RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 DPEP2Q9H4A9 486 aa17.64■□□□□ 0.41
DDX55-204ENST00000536079 BFARQ9NZS9 450 aa17.64■□□□□ 0.41
DDX55-204ENST00000536079 TBC1D29Q9UFV1 150 aa17.64■□□□□ 0.41
DDX55-204ENST00000536079 RABGEF1Q9UJ41 708 aa17.64■□□□□ 0.41
DDX55-204ENST00000536079 CRLS1Q9UJA2 301 aa17.64■□□□□ 0.41
DDX55-204ENST00000536079 CDC23Q9UJX2 597 aa17.64■□□□□ 0.41
DDX55-204ENST00000536079 RIMKLBQ9ULI2 386 aa17.64■□□□□ 0.41
DDX55-204ENST00000536079 SLC30A1Q9Y6M5 507 aa17.64■□□□□ 0.41
DDX55-204ENST00000536079 TRBV23OR9-2A0A075B6M9 112 aa17.63■□□□□ 0.41
DDX55-204ENST00000536079 CPED1A4D0V7 1026 aa17.63■□□□□ 0.41
DDX55-204ENST00000536079 RAD51CO43502 376 aa17.63■□□□□ 0.41
DDX55-204ENST00000536079 BANF1O75531 89 aa17.63■□□□□ 0.41
DDX55-204ENST00000536079 URI1O94763 535 aaPredicted RBP17.63■□□□□ 0.41
DDX55-204ENST00000536079 ADRB1P08588 477 aa17.63■□□□□ 0.41
DDX55-204ENST00000536079 ITGALP20701 1170 aa17.63■□□□□ 0.41
DDX55-204ENST00000536079 ACRV1P26436 265 aa17.63■□□□□ 0.41
DDX55-204ENST00000536079 ARNTP27540 789 aa17.63■□□□□ 0.41
DDX55-204ENST00000536079 CACNG1Q06432 222 aa17.63■□□□□ 0.41
DDX55-204ENST00000536079 FOXC1Q12948 553 aa17.63■□□□□ 0.41
DDX55-204ENST00000536079 NR0B2Q15466 257 aa17.63■□□□□ 0.41
DDX55-204ENST00000536079 DBN1Q16643 649 aa17.63■□□□□ 0.41
DDX55-204ENST00000536079 MSS51Q4VC12 460 aa17.63■□□□□ 0.41
DDX55-204ENST00000536079 FNBP1LQ5T0N5 605 aa17.63■□□□□ 0.41
DDX55-204ENST00000536079 TMEM220Q6QAJ8 160 aa17.63■□□□□ 0.41
DDX55-204ENST00000536079 DHRS13Q6UX07 377 aa17.63■□□□□ 0.41
DDX55-204ENST00000536079 TAS2R42Q7RTR8 314 aa17.63■□□□□ 0.41
DDX55-204ENST00000536079 ERMP1Q7Z2K6 904 aa17.63■□□□□ 0.41
DDX55-204ENST00000536079 EFL1Q7Z2Z2 1120 aaKnown RBP17.63■□□□□ 0.41
DDX55-204ENST00000536079 ZNF572Q7Z3I7 529 aaPredicted RBP17.63■□□□□ 0.41
DDX55-204ENST00000536079 LRRTM4Q86VH4 590 aa17.63■□□□□ 0.41
DDX55-204ENST00000536079 NAGSQ8N159 534 aa17.63■□□□□ 0.41
DDX55-204ENST00000536079 SDR16C5Q8N3Y7 309 aa17.63■□□□□ 0.41
DDX55-204ENST00000536079 ARL10Q8N8L6 244 aa17.63■□□□□ 0.41
DDX55-204ENST00000536079 ZDHHC1Q8WTX9 485 aa17.63■□□□□ 0.41
DDX55-204ENST00000536079 FCRL3Q96P31 734 aaPredicted RBP17.63■□□□□ 0.41
DDX55-204ENST00000536079 TRIM31Q9BZY9 425 aa17.63■□□□□ 0.41
DDX55-204ENST00000536079 IL22Q9GZX6 179 aa17.63■□□□□ 0.41
DDX55-204ENST00000536079 KLC4Q9NSK0 619 aa17.63■□□□□ 0.41
DDX55-204ENST00000536079 MARCH4Q9P2E8 410 aaPredicted RBP17.63■□□□□ 0.41
DDX55-204ENST00000536079 PADI4Q9UM07 663 aa17.63■□□□□ 0.41
DDX55-204ENST00000536079 SOX13Q9UN79 622 aa17.63■□□□□ 0.41
DDX55-204ENST00000536079 DNAJC16Q9Y2G8 782 aa17.63■□□□□ 0.41
DDX55-204ENST00000536079 PRSS21Q9Y6M0 314 aa17.63■□□□□ 0.41
DDX55-204ENST00000536079 IGLV3-16A0A075B6K0 115 aa17.62■□□□□ 0.41
DDX55-204ENST00000536079 EME2A4GXA9 379 aaPredicted RBP17.62■□□□□ 0.41
DDX55-204ENST00000536079 A6NCN8 305 aa17.62■□□□□ 0.41
DDX55-204ENST00000536079 GPR89AB7ZAQ6 455 aa17.62■□□□□ 0.41
DDX55-204ENST00000536079 HYAL3O43820 417 aaPredicted RBP17.62■□□□□ 0.41
DDX55-204ENST00000536079 RFPL3O75679 317 aa17.62■□□□□ 0.41
DDX55-204ENST00000536079 GPR89BP0CG08 455 aa17.62■□□□□ 0.41
DDX55-204ENST00000536079 ZNF7P17097 686 aaPredicted RBP17.62■□□□□ 0.41
DDX55-204ENST00000536079 MSH3P20585 1137 aa17.62■□□□□ 0.41
DDX55-204ENST00000536079 PMLP29590 882 aa17.62■□□□□ 0.41
DDX55-204ENST00000536079 AKT1P31749 480 aa17.62■□□□□ 0.41
DDX55-204ENST00000536079 HLTFQ14527 1009 aaKnown RBP eCLIP17.62■□□□□ 0.41
DDX55-204ENST00000536079 FAM83HQ6ZRV2 1179 aaPredicted RBP17.62■□□□□ 0.41
DDX55-204ENST00000536079 SYDE1Q6ZW31 735 aaPredicted RBP17.62■□□□□ 0.41
DDX55-204ENST00000536079 RAB44Q7Z6P3 723 aaPredicted RBP17.62■□□□□ 0.41
DDX55-204ENST00000536079 LDB1Q86U70 411 aaPredicted RBP17.62■□□□□ 0.41
DDX55-204ENST00000536079 C17orf82Q86X59 251 aaPredicted RBP17.62■□□□□ 0.41
DDX55-204ENST00000536079 TRAPPC5Q8IUR0 188 aa17.62■□□□□ 0.41
DDX55-204ENST00000536079 IFI44Q8TCB0 444 aa17.62■□□□□ 0.41
DDX55-204ENST00000536079 SCG3Q8WXD2 468 aaKnown RBP17.62■□□□□ 0.41
DDX55-204ENST00000536079 ADAMTS14Q8WXS8 1223 aa17.62■□□□□ 0.41
DDX55-204ENST00000536079 ULK4Q96C45 1275 aa17.62■□□□□ 0.41
DDX55-204ENST00000536079 SIGLEC10Q96LC7 697 aa17.62■□□□□ 0.41
DDX55-204ENST00000536079 RUNDC3BQ96NL0 473 aa17.62■□□□□ 0.41
DDX55-204ENST00000536079 PRDM8Q9NQV8 689 aa17.62■□□□□ 0.41
DDX55-204ENST00000536079 SCHIP1Q9P0W5 487 aaPredicted RBP17.62■□□□□ 0.41
DDX55-204ENST00000536079 KMOO15229 486 aa17.61■□□□□ 0.41
DDX55-204ENST00000536079 SNX2O60749 519 aa17.61■□□□□ 0.41
DDX55-204ENST00000536079 POP7O75817 140 aaKnown RBP17.61■□□□□ 0.41
DDX55-204ENST00000536079 MLNP12872 115 aa17.61■□□□□ 0.41
DDX55-204ENST00000536079 RPL21P46778 160 aaKnown RBP17.61■□□□□ 0.41
DDX55-204ENST00000536079 LRP8Q14114 963 aa17.61■□□□□ 0.41
DDX55-204ENST00000536079 DHX34Q14147 1143 aaKnown RBP17.61■□□□□ 0.41
DDX55-204ENST00000536079 GPR33Q49SQ1 333 aa17.61■□□□□ 0.41
DDX55-204ENST00000536079 HIBCHQ6NVY1 386 aaPredicted RBP17.61■□□□□ 0.41
DDX55-204ENST00000536079 NLRP9Q7RTR0 991 aa17.61■□□□□ 0.41
DDX55-204ENST00000536079 OR6P1Q8NGX9 317 aa17.61■□□□□ 0.41
DDX55-204ENST00000536079 COPS8Q99627 209 aa17.61■□□□□ 0.41
DDX55-204ENST00000536079 MRM3Q9HC36 420 aaKnown RBP17.61■□□□□ 0.41
DDX55-204ENST00000536079 ZDHHC3Q9NYG2 299 aa17.61■□□□□ 0.41
DDX55-204ENST00000536079 IL1RAPL1Q9NZN1 696 aa17.61■□□□□ 0.41
DDX55-204ENST00000536079 APOBEC2Q9Y235 224 aaKnown RBP17.61■□□□□ 0.41
DDX55-204ENST00000536079 SNX24Q9Y343 169 aa17.61■□□□□ 0.41
DDX55-204ENST00000536079 PCDHGA1Q9Y5H4 931 aa17.61■□□□□ 0.41
DDX55-204ENST00000536079 RNF215Q9Y6U7 377 aa17.61■□□□□ 0.41
DDX55-204ENST00000536079 SDR42E2A6NKP2 422 aa17.6■□□□□ 0.41
DDX55-204ENST00000536079 GOLGA8KD6RF30 607 aa17.6■□□□□ 0.41
DDX55-204ENST00000536079 GOLGA8TH3BQL2 631 aa17.6■□□□□ 0.41
DDX55-204ENST00000536079 OR1I1O60431 355 aa17.6■□□□□ 0.41
DDX55-204ENST00000536079 F7P08709 466 aaPredicted RBP17.6■□□□□ 0.41
DDX55-204ENST00000536079 PBLDP30039 288 aaPredicted RBP17.6■□□□□ 0.41
DDX55-204ENST00000536079 ARCN1P48444 511 aaKnown RBP17.6■□□□□ 0.41
DDX55-204ENST00000536079 ITGA8P53708 1063 aa17.6■□□□□ 0.41
DDX55-204ENST00000536079 SARNPP82979 210 aaKnown RBP17.6■□□□□ 0.41
DDX55-204ENST00000536079 LAMB3Q13751 1172 aa17.6■□□□□ 0.41
DDX55-204ENST00000536079 GTF2H3Q13889 308 aa17.6■□□□□ 0.41
DDX55-204ENST00000536079 TRADDQ15628 312 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms