RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 KHDC1Q4VXA5 237 aaKnown RBP13.97□□□□□ -0.17
ACTN1-205ENST00000538545 OR9I1Q8NGQ6 314 aa13.97□□□□□ -0.17
ACTN1-205ENST00000538545 STAG3L4Q8TBR4 150 aa13.97□□□□□ -0.17
ACTN1-205ENST00000538545 BPIFB1Q8TDL5 484 aa13.97□□□□□ -0.17
ACTN1-205ENST00000538545 KCNJ9Q92806 393 aa13.97□□□□□ -0.17
ACTN1-205ENST00000538545 PLA2G2FQ9BZM2 168 aa13.97□□□□□ -0.17
ACTN1-205ENST00000538545 PCDH12Q9NPG4 1184 aa13.97□□□□□ -0.17
ACTN1-205ENST00000538545 CORO1CQ9ULV4 474 aaPredicted RBP13.97□□□□□ -0.17
ACTN1-205ENST00000538545 KPNA3O00505 521 aaPredicted RBP13.96□□□□□ -0.17
ACTN1-205ENST00000538545 AIM2O14862 343 aa13.96□□□□□ -0.17
ACTN1-205ENST00000538545 KERAO60938 352 aa13.96□□□□□ -0.17
ACTN1-205ENST00000538545 ESR1P03372 595 aa13.96□□□□□ -0.17
ACTN1-205ENST00000538545 PFKLP17858 780 aa13.96□□□□□ -0.17
ACTN1-205ENST00000538545 CPOXP36551 454 aa13.96□□□□□ -0.17
ACTN1-205ENST00000538545 ARL1P40616 181 aaPredicted RBP13.96□□□□□ -0.17
ACTN1-205ENST00000538545 ASPHQ12797 758 aa13.96□□□□□ -0.17
ACTN1-205ENST00000538545 GAB4Q2WGN9 574 aa13.96□□□□□ -0.17
ACTN1-205ENST00000538545 KCNV2Q8TDN2 545 aa13.96□□□□□ -0.17
ACTN1-205ENST00000538545 CCDC124Q96CT7 223 aaKnown RBP13.96□□□□□ -0.17
ACTN1-205ENST00000538545 RAB3IPQ96QF0 476 aaPredicted RBP13.96□□□□□ -0.17
ACTN1-205ENST00000538545 ACOX2Q99424 681 aa13.96□□□□□ -0.17
ACTN1-205ENST00000538545 HEPHQ9BQS7 1158 aa13.96□□□□□ -0.17
ACTN1-205ENST00000538545 WRAP53Q9BUR4 548 aaKnown RBP13.96□□□□□ -0.17
ACTN1-205ENST00000538545 TFB2MQ9H5Q4 396 aaKnown RBP13.96□□□□□ -0.17
ACTN1-205ENST00000538545 CD274Q9NZQ7 290 aa13.96□□□□□ -0.17
ACTN1-205ENST00000538545 CIDEBQ9UHD4 219 aa13.96□□□□□ -0.17
ACTN1-205ENST00000538545 ZNF225Q9UK10 706 aa13.96□□□□□ -0.17
ACTN1-205ENST00000538545 DNAJC15Q9Y5T4 150 aa13.96□□□□□ -0.17
ACTN1-205ENST00000538545 COMMD10Q9Y6G5 202 aa13.96□□□□□ -0.17
ACTN1-205ENST00000538545 ZNF7P17097 686 aaPredicted RBP13.96□□□□□ -0.17
ACTN1-205ENST00000538545 FSHRP23945 695 aa13.96□□□□□ -0.17
ACTN1-205ENST00000538545 PIK3R1P27986 724 aa13.96□□□□□ -0.17
ACTN1-205ENST00000538545 WASP42768 502 aa13.96□□□□□ -0.17
ACTN1-205ENST00000538545 MAPK8P45983 427 aa13.96□□□□□ -0.17
ACTN1-205ENST00000538545 PHKG1Q16816 387 aa13.96□□□□□ -0.17
ACTN1-205ENST00000538545 AARS2Q5JTZ9 985 aaKnown RBP13.96□□□□□ -0.17
ACTN1-205ENST00000538545 SNX32Q86XE0 403 aa13.96□□□□□ -0.17
ACTN1-205ENST00000538545 SLC22A9Q8IVM8 553 aa13.96□□□□□ -0.17
ACTN1-205ENST00000538545 NXPE1Q8N323 547 aa13.96□□□□□ -0.17
ACTN1-205ENST00000538545 OR52B6Q8NGF0 335 aa13.96□□□□□ -0.17
ACTN1-205ENST00000538545 ISG20Q96AZ6 181 aaKnown RBP13.96□□□□□ -0.17
ACTN1-205ENST00000538545 SIKE1Q9BRV8 207 aa13.96□□□□□ -0.17
ACTN1-205ENST00000538545 HTATIP2Q9BUP3 242 aa13.96□□□□□ -0.17
ACTN1-205ENST00000538545 COPG1Q9Y678 874 aaKnown RBP13.96□□□□□ -0.17
ACTN1-205ENST00000538545 GOLGA4Q13439 2230 aaKnown RBP13.96□□□□□ -0.18
ACTN1-205ENST00000538545 SLC26A3P40879 764 aa13.96□□□□□ -0.18
ACTN1-205ENST00000538545 CLCQ05315 142 aa13.96□□□□□ -0.18
ACTN1-205ENST00000538545 DLX2Q07687 328 aaPredicted RBP13.96□□□□□ -0.18
ACTN1-205ENST00000538545 TGFBIQ15582 683 aa13.96□□□□□ -0.18
ACTN1-205ENST00000538545 ACAD11Q709F0 780 aa13.96□□□□□ -0.18
ACTN1-205ENST00000538545 STK40Q8N2I9 435 aa13.96□□□□□ -0.18
ACTN1-205ENST00000538545 FOXJ1Q92949 421 aa13.96□□□□□ -0.18
ACTN1-205ENST00000538545 SAMD11Q96NU1 681 aa13.96□□□□□ -0.18
ACTN1-205ENST00000538545 KXD1Q9BQD3 176 aa13.96□□□□□ -0.18
ACTN1-205ENST00000538545 TACO1Q9BSH4 297 aaKnown RBP13.96□□□□□ -0.18
ACTN1-205ENST00000538545 SPATA16Q9BXB7 569 aa13.96□□□□□ -0.18
ACTN1-205ENST00000538545 TUBB1Q9H4B7 451 aa13.96□□□□□ -0.18
ACTN1-205ENST00000538545 HPS4Q9NQG7 708 aa13.96□□□□□ -0.18
ACTN1-205ENST00000538545 DHRS7Q9Y394 339 aa13.96□□□□□ -0.18
ACTN1-205ENST00000538545 LINC00032P0C843 101 aa13.95□□□□□ -0.18
ACTN1-205ENST00000538545 COX4I1P13073 169 aa13.95□□□□□ -0.18
ACTN1-205ENST00000538545 TIMP2P16035 220 aa13.95□□□□□ -0.18
ACTN1-205ENST00000538545 SPINT3P49223 89 aa13.95□□□□□ -0.18
ACTN1-205ENST00000538545 MNAT1P51948 309 aa13.95□□□□□ -0.18
ACTN1-205ENST00000538545 COPAP53621 1224 aa13.95□□□□□ -0.18
ACTN1-205ENST00000538545 NAA25Q14CX7 972 aa13.95□□□□□ -0.18
ACTN1-205ENST00000538545 FAM91A1Q658Y4 838 aa13.95□□□□□ -0.18
ACTN1-205ENST00000538545 GK5Q6ZS86 529 aa13.95□□□□□ -0.18
ACTN1-205ENST00000538545 RBFAQ8N0V3 343 aa13.95□□□□□ -0.18
ACTN1-205ENST00000538545 RNF148Q8N7C7 305 aa13.95□□□□□ -0.18
ACTN1-205ENST00000538545 LEMD2Q8NC56 503 aa13.95□□□□□ -0.18
ACTN1-205ENST00000538545 RHEBL1Q8TAI7 183 aa13.95□□□□□ -0.18
ACTN1-205ENST00000538545 HMGCLL1Q8TB92 370 aa13.95□□□□□ -0.18
ACTN1-205ENST00000538545 DTX3LQ8TDB6 740 aa13.95□□□□□ -0.18
ACTN1-205ENST00000538545 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.95□□□□□ -0.181e-6■■■■■ 31.4
ACTN1-205ENST00000538545 CCDC126Q96EE4 140 aa13.95□□□□□ -0.18
ACTN1-205ENST00000538545 L3HYPDHQ96EM0 354 aa13.95□□□□□ -0.18
ACTN1-205ENST00000538545 MCCC1Q96RQ3 725 aaPredicted RBP13.95□□□□□ -0.18
ACTN1-205ENST00000538545 CPEB1Q9BZB8 566 aaKnown RBP13.95□□□□□ -0.18
ACTN1-205ENST00000538545 NSUN3Q9H649 340 aaKnown RBP13.95□□□□□ -0.18
ACTN1-205ENST00000538545 STN1Q9H668 368 aaKnown RBP13.95□□□□□ -0.18
ACTN1-205ENST00000538545 POPDC3Q9HBV1 291 aa13.95□□□□□ -0.18
ACTN1-205ENST00000538545 ELOVL2Q9NXB9 296 aa13.95□□□□□ -0.18
ACTN1-205ENST00000538545 APPL1Q9UKG1 709 aa13.95□□□□□ -0.18
ACTN1-205ENST00000538545 OR2AG2A6NM03 316 aa13.95□□□□□ -0.18
ACTN1-205ENST00000538545 F8W8V4 182 aa13.95□□□□□ -0.18
ACTN1-205ENST00000538545 NNMTP40261 264 aa13.95□□□□□ -0.18
ACTN1-205ENST00000538545 RPL26P61254 145 aaKnown RBP13.95□□□□□ -0.18
ACTN1-205ENST00000538545 KCNC3Q14003 757 aa13.95□□□□□ -0.18
ACTN1-205ENST00000538545 ARHGEF7Q14155 803 aa13.95□□□□□ -0.18
ACTN1-205ENST00000538545 SLC44A4Q53GD3 710 aa13.95□□□□□ -0.18
ACTN1-205ENST00000538545 SBSNQ6UWP8 590 aa13.95□□□□□ -0.18
ACTN1-205ENST00000538545 GPSM1Q86YR5 675 aa13.95□□□□□ -0.18
ACTN1-205ENST00000538545 VRK3Q8IV63 474 aa13.95□□□□□ -0.18
ACTN1-205ENST00000538545 DDIASQ8IXT1 998 aa13.95□□□□□ -0.18
ACTN1-205ENST00000538545 NKAPQ8N5F7 415 aaKnown RBP13.95□□□□□ -0.18
ACTN1-205ENST00000538545 SMARCD2Q92925 531 aa13.95□□□□□ -0.18
ACTN1-205ENST00000538545 SLC28A3Q9HAS3 691 aa13.95□□□□□ -0.18
ACTN1-205ENST00000538545 MARK1Q9P0L2 795 aa13.95□□□□□ -0.18
ACTN1-205ENST00000538545 RPL26L1Q9UNX3 145 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms