RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 OR5K1Q8NHB7 308 aa6.87□□□□□ -1.31
CPSF7-215ENST00000536145 SPATA22Q8NHS9 363 aa6.87□□□□□ -1.31
CPSF7-215ENST00000536145 DNAJB14Q8TBM8 379 aa6.87□□□□□ -1.31
CPSF7-215ENST00000536145 SH3RF2Q8TEC5 729 aa6.87□□□□□ -1.31
CPSF7-215ENST00000536145 TRAPPC12Q8WVT3 735 aa6.87□□□□□ -1.31
CPSF7-215ENST00000536145 VPS33AQ96AX1 596 aa6.87□□□□□ -1.31
CPSF7-215ENST00000536145 TBC1D20Q96BZ9 403 aa6.87□□□□□ -1.31
CPSF7-215ENST00000536145 RHBDF1Q96CC6 855 aa6.87□□□□□ -1.31
CPSF7-215ENST00000536145 PHF21BQ96EK2 531 aa6.87□□□□□ -1.31
CPSF7-215ENST00000536145 KIF12Q96FN5 646 aa6.87□□□□□ -1.31
CPSF7-215ENST00000536145 ZNF419Q96HQ0 510 aaPredicted RBP6.87□□□□□ -1.31
CPSF7-215ENST00000536145 EGLN2Q96KS0 407 aa6.87□□□□□ -1.31
CPSF7-215ENST00000536145 ZMAT2Q96NC0 199 aaKnown RBP6.87□□□□□ -1.31
CPSF7-215ENST00000536145 TMEM74Q96NL1 305 aa6.87□□□□□ -1.31
CPSF7-215ENST00000536145 SNX18Q96RF0 628 aa6.87□□□□□ -1.31
CPSF7-215ENST00000536145 ATOH8Q96SQ7 321 aa6.87□□□□□ -1.31
CPSF7-215ENST00000536145 C1QTNF3Q9BXJ4 246 aa6.87□□□□□ -1.31
CPSF7-215ENST00000536145 NUSAP1Q9BXS6 441 aaKnown RBP6.87□□□□□ -1.31
CPSF7-215ENST00000536145 DGCR6LQ9BY27 220 aa6.87□□□□□ -1.31
CPSF7-215ENST00000536145 PRKD2Q9BZL6 878 aa6.87□□□□□ -1.31
CPSF7-215ENST00000536145 FAM49AQ9H0Q0 323 aaPredicted RBP6.87□□□□□ -1.31
CPSF7-215ENST00000536145 GABARAPL1Q9H0R8 117 aa6.87□□□□□ -1.31
CPSF7-215ENST00000536145 ING2Q9H160 280 aa6.87□□□□□ -1.31
CPSF7-215ENST00000536145 GORASP2Q9H8Y8 452 aa6.87□□□□□ -1.31
CPSF7-215ENST00000536145 PLEKHA5Q9HAU0 1116 aa6.87□□□□□ -1.31
CPSF7-215ENST00000536145 TM9SF3Q9HD45 589 aa6.87□□□□□ -1.31
CPSF7-215ENST00000536145 ENTPD7Q9NQZ7 604 aa6.87□□□□□ -1.31
CPSF7-215ENST00000536145 CHST12Q9NRB3 414 aa6.87□□□□□ -1.31
CPSF7-215ENST00000536145 INTS7Q9NVH2 962 aaKnown RBP6.87□□□□□ -1.31
CPSF7-215ENST00000536145 FBXL12Q9NXK8 326 aa6.87□□□□□ -1.31
CPSF7-215ENST00000536145 UBP1Q9NZI7 540 aa6.87□□□□□ -1.31
CPSF7-215ENST00000536145 DNAJB9Q9UBS3 223 aa6.87□□□□□ -1.31
CPSF7-215ENST00000536145 WARS2Q9UGM6 360 aaKnown RBP6.87□□□□□ -1.31
CPSF7-215ENST00000536145 FBXO10Q9UK96 956 aa6.87□□□□□ -1.31
CPSF7-215ENST00000536145 DSEQ9UL01 958 aa6.87□□□□□ -1.31
CPSF7-215ENST00000536145 AAR2Q9Y312 384 aaKnown RBP6.87□□□□□ -1.31
CPSF7-215ENST00000536145 SNX5Q9Y5X3 404 aa6.87□□□□□ -1.31
CPSF7-215ENST00000536145 ZFC3H1O60293 1989 aaKnown RBP6.87□□□□□ -1.31
CPSF7-215ENST00000536145 DICER1Q9UPY3 1922 aaKnown RBP6.87□□□□□ -1.31
CPSF7-215ENST00000536145 ZNF236Q9UL36 1845 aa6.87□□□□□ -1.31
CPSF7-215ENST00000536145 A0A087WZ62 844 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 A0A1B0GTL3 188 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 AGAP5A6NIR3 686 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 SAGE2PA6NJ88 616 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 A6NL46 340 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 H3BMM5 538 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 EIF3FO00303 357 aaPredicted RBP6.86□□□□□ -1.31
CPSF7-215ENST00000536145 PIRO00625 290 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 WNT10BO00744 389 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 PRMT5O14744 637 aaPredicted RBP6.86□□□□□ -1.31
CPSF7-215ENST00000536145 KLK8O60259 260 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 TBC1D4O60343 1298 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 ANXA9O76027 345 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 CNTN5O94779 1100 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 LRIG2O94898 1065 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 ALX3O95076 343 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 SNX4O95219 450 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 PAPSS2O95340 614 aaPredicted RBP6.86□□□□□ -1.31
CPSF7-215ENST00000536145 SEC24AO95486 1093 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 S1PR4O95977 384 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 MT-ND2P03891 347 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 CYBBP04839 570 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 GSNP06396 782 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 RPS17P08708 135 aaKnown RBP6.86□□□□□ -1.31
CPSF7-215ENST00000536145 MMP10P09238 476 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 CHRNB1P11230 501 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 HOXD8P13378 290 aaPredicted RBP6.86□□□□□ -1.31
CPSF7-215ENST00000536145 HGFP14210 728 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 PRKCAP17252 672 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 IL1RNP18510 177 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 PAMP19021 973 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 EFNA1P20827 205 aaPredicted RBP6.86□□□□□ -1.31
CPSF7-215ENST00000536145 PAX3P23760 479 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 FSHRP23945 695 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 CCNCP24863 283 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 LMO2P25791 158 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 DCTP40126 519 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 ETV6P41212 452 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 MTHFRP42898 656 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 MAP2K4P45985 399 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 CXCR3P49682 368 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 NKX2-5P52952 324 aaPredicted RBP6.86□□□□□ -1.31
CPSF7-215ENST00000536145 SLC12A2P55011 1212 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 DIO3P55073 304 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 CDH13P55290 713 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 FCGRTP55899 365 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 UFM1P61960 85 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 NCS1P62166 190 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 IGBP1P78318 339 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 MVKQ03426 396 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 C19orf57Q0VDD7 668 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 ADIGQ0VDE8 80 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 SLC13A2Q13183 592 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 GBX1Q14549 363 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 POU6F1Q14863 301 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 NOL9Q5SY16 702 aaKnown RBP6.86□□□□□ -1.31
CPSF7-215ENST00000536145 CELF3Q5SZQ8 465 aaKnown RBP6.86□□□□□ -1.31
CPSF7-215ENST00000536145 AFMIDQ63HM1 303 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 STEAP3Q658P3 488 aa6.86□□□□□ -1.31
CPSF7-215ENST00000536145 PPP2R2DQ66LE6 453 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms