RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 CLPBQ9H078 707 aa15.47■□□□□ 0.07
SFSWAP-206ENST00000537582 OR2AG1Q9H205 316 aa15.47■□□□□ 0.07
SFSWAP-206ENST00000537582 WDR26Q9H7D7 661 aa15.47■□□□□ 0.07
SFSWAP-206ENST00000537582 C11orf16Q9NQ32 467 aa15.47■□□□□ 0.07
SFSWAP-206ENST00000537582 ATXN10Q9UBB4 475 aa15.47■□□□□ 0.07
SFSWAP-206ENST00000537582 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.46■□□□□ 0.07
SFSWAP-206ENST00000537582 MSH3P20585 1137 aa15.46■□□□□ 0.07
SFSWAP-206ENST00000537582 HNRNPA2B1P22626 353 aaKnown RBP15.46■□□□□ 0.07
SFSWAP-206ENST00000537582 CNTFP26441 200 aa15.46■□□□□ 0.07
SFSWAP-206ENST00000537582 MAOBP27338 520 aa15.46■□□□□ 0.07
SFSWAP-206ENST00000537582 HOXA6P31267 233 aa15.46■□□□□ 0.07
SFSWAP-206ENST00000537582 TRIM23P36406 574 aa15.46■□□□□ 0.07
SFSWAP-206ENST00000537582 DMTNQ08495 405 aa15.46■□□□□ 0.07
SFSWAP-206ENST00000537582 USP39Q53GS9 565 aaKnown RBP15.46■□□□□ 0.07
SFSWAP-206ENST00000537582 LDLRAP1Q5SW96 308 aa15.46■□□□□ 0.07
SFSWAP-206ENST00000537582 LGSNQ5TDP6 509 aa15.46■□□□□ 0.07
SFSWAP-206ENST00000537582 AGBL2Q5U5Z8 902 aa15.46■□□□□ 0.07
SFSWAP-206ENST00000537582 PTRHD1Q6GMV3 140 aaKnown RBP15.46■□□□□ 0.07
SFSWAP-206ENST00000537582 TMEM207Q6UWW9 146 aa15.46■□□□□ 0.07
SFSWAP-206ENST00000537582 ARMCX6Q7L4S7 300 aa15.46■□□□□ 0.07
SFSWAP-206ENST00000537582 CROCCP2Q86T23 111 aa15.46■□□□□ 0.07
SFSWAP-206ENST00000537582 TMEFF1Q8IYR6 380 aa15.46■□□□□ 0.07
SFSWAP-206ENST00000537582 TMEM145Q8NBT3 493 aa15.46■□□□□ 0.07
SFSWAP-206ENST00000537582 SCG3Q8WXD2 468 aaKnown RBP15.46■□□□□ 0.07
SFSWAP-206ENST00000537582 MTBPQ96DY7 904 aa15.46■□□□□ 0.07
SFSWAP-206ENST00000537582 SPACA7Q96KW9 195 aa15.46■□□□□ 0.07
SFSWAP-206ENST00000537582 TTC1Q99614 292 aa15.46■□□□□ 0.07
SFSWAP-206ENST00000537582 C12orf65Q9H3J6 166 aaKnown RBP15.46■□□□□ 0.07
SFSWAP-206ENST00000537582 PCMTD2Q9NV79 361 aa15.46■□□□□ 0.07
SFSWAP-206ENST00000537582 VWA7Q9Y334 891 aa15.46■□□□□ 0.07
SFSWAP-206ENST00000537582 PRKAB1Q9Y478 270 aa15.46■□□□□ 0.07
SFSWAP-206ENST00000537582 METTL12A8MUP2 240 aa15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 SPAG7O75391 227 aa15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 RHOBTB1O94844 696 aa15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 ESR1P03372 595 aa15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 ATP1B2P14415 290 aaPredicted RBP15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 ZNF8P17098 575 aaPredicted RBP15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 KRT4P19013 534 aa15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 FDXRP22570 491 aa15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 RPS3P23396 243 aaKnown RBP eCLIP15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 NSG1P42857 185 aa15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 MAGEA12P43365 314 aa15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 SERPINB8P50452 374 aa15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 CSRP3P50461 194 aa15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 ADARP55265 1226 aaKnown RBP15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 TMEM115Q12893 351 aaPredicted RBP15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 ZKSCAN8Q15776 578 aaPredicted RBP15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 FAM45BPQ6NSW5 357 aa15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 LAYNQ6UX15 382 aa15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 TIFABQ6ZNK6 161 aa15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 SPATA6LQ8N4H0 392 aa15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 SIDT2Q8NBJ9 832 aaKnown RBP15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 FAM45AQ8TCE6 357 aa15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 FOXJ1Q92949 421 aa15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 ISL2Q96A47 359 aa15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 DCUN1D1Q96GG9 259 aa15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 HSPA12BQ96MM6 686 aa15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 SLC6A18Q96N87 628 aa15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 GPR21Q99679 349 aa15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 APOOQ9BUR5 198 aa15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 UNKQ9C0B0 810 aaKnown RBP15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 SARS2Q9NP81 518 aaKnown RBP15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 KCTD5Q9NXV2 234 aa15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 VPS9D1Q9Y2B5 631 aa15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 TMEM202A6NGA9 273 aa15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 FPGTO14772 594 aa15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 PFDN6O15212 129 aa15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 MAP3K13O43283 966 aa15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 TRIM16O95361 564 aa15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 ASMTLO95671 621 aa15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 FUCA1P04066 466 aa15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 C2P06681 752 aa15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 SLC35E2BP0CK96 405 aa15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 TYK2P29597 1187 aa15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 AVPR2P30518 371 aa15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 AKT2P31751 481 aa15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 PPARGP37231 505 aaPredicted RBP15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 POU4F1Q01851 419 aa15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 CRTC3Q6UUV7 619 aa15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 MACC1Q6ZN28 852 aa15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 BMP8AQ7Z5Y6 402 aa15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 WDR5BQ86VZ2 330 aa15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 DENND6BQ8NEG7 585 aa15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 VPS11Q9H270 941 aa15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 CCDC68Q9H2F9 335 aa15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 TRIM39Q9HCM9 518 aa15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 EIF2B4Q9UI10 523 aaKnown RBP15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 GNPTGQ9UJJ9 305 aa15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 TSR3Q9UJK0 312 aaKnown RBP15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 PCDHB1Q9Y5F3 818 aa15.45■□□□□ 0.06
SFSWAP-206ENST00000537582 A0A096LPK6 155 aa15.44■□□□□ 0.06
SFSWAP-206ENST00000537582 A0A1W2PPC4 97 aa15.44■□□□□ 0.06
SFSWAP-206ENST00000537582 SCAMP1O15126 338 aa15.44■□□□□ 0.06
SFSWAP-206ENST00000537582 CDK14O94921 469 aa15.44■□□□□ 0.06
SFSWAP-206ENST00000537582 WISP3O95389 354 aaPredicted RBP15.44■□□□□ 0.06
SFSWAP-206ENST00000537582 MYCLP1P12525 358 aaPredicted RBP15.44■□□□□ 0.06
SFSWAP-206ENST00000537582 STMN1P16949 149 aa15.44■□□□□ 0.06
SFSWAP-206ENST00000537582 CHRM3P20309 590 aa15.44■□□□□ 0.06
SFSWAP-206ENST00000537582 TEAD1P28347 426 aa15.44■□□□□ 0.06
SFSWAP-206ENST00000537582 HPDP32754 393 aaPredicted RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms