RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 GOT2P00505 430 aaKnown RBP11.16□□□□□ -0.62
TNFRSF1A-208ENST00000536194 ADRB1P08588 477 aa11.16□□□□□ -0.62
TNFRSF1A-208ENST00000536194 MLNP12872 115 aa11.16□□□□□ -0.62
TNFRSF1A-208ENST00000536194 ITGALP20701 1170 aa11.16□□□□□ -0.62
TNFRSF1A-208ENST00000536194 ACRV1P26436 265 aa11.16□□□□□ -0.62
TNFRSF1A-208ENST00000536194 MAZP56270 477 aaKnown RBP11.16□□□□□ -0.62
TNFRSF1A-208ENST00000536194 CLDN6P56747 220 aa11.16□□□□□ -0.62
TNFRSF1A-208ENST00000536194 DAB2P98082 770 aa11.16□□□□□ -0.62
TNFRSF1A-208ENST00000536194 DHX34Q14147 1143 aaKnown RBP11.16□□□□□ -0.62
TNFRSF1A-208ENST00000536194 SEMA3AQ14563 771 aa11.16□□□□□ -0.62
TNFRSF1A-208ENST00000536194 DBN1Q16643 649 aa11.16□□□□□ -0.62
TNFRSF1A-208ENST00000536194 CCDC157Q569K6 752 aa11.16□□□□□ -0.62
TNFRSF1A-208ENST00000536194 ZRANB3Q5FWF4 1079 aa11.16□□□□□ -0.62
TNFRSF1A-208ENST00000536194 PERM1Q5SV97 790 aa11.16□□□□□ -0.62
TNFRSF1A-208ENST00000536194 IZUMO3Q5VZ72 239 aa11.16□□□□□ -0.62
TNFRSF1A-208ENST00000536194 XKR5Q6UX68 686 aa11.16□□□□□ -0.62
TNFRSF1A-208ENST00000536194 SYDE1Q6ZW31 735 aaPredicted RBP11.16□□□□□ -0.62
TNFRSF1A-208ENST00000536194 DET1Q7L5Y6 550 aa11.16□□□□□ -0.62
TNFRSF1A-208ENST00000536194 LRRTM4Q86VH4 590 aa11.16□□□□□ -0.62
TNFRSF1A-208ENST00000536194 SERPINA9Q86WD7 417 aa11.16□□□□□ -0.62
TNFRSF1A-208ENST00000536194 C17orf82Q86X59 251 aaPredicted RBP11.16□□□□□ -0.62
TNFRSF1A-208ENST00000536194 NAGSQ8N159 534 aa11.16□□□□□ -0.62
TNFRSF1A-208ENST00000536194 ARL10Q8N8L6 244 aa11.16□□□□□ -0.62
TNFRSF1A-208ENST00000536194 SCG3Q8WXD2 468 aaKnown RBP11.16□□□□□ -0.62
TNFRSF1A-208ENST00000536194 ZNF592Q92610 1267 aa11.16□□□□□ -0.62
TNFRSF1A-208ENST00000536194 PEX13Q92968 403 aa11.16□□□□□ -0.62
TNFRSF1A-208ENST00000536194 ULK4Q96C45 1275 aa11.16□□□□□ -0.62
TNFRSF1A-208ENST00000536194 RUNDC3BQ96NL0 473 aa11.16□□□□□ -0.62
TNFRSF1A-208ENST00000536194 KIFC1Q9BW19 673 aa11.16□□□□□ -0.62
TNFRSF1A-208ENST00000536194 DPEP2Q9H4A9 486 aa11.16□□□□□ -0.62
TNFRSF1A-208ENST00000536194 MRM3Q9HC36 420 aaKnown RBP11.16□□□□□ -0.62
TNFRSF1A-208ENST00000536194 GULP1Q9UBP9 304 aa11.16□□□□□ -0.62
TNFRSF1A-208ENST00000536194 TBC1D29Q9UFV1 150 aa11.16□□□□□ -0.62
TNFRSF1A-208ENST00000536194 RABGEF1Q9UJ41 708 aa11.16□□□□□ -0.62
TNFRSF1A-208ENST00000536194 CDC23Q9UJX2 597 aa11.16□□□□□ -0.62
TNFRSF1A-208ENST00000536194 SOX13Q9UN79 622 aa11.16□□□□□ -0.62
TNFRSF1A-208ENST00000536194 EME2A4GXA9 379 aaPredicted RBP11.15□□□□□ -0.62
TNFRSF1A-208ENST00000536194 KMOO15229 486 aa11.15□□□□□ -0.62
TNFRSF1A-208ENST00000536194 RAD51CO43502 376 aa11.15□□□□□ -0.62
TNFRSF1A-208ENST00000536194 BANF1O75531 89 aa11.15□□□□□ -0.62
TNFRSF1A-208ENST00000536194 RFPL3O75679 317 aa11.15□□□□□ -0.62
TNFRSF1A-208ENST00000536194 SEC31AO94979 1220 aaKnown RBP11.15□□□□□ -0.62
TNFRSF1A-208ENST00000536194 ZNF7P17097 686 aaPredicted RBP11.15□□□□□ -0.62
TNFRSF1A-208ENST00000536194 MSH3P20585 1137 aa11.15□□□□□ -0.62
TNFRSF1A-208ENST00000536194 PMLP29590 882 aa11.15□□□□□ -0.62
TNFRSF1A-208ENST00000536194 AKT1P31749 480 aa11.15□□□□□ -0.62
TNFRSF1A-208ENST00000536194 RPL21P46778 160 aaKnown RBP11.15□□□□□ -0.62
TNFRSF1A-208ENST00000536194 SARNPP82979 210 aaKnown RBP11.15□□□□□ -0.62
TNFRSF1A-208ENST00000536194 CACNG1Q06432 222 aa11.15□□□□□ -0.62
TNFRSF1A-208ENST00000536194 LAMB3Q13751 1172 aa11.15□□□□□ -0.62
TNFRSF1A-208ENST00000536194 HLTFQ14527 1009 aaKnown RBP eCLIP11.15□□□□□ -0.62
TNFRSF1A-208ENST00000536194 NR0B2Q15466 257 aa11.15□□□□□ -0.62
TNFRSF1A-208ENST00000536194 GPR33Q49SQ1 333 aa11.15□□□□□ -0.62
TNFRSF1A-208ENST00000536194 MSS51Q4VC12 460 aa11.15□□□□□ -0.62
TNFRSF1A-208ENST00000536194 FNBP1LQ5T0N5 605 aa11.15□□□□□ -0.62
TNFRSF1A-208ENST00000536194 TMEM220Q6QAJ8 160 aa11.15□□□□□ -0.62
TNFRSF1A-208ENST00000536194 AFTPHQ6ULP2 937 aa11.15□□□□□ -0.62
TNFRSF1A-208ENST00000536194 DHRS13Q6UX07 377 aa11.15□□□□□ -0.62
TNFRSF1A-208ENST00000536194 NLRP9Q7RTR0 991 aa11.15□□□□□ -0.62
TNFRSF1A-208ENST00000536194 RAB44Q7Z6P3 723 aaPredicted RBP11.15□□□□□ -0.62
TNFRSF1A-208ENST00000536194 HOOK3Q86VS8 718 aa11.15□□□□□ -0.62
TNFRSF1A-208ENST00000536194 TRAPPC5Q8IUR0 188 aa11.15□□□□□ -0.62
TNFRSF1A-208ENST00000536194 CHCHD4Q8N4Q1 142 aa11.15□□□□□ -0.62
TNFRSF1A-208ENST00000536194 BEND7Q8N7W2 519 aaPredicted RBP11.15□□□□□ -0.62
TNFRSF1A-208ENST00000536194 IFI44Q8TCB0 444 aa11.15□□□□□ -0.62
TNFRSF1A-208ENST00000536194 ZDHHC1Q8WTX9 485 aa11.15□□□□□ -0.62
TNFRSF1A-208ENST00000536194 ADAMTS14Q8WXS8 1223 aa11.15□□□□□ -0.62
TNFRSF1A-208ENST00000536194 SGF29Q96ES7 293 aa11.15□□□□□ -0.62
TNFRSF1A-208ENST00000536194 SIGLEC10Q96LC7 697 aa11.15□□□□□ -0.62
TNFRSF1A-208ENST00000536194 PWWP2AQ96N64 755 aa11.15□□□□□ -0.62
TNFRSF1A-208ENST00000536194 TRIM31Q9BZY9 425 aa11.15□□□□□ -0.62
TNFRSF1A-208ENST00000536194 XAB2Q9HCS7 855 aaKnown RBP11.15□□□□□ -0.62
TNFRSF1A-208ENST00000536194 KLC4Q9NSK0 619 aa11.15□□□□□ -0.62
TNFRSF1A-208ENST00000536194 ZDHHC3Q9NYG2 299 aa11.15□□□□□ -0.62
TNFRSF1A-208ENST00000536194 MARCH4Q9P2E8 410 aaPredicted RBP11.15□□□□□ -0.62
TNFRSF1A-208ENST00000536194 PADI4Q9UM07 663 aa11.15□□□□□ -0.62
TNFRSF1A-208ENST00000536194 APOBEC2Q9Y235 224 aaKnown RBP11.15□□□□□ -0.62
TNFRSF1A-208ENST00000536194 PCDHGA1Q9Y5H4 931 aa11.15□□□□□ -0.62
TNFRSF1A-208ENST00000536194 CPED1A4D0V7 1026 aa11.14□□□□□ -0.63
TNFRSF1A-208ENST00000536194 HYAL3O43820 417 aaPredicted RBP11.14□□□□□ -0.63
TNFRSF1A-208ENST00000536194 SPINK2P20155 84 aa11.14□□□□□ -0.63
TNFRSF1A-208ENST00000536194 CLCNKAP51800 687 aa11.14□□□□□ -0.63
TNFRSF1A-208ENST00000536194 ITGA8P53708 1063 aa11.14□□□□□ -0.63
TNFRSF1A-208ENST00000536194 PRAMEP78395 509 aa11.14□□□□□ -0.63
TNFRSF1A-208ENST00000536194 FOXC1Q12948 553 aa11.14□□□□□ -0.63
TNFRSF1A-208ENST00000536194 GTF2H3Q13889 308 aa11.14□□□□□ -0.63
TNFRSF1A-208ENST00000536194 SMAD1Q15797 465 aaKnown RBP11.14□□□□□ -0.63
TNFRSF1A-208ENST00000536194 INSCQ1MX18 579 aa11.14□□□□□ -0.63
TNFRSF1A-208ENST00000536194 BCL7AQ4VC05 210 aa11.14□□□□□ -0.63
TNFRSF1A-208ENST00000536194 C14orf28Q4W4Y0 310 aa11.14□□□□□ -0.63
TNFRSF1A-208ENST00000536194 HIBCHQ6NVY1 386 aaPredicted RBP11.14□□□□□ -0.63
TNFRSF1A-208ENST00000536194 FAM83HQ6ZRV2 1179 aaPredicted RBP11.14□□□□□ -0.63
TNFRSF1A-208ENST00000536194 TAS2R42Q7RTR8 314 aa11.14□□□□□ -0.63
TNFRSF1A-208ENST00000536194 EFL1Q7Z2Z2 1120 aaKnown RBP11.14□□□□□ -0.63
TNFRSF1A-208ENST00000536194 LDB1Q86U70 411 aaPredicted RBP11.14□□□□□ -0.63
TNFRSF1A-208ENST00000536194 MARCH9Q86YJ5 346 aa11.14□□□□□ -0.63
TNFRSF1A-208ENST00000536194 OR4L1Q8NH43 312 aa11.14□□□□□ -0.63
TNFRSF1A-208ENST00000536194 SGSM3Q96HU1 749 aa11.14□□□□□ -0.63
TNFRSF1A-208ENST00000536194 TTC25Q96NG3 672 aa11.14□□□□□ -0.63
TNFRSF1A-208ENST00000536194 FCRL3Q96P31 734 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms