RNA–Protein interactions for RNA: ENST00000536393.5

USP30-208, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 5

Gene USP30, Length 476 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-208ENST00000536393 TM9SF3Q9HD45 589 aa6.61□□□□□ -1.35
USP30-208ENST00000536393 MID1IP1Q9NPA3 183 aa6.61□□□□□ -1.35
USP30-208ENST00000536393 PRDM5Q9NQX1 630 aaPredicted RBP6.61□□□□□ -1.35
USP30-208ENST00000536393 CMTM6Q9NX76 183 aa6.61□□□□□ -1.35
USP30-208ENST00000536393 SMPD4Q9NXE4 827 aa6.61□□□□□ -1.35
USP30-208ENST00000536393 SAMD4AQ9UPU9 718 aaKnown RBP6.61□□□□□ -1.35
USP30-208ENST00000536393 CORO2BQ9UQ03 480 aa6.61□□□□□ -1.35
USP30-208ENST00000536393 AURKCQ9UQB9 309 aa6.61□□□□□ -1.35
USP30-208ENST00000536393 SCML2Q9UQR0 700 aa6.61□□□□□ -1.35
USP30-208ENST00000536393 PIN4Q9Y237 131 aaKnown RBP6.61□□□□□ -1.35
USP30-208ENST00000536393 BTRCQ9Y297 605 aa6.61□□□□□ -1.35
USP30-208ENST00000536393 IPPQ9Y573 584 aa6.61□□□□□ -1.35
USP30-208ENST00000536393 GPC6Q9Y625 555 aaPredicted RBP6.61□□□□□ -1.35
USP30-208ENST00000536393 SHROOM3Q8TF72 1996 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 C2orf81A6NN90 581 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 DRGXA6NNA5 263 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 FAM220BPB1ANY3 271 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 E9PAM4 449 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 H0Y626 953 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 PLK4O00444 970 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 NR5A2O00482 541 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 INPP4BO15327 924 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 DYNC1LI2O43237 492 aaPredicted RBP6.6□□□□□ -1.35
USP30-208ENST00000536393 RGS14O43566 566 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 ATP6V1G1O75348 118 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 TRIM16O95361 564 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 ZBTB11O95625 1053 aaPredicted RBP6.6□□□□□ -1.35
USP30-208ENST00000536393 NDST3O95803 873 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 PTTG1O95997 202 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 HLA-DQB2P05538 268 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 ALDOCP09972 364 aaKnown RBP6.6□□□□□ -1.35
USP30-208ENST00000536393 TRAPPC2P0DI81 140 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 TRAPPC2BP0DI82 140 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 PRPS2P11908 318 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 COL6A1P12109 1028 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 MTHFD2P13995 350 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 CKMT2P17540 419 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 TCN1P20061 433 aaPredicted RBP6.6□□□□□ -1.35
USP30-208ENST00000536393 CAPN3P20807 821 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 RPS3P23396 243 aaKnown RBP eCLIP6.6□□□□□ -1.35
USP30-208ENST00000536393 VARSP26640 1264 aaKnown RBP6.6□□□□□ -1.35
USP30-208ENST00000536393 EEF1DP29692 281 aaKnown RBP6.6□□□□□ -1.35
USP30-208ENST00000536393 PTGER3P43115 390 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 MAPK8P45983 427 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 TMED10P49755 219 aaKnown RBP6.6□□□□□ -1.35
USP30-208ENST00000536393 RGS4P49798 205 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 ENTPD1P49961 510 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 ST13P50502 369 aaKnown RBP6.6□□□□□ -1.35
USP30-208ENST00000536393 GALK1P51570 392 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 SLC5A3P53794 718 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 CDH13P55290 713 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 C21orf58P58505 322 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 SH3BP2P78314 561 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 NKX3-2P78367 333 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 PURAQ00577 322 aaKnown RBP6.6□□□□□ -1.35
USP30-208ENST00000536393 ZNF45Q02386 682 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 LIPEQ05469 1076 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 CTBP1Q13363 440 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 PMS2P3Q13401 168 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 EIF4HQ15056 248 aaKnown RBP6.6□□□□□ -1.35
USP30-208ENST00000536393 TAF1AQ15573 450 aaPredicted RBP6.6□□□□□ -1.35
USP30-208ENST00000536393 FAM110CQ1W6H9 321 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 ZNF181Q2M3W8 571 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 C6orf141Q5SZD1 244 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 UBXN11Q5T124 520 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 GLYATQ6IB77 296 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 KIAA1841Q6NSI8 718 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 ZNF549Q6P9A3 640 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 CES3Q6UWW8 571 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 CYHR1Q6ZMK1 362 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 SAMD7Q7Z3H4 446 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 RETREG3Q86VR2 466 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 TSPYL5Q86VY4 417 aaPredicted RBP6.6□□□□□ -1.35
USP30-208ENST00000536393 DENND6AQ8IWF6 608 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 ZC3H7AQ8IWR0 971 aaKnown RBP6.6□□□□□ -1.35
USP30-208ENST00000536393 CENPSQ8N2Z9 138 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 PTGR2Q8N8N7 351 aaPredicted RBP6.6□□□□□ -1.35
USP30-208ENST00000536393 ZMIZ2Q8NF64 920 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 C9orf43Q8TAL5 461 aaPredicted RBP6.6□□□□□ -1.35
USP30-208ENST00000536393 UBTD2Q8WUN7 234 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 TRAPPC12Q8WVT3 735 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 CYGBQ8WWM9 190 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 OVCA2Q8WZ82 227 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 ABTB1Q969K4 478 aaPredicted RBP6.6□□□□□ -1.35
USP30-208ENST00000536393 ATXN7L3BQ96GX2 97 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 DNAJC1Q96KC8 554 aaKnown RBP6.6□□□□□ -1.35
USP30-208ENST00000536393 FCRL2Q96LA5 508 aaPredicted RBP6.6□□□□□ -1.35
USP30-208ENST00000536393 C8orf48Q96LL4 319 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 MGME1Q9BQP7 344 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 ZCWPW1Q9H0M4 648 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 MAGEH1Q9H213 219 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 MMP27Q9H306 513 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 SP110Q9HB58 689 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 RDH14Q9HBH5 336 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 CATSPERZQ9NTU4 200 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 NLE1Q9NVX2 485 aaPredicted RBP6.6□□□□□ -1.35
USP30-208ENST00000536393 POLR3BQ9NW08 1133 aaPredicted RBP6.6□□□□□ -1.35
USP30-208ENST00000536393 IL37Q9NZH6 218 aa6.6□□□□□ -1.35
USP30-208ENST00000536393 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.6□□□□□ -1.35
USP30-208ENST00000536393 SLC17A6Q9P2U8 582 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms