RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 ATP6AP2A0A1C7CYW4 349 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 FAM187AA6NFU0 413 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 A6NL46 340 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 PSMD3O43242 534 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 HRO43593 1189 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 ATP6AP2O75787 350 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 AP2A1O95782 977 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 PRKAR1AP10644 381 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 BPIP17213 487 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 NCF2P19878 526 aaPredicted RBP7.16□□□□□ -1.26
MSH6-209ENST00000538136 BDKRB1P46663 353 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 CTSCP53634 463 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 AIF1P55008 147 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 MTA1Q13330 715 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 RCN2Q14257 317 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 PAPD7Q5XG87 772 aaKnown RBP7.16□□□□□ -1.26
MSH6-209ENST00000538136 PIANPQ8IYJ0 282 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 CPXM2Q8N436 756 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 RAB3IL1Q8TBN0 382 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 CALML6Q8TD86 181 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 ACTRT1Q8TDG2 376 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 MRGPRX2Q96LB1 330 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 MIPEPQ99797 713 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 TDRD1Q9BXT4 1180 aaKnown RBP7.16□□□□□ -1.26
MSH6-209ENST00000538136 CD248Q9HCU0 757 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 STARD5Q9NSY2 213 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 SENP1Q9P0U3 644 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 EBF1Q9UH73 591 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 SNX11Q9Y5W9 270 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 A0A096LPK6 155 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 TNNI3P19429 210 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 SERPINB3P29508 390 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 HMOX2P30519 316 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 BLKP51451 505 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 AFF3P51826 1226 aaKnown RBP7.16□□□□□ -1.26
MSH6-209ENST00000538136 OVGP1Q12889 678 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 SPIDRQ14159 915 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 GALNTL6Q49A17 601 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 RBM20Q5T481 1227 aaKnown RBP7.16□□□□□ -1.26
MSH6-209ENST00000538136 GPR135Q8IZ08 494 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 BRSK1Q8TDC3 778 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 TFGQ92734 400 aaPredicted RBP7.16□□□□□ -1.26
MSH6-209ENST00000538136 NRTNQ99748 197 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 FGF22Q9HCT0 170 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 RXFP3Q9NSD7 469 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 ALKBH4Q9NXW9 302 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 TBC1D30Q9Y2I9 924 aa7.16□□□□□ -1.26
MSH6-209ENST00000538136 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.16□□□□□ -1.26
MSH6-209ENST00000538136 TNRC18O15417 2968 aaPredicted RBP7.15□□□□□ -1.26
MSH6-209ENST00000538136 IQANK1A0A1B0GTG1 560 aa7.15□□□□□ -1.26
MSH6-209ENST00000538136 NVLO15381 856 aaKnown RBP7.15□□□□□ -1.26
MSH6-209ENST00000538136 DIAPH2O60879 1101 aa7.15□□□□□ -1.26
MSH6-209ENST00000538136 HSPA9P38646 679 aaKnown RBP7.15□□□□□ -1.26
MSH6-209ENST00000538136 CTBSQ01459 385 aa7.15□□□□□ -1.26
MSH6-209ENST00000538136 MGAT5Q09328 741 aa7.15□□□□□ -1.26
MSH6-209ENST00000538136 CRYMQ14894 314 aa7.15□□□□□ -1.26
MSH6-209ENST00000538136 ZNF789Q5FWF6 425 aa7.15□□□□□ -1.26
MSH6-209ENST00000538136 AARS2Q5JTZ9 985 aaKnown RBP7.15□□□□□ -1.26
MSH6-209ENST00000538136 HDXQ7Z353 690 aa7.15□□□□□ -1.26
MSH6-209ENST00000538136 WDR92Q96MX6 357 aa7.15□□□□□ -1.26
MSH6-209ENST00000538136 VPS45Q9NRW7 570 aa7.15□□□□□ -1.26
MSH6-209ENST00000538136 EPS15L1Q9UBC2 864 aa7.15□□□□□ -1.26
MSH6-209ENST00000538136 SUFUQ9UMX1 484 aa7.15□□□□□ -1.26
MSH6-209ENST00000538136 NFS1Q9Y697 457 aa7.15□□□□□ -1.26
MSH6-209ENST00000538136 A0A087WUV0 522 aaPredicted RBP7.15□□□□□ -1.26
MSH6-209ENST00000538136 GOLGA8QA0A0J9YX86 632 aa7.15□□□□□ -1.26
MSH6-209ENST00000538136 GOLGA8OA6NCC3 632 aa7.15□□□□□ -1.26
MSH6-209ENST00000538136 F8W8V4 182 aa7.15□□□□□ -1.26
MSH6-209ENST00000538136 GOLGA8NF8WBI6 632 aa7.15□□□□□ -1.26
MSH6-209ENST00000538136 HOXC11O43248 304 aaPredicted RBP7.15□□□□□ -1.26
MSH6-209ENST00000538136 F10P00742 488 aa7.15□□□□□ -1.26
MSH6-209ENST00000538136 LMNAP02545 664 aaKnown RBP7.15□□□□□ -1.26
MSH6-209ENST00000538136 GBAP04062 536 aa7.15□□□□□ -1.26
MSH6-209ENST00000538136 SHBGP04278 402 aa7.15□□□□□ -1.26
MSH6-209ENST00000538136 LHCGRP22888 699 aa7.15□□□□□ -1.26
MSH6-209ENST00000538136 PLA2G16P53816 162 aa7.15□□□□□ -1.26
MSH6-209ENST00000538136 ENPEPQ07075 957 aa7.15□□□□□ -1.26
MSH6-209ENST00000538136 GRM3Q14832 879 aa7.15□□□□□ -1.26
MSH6-209ENST00000538136 PDCD2Q16342 344 aaPredicted RBP7.15□□□□□ -1.26
MSH6-209ENST00000538136 KLHL38Q2WGJ6 581 aa7.15□□□□□ -1.26
MSH6-209ENST00000538136 MCOLN3Q8TDD5 553 aa7.15□□□□□ -1.26
MSH6-209ENST00000538136 DNASE1L2Q92874 299 aa7.15□□□□□ -1.26
MSH6-209ENST00000538136 RUNDC3BQ96NL0 473 aa7.15□□□□□ -1.26
MSH6-209ENST00000538136 LRRC19Q9H756 370 aa7.15□□□□□ -1.26
MSH6-209ENST00000538136 IL26Q9NPH9 171 aa7.15□□□□□ -1.26
MSH6-209ENST00000538136 PRKAG3Q9UGI9 489 aa7.15□□□□□ -1.26
MSH6-209ENST00000538136 RABGEF1Q9UJ41 708 aa7.15□□□□□ -1.26
MSH6-209ENST00000538136 ACOT9Q9Y305 439 aa7.15□□□□□ -1.26
MSH6-209ENST00000538136 MYO15AQ9UKN7 3530 aa7.15□□□□□ -1.27
MSH6-209ENST00000538136 CACNA1CQ13936 2221 aa7.15□□□□□ -1.27
MSH6-209ENST00000538136 A0A0G2JND7 137 aa7.15□□□□□ -1.27
MSH6-209ENST00000538136 CFLARO15519 480 aa7.15□□□□□ -1.27
MSH6-209ENST00000538136 PENKP01210 267 aaPredicted RBP7.15□□□□□ -1.27
MSH6-209ENST00000538136 CATP04040 527 aaKnown RBP7.15□□□□□ -1.27
MSH6-209ENST00000538136 NTRK1P04629 796 aa7.15□□□□□ -1.27
MSH6-209ENST00000538136 CELA2BP08218 269 aaPredicted RBP7.15□□□□□ -1.27
MSH6-209ENST00000538136 SYPP08247 313 aa7.15□□□□□ -1.27
MSH6-209ENST00000538136 TFEBP19484 476 aa7.15□□□□□ -1.27
MSH6-209ENST00000538136 CSTF2P33240 577 aaKnown RBP eCLIP7.15□□□□□ -1.27
MSH6-209ENST00000538136 HNRNPKP61978 463 aaKnown RBP eCLIP7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms