9 525 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 SCML2Q9UQR0 700 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 MED16Q9Y2X0 877 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 ZNF711Q9Y462 761 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 DRGXA6NNA5 263 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 ARNTLO00327 626 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 ABCB7O75027 752 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 DEAF1O75398 565 aaPredicted RBP9.58□□□□□ -0.88
CDH13-204ENST00000539548 TFPTP0C1Z6 253 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 PORP16435 677 aaPredicted RBP9.58□□□□□ -0.88
CDH13-204ENST00000539548 MAP4P27816 1152 aaKnown RBP9.58□□□□□ -0.88
CDH13-204ENST00000539548 IL12AP29459 219 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 PRDX3P30048 256 aaKnown RBP9.58□□□□□ -0.88
CDH13-204ENST00000539548 ARSFP54793 590 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 TRAF2Q12933 501 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 SERINC3Q13530 473 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 DAG1Q14118 895 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 TSNQ15631 228 aaKnown RBP9.58□□□□□ -0.88
CDH13-204ENST00000539548 PYCR3Q53H96 274 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 RBM48Q5RL73 367 aaKnown RBP9.58□□□□□ -0.88
CDH13-204ENST00000539548 C6orf136Q5SQH8 315 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 USP50Q70EL3 339 aaPredicted RBP9.58□□□□□ -0.88
CDH13-204ENST00000539548 FKBP9P1Q75LS8 142 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 CHST15Q7LFX5 561 aaPredicted RBP9.58□□□□□ -0.88
CDH13-204ENST00000539548 ZFAND4Q86XD8 727 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 NKAPQ8N5F7 415 aaKnown RBP9.58□□□□□ -0.88
CDH13-204ENST00000539548 OR56A4Q8NGH8 313 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 OR2T11Q8NH01 316 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 PROKR1Q8TCW9 393 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 CHPT1Q8WUD6 406 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 BRI3BPQ8WY22 251 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 SNX19Q92543 992 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 FUBP1Q96AE4 644 aaKnown RBP9.58□□□□□ -0.88
CDH13-204ENST00000539548 NRBF2Q96F24 287 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 GLT1D1Q96MS3 346 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 HGH1Q9BTY7 390 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 POLR1EQ9GZS1 481 aaKnown RBP9.58□□□□□ -0.88
CDH13-204ENST00000539548 CCDC68Q9H2F9 335 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 FANCEQ9HB96 536 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 NLE1Q9NVX2 485 aaPredicted RBP9.58□□□□□ -0.88
CDH13-204ENST00000539548 COQ6Q9Y2Z9 468 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 Q9Y3F1 56 aa9.58□□□□□ -0.88
CDH13-204ENST00000539548 PLXNA3P51805 1871 aa9.57□□□□□ -0.88
CDH13-204ENST00000539548 TRPM7Q96QT4 1865 aa9.57□□□□□ -0.88
CDH13-204ENST00000539548 MOXD2PA6NHM9 499 aa9.57□□□□□ -0.88
CDH13-204ENST00000539548 CDC7O00311 574 aa9.57□□□□□ -0.88
CDH13-204ENST00000539548 IFRD1O00458 451 aaPredicted RBP9.57□□□□□ -0.88
CDH13-204ENST00000539548 ZNF623O75123 536 aa9.57□□□□□ -0.88
CDH13-204ENST00000539548 BCL10O95999 233 aa9.57□□□□□ -0.88
CDH13-204ENST00000539548 HPRP00739 348 aa9.57□□□□□ -0.88
CDH13-204ENST00000539548 MT-ND1P03886 318 aa9.57□□□□□ -0.88
CDH13-204ENST00000539548 ALPLP05186 524 aa9.57□□□□□ -0.88
CDH13-204ENST00000539548 RAP2AP10114 183 aa9.57□□□□□ -0.88
CDH13-204ENST00000539548 THRBP10828 461 aa9.57□□□□□ -0.88
CDH13-204ENST00000539548 ZNF182P17025 639 aaPredicted RBP9.57□□□□□ -0.88
CDH13-204ENST00000539548 TYMPP19971 482 aa9.57□□□□□ -0.88
CDH13-204ENST00000539548 CES1P23141 567 aa9.57□□□□□ -0.88
CDH13-204ENST00000539548 EEF1B2P24534 225 aaKnown RBP9.57□□□□□ -0.88
CDH13-204ENST00000539548 ELK4P28324 431 aa9.57□□□□□ -0.88
CDH13-204ENST00000539548 FMO4P31512 558 aa9.57□□□□□ -0.88
CDH13-204ENST00000539548 SHMT2P34897 504 aa9.57□□□□□ -0.88
CDH13-204ENST00000539548 CASP2P42575 452 aa9.57□□□□□ -0.88
CDH13-204ENST00000539548 PRKG2Q13237 762 aa9.57□□□□□ -0.88
CDH13-204ENST00000539548 POLD3Q15054 466 aaPredicted RBP9.57□□□□□ -0.88
CDH13-204ENST00000539548 FAM110CQ1W6H9 321 aa9.57□□□□□ -0.88
CDH13-204ENST00000539548 PARP15Q460N3 678 aa9.57□□□□□ -0.88
CDH13-204ENST00000539548 TIGD2Q4W5G0 525 aa9.57□□□□□ -0.88
CDH13-204ENST00000539548 XAF1Q6GPH4 301 aa9.57□□□□□ -0.88
CDH13-204ENST00000539548 FBXL22Q6P050 247 aa9.57□□□□□ -0.88
CDH13-204ENST00000539548 C16orf87Q6PH81 154 aa9.57□□□□□ -0.88
CDH13-204ENST00000539548 DLEU7Q6UYE1 221 aa9.57□□□□□ -0.88
CDH13-204ENST00000539548 THAP5Q7Z6K1 395 aa9.57□□□□□ -0.88
CDH13-204ENST00000539548 ZC3H7AQ8IWR0 971 aaKnown RBP9.57□□□□□ -0.88
CDH13-204ENST00000539548 ATP6V0D2Q8N8Y2 350 aa9.57□□□□□ -0.88
CDH13-204ENST00000539548 RAB2BQ8WUD1 216 aa9.57□□□□□ -0.88
CDH13-204ENST00000539548 IGSF8Q969P0 613 aa9.57□□□□□ -0.88
CDH13-204ENST00000539548 TMBIM1Q969X1 311 aa9.57□□□□□ -0.88
CDH13-204ENST00000539548 AURKBQ96GD4 344 aaPredicted RBP9.57□□□□□ -0.88
CDH13-204ENST00000539548 MAGED4Q96JG8 741 aa9.57□□□□□ -0.88
CDH13-204ENST00000539548 SUSD3Q96L08 255 aa9.57□□□□□ -0.88
CDH13-204ENST00000539548 RDH12Q96NR8 316 aa9.57□□□□□ -0.88
CDH13-204ENST00000539548 MTG1Q9BT17 334 aaPredicted RBP9.57□□□□□ -0.88
CDH13-204ENST00000539548 PSME2Q9UL46 239 aa9.57□□□□□ -0.88
CDH13-204ENST00000539548 B3GNT3Q9Y2A9 372 aa9.57□□□□□ -0.88
CDH13-204ENST00000539548 UBA6A0AVT1 1052 aaPredicted RBP9.57□□□□□ -0.88
CDH13-204ENST00000539548 FUOMA2VDF0 154 aa9.57□□□□□ -0.88
CDH13-204ENST00000539548 C16orf96A6NNT2 1141 aa9.57□□□□□ -0.88
CDH13-204ENST00000539548 BOLA2-SMG1P6H3BVE0 249 aa9.57□□□□□ -0.88
CDH13-204ENST00000539548 ENPP3O14638 875 aa9.57□□□□□ -0.88
CDH13-204ENST00000539548 SYNCRIPO60506 623 aaKnown RBP9.57□□□□□ -0.88
CDH13-204ENST00000539548 KPNA6O60684 536 aa9.57□□□□□ -0.88
CDH13-204ENST00000539548 PRAMEF11O60813 436 aa9.57□□□□□ -0.88
CDH13-204ENST00000539548 RAMP2O60895 175 aa9.57□□□□□ -0.88
CDH13-204ENST00000539548 GJB3O75712 270 aa9.57□□□□□ -0.88
CDH13-204ENST00000539548 SULT1C4O75897 302 aa9.57□□□□□ -0.88
CDH13-204ENST00000539548 NDST3O95803 873 aa9.57□□□□□ -0.88
CDH13-204ENST00000539548 POMCP01189 267 aa9.57□□□□□ -0.88
CDH13-204ENST00000539548 ANXA6P08133 673 aa9.57□□□□□ -0.88
CDH13-204ENST00000539548 OCM2P0CE71 109 aa9.57□□□□□ -0.88
CDH13-204ENST00000539548 OCMP0CE72 109 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms