RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 TRIM38O00635 465 aa11.91□□□□□ -0.5
CHD4-203ENST00000535717 YY2O15391 372 aa11.91□□□□□ -0.5
CHD4-203ENST00000535717 GRID2O43424 1007 aa11.91□□□□□ -0.5
CHD4-203ENST00000535717 CBFA2T3O75081 653 aa11.91□□□□□ -0.5
CHD4-203ENST00000535717 VAPBO95292 243 aa11.91□□□□□ -0.5
CHD4-203ENST00000535717 UQCRHP07919 91 aa11.91□□□□□ -0.5
CHD4-203ENST00000535717 GPR89BP0CG08 455 aa11.91□□□□□ -0.5
CHD4-203ENST00000535717 MSH3P20585 1137 aa11.91□□□□□ -0.5
CHD4-203ENST00000535717 ACRV1P26436 265 aa11.91□□□□□ -0.5
CHD4-203ENST00000535717 AKT1P31749 480 aa11.91□□□□□ -0.5
CHD4-203ENST00000535717 ARCN1P48444 511 aaKnown RBP11.91□□□□□ -0.5
CHD4-203ENST00000535717 CTSCP53634 463 aa11.91□□□□□ -0.5
CHD4-203ENST00000535717 PLTPP55058 493 aa11.91□□□□□ -0.5
CHD4-203ENST00000535717 CTBSQ01459 385 aa11.91□□□□□ -0.5
CHD4-203ENST00000535717 GUCY2DQ02846 1103 aa11.91□□□□□ -0.5
CHD4-203ENST00000535717 CBLBQ13191 982 aa11.91□□□□□ -0.5
CHD4-203ENST00000535717 SEMA3AQ14563 771 aa11.91□□□□□ -0.5
CHD4-203ENST00000535717 DBN1Q16643 649 aa11.91□□□□□ -0.5
CHD4-203ENST00000535717 DEFB133Q30KQ1 61 aa11.91□□□□□ -0.5
CHD4-203ENST00000535717 INAVAQ3KP66 663 aa11.91□□□□□ -0.5
CHD4-203ENST00000535717 GLE1Q53GS7 698 aaKnown RBP11.91□□□□□ -0.5
CHD4-203ENST00000535717 HP1BP3Q5SSJ5 553 aaPredicted RBP11.91□□□□□ -0.5
CHD4-203ENST00000535717 KIAA0930Q6ICG6 404 aaPredicted RBP11.91□□□□□ -0.5
CHD4-203ENST00000535717 ZDHHC24Q6UX98 284 aa11.91□□□□□ -0.5
CHD4-203ENST00000535717 NRROSQ86YC3 692 aa11.91□□□□□ -0.5
CHD4-203ENST00000535717 ZNF547Q8IVP9 402 aa11.91□□□□□ -0.5
CHD4-203ENST00000535717 OR4C6Q8NH72 309 aa11.91□□□□□ -0.5
CHD4-203ENST00000535717 GPBAR1Q8TDU6 330 aa11.91□□□□□ -0.5
CHD4-203ENST00000535717 NAT14Q8WUY8 206 aa11.91□□□□□ -0.5
CHD4-203ENST00000535717 ZNF669Q96BR6 464 aaPredicted RBP11.91□□□□□ -0.5
CHD4-203ENST00000535717 TTC25Q96NG3 672 aa11.91□□□□□ -0.5
CHD4-203ENST00000535717 COPS8Q99627 209 aa11.91□□□□□ -0.5
CHD4-203ENST00000535717 EBNA1BP2Q99848 306 aaKnown RBP11.91□□□□□ -0.5
CHD4-203ENST00000535717 WDR83Q9BRX9 315 aaKnown RBP11.91□□□□□ -0.5
CHD4-203ENST00000535717 BOCQ9BWV1 1114 aa11.91□□□□□ -0.5
CHD4-203ENST00000535717 ZCCHC2Q9C0B9 1178 aaKnown RBP11.91□□□□□ -0.5
CHD4-203ENST00000535717 CATSPERZQ9NTU4 200 aa11.91□□□□□ -0.5
CHD4-203ENST00000535717 ZDHHC3Q9NYG2 299 aa11.91□□□□□ -0.5
CHD4-203ENST00000535717 MARCH4Q9P2E8 410 aaPredicted RBP11.91□□□□□ -0.5
CHD4-203ENST00000535717 PCOLCE2Q9UKZ9 415 aa11.91□□□□□ -0.5
CHD4-203ENST00000535717 TEX264Q9Y6I9 313 aa11.91□□□□□ -0.5
CHD4-203ENST00000535717 RPS6KL1Q9Y6S9 549 aa11.91□□□□□ -0.5
CHD4-203ENST00000535717 CNOT1A5YKK6 2376 aaKnown RBP11.91□□□□□ -0.5
CHD4-203ENST00000535717 GOLGA8KD6RF30 607 aa11.9□□□□□ -0.5
CHD4-203ENST00000535717 E7ESA3 106 aa11.9□□□□□ -0.5
CHD4-203ENST00000535717 GOLGA8TH3BQL2 631 aa11.9□□□□□ -0.5
CHD4-203ENST00000535717 CD3EAPO15446 510 aaKnown RBP11.9□□□□□ -0.5
CHD4-203ENST00000535717 SIGLEC6O43699 453 aa11.9□□□□□ -0.5
CHD4-203ENST00000535717 SGTAO43765 313 aa11.9□□□□□ -0.5
CHD4-203ENST00000535717 USP1O94782 785 aa11.9□□□□□ -0.5
CHD4-203ENST00000535717 POLBP06746 335 aa11.9□□□□□ -0.5
CHD4-203ENST00000535717 ANXA6P08133 673 aa11.9□□□□□ -0.5
CHD4-203ENST00000535717 PGAM1P18669 254 aa11.9□□□□□ -0.5
CHD4-203ENST00000535717 PAMP19021 973 aa11.9□□□□□ -0.5
CHD4-203ENST00000535717 SDHBP21912 280 aa11.9□□□□□ -0.5
CHD4-203ENST00000535717 AK4P27144 223 aaPredicted RBP11.9□□□□□ -0.5
CHD4-203ENST00000535717 ELK3P41970 407 aa11.9□□□□□ -0.5
CHD4-203ENST00000535717 CAV1Q03135 178 aa11.9□□□□□ -0.5
CHD4-203ENST00000535717 ILF3Q12906 894 aaKnown RBP eCLIP11.9□□□□□ -0.5
CHD4-203ENST00000535717 PDIA2Q13087 525 aaKnown RBP11.9□□□□□ -0.5
CHD4-203ENST00000535717 GTF2H3Q13889 308 aa11.9□□□□□ -0.5
CHD4-203ENST00000535717 SMAD1Q15797 465 aaKnown RBP11.9□□□□□ -0.5
CHD4-203ENST00000535717 FASTKD1Q53R41 847 aaKnown RBP11.9□□□□□ -0.5
CHD4-203ENST00000535717 CRTC3Q6UUV7 619 aa11.9□□□□□ -0.5
CHD4-203ENST00000535717 DET1Q7L5Y6 550 aa11.9□□□□□ -0.5
CHD4-203ENST00000535717 CHST15Q7LFX5 561 aaPredicted RBP11.9□□□□□ -0.5
CHD4-203ENST00000535717 TAF8Q7Z7C8 310 aa11.9□□□□□ -0.5
CHD4-203ENST00000535717 LDB1Q86U70 411 aaPredicted RBP11.9□□□□□ -0.5
CHD4-203ENST00000535717 LRRTM4Q86VH4 590 aa11.9□□□□□ -0.5
CHD4-203ENST00000535717 GKN2Q86XP6 184 aa11.9□□□□□ -0.5
CHD4-203ENST00000535717 TRAPPC5Q8IUR0 188 aa11.9□□□□□ -0.5
CHD4-203ENST00000535717 SDR16C5Q8N3Y7 309 aa11.9□□□□□ -0.5
CHD4-203ENST00000535717 DEFB124Q8NES8 71 aa11.9□□□□□ -0.5
CHD4-203ENST00000535717 BAHD1Q8TBE0 780 aaPredicted RBP11.9□□□□□ -0.5
CHD4-203ENST00000535717 FBXO25Q8TCJ0 367 aa11.9□□□□□ -0.5
CHD4-203ENST00000535717 RHBDD1Q8TEB9 315 aa11.9□□□□□ -0.5
CHD4-203ENST00000535717 HEXDCQ8WVB3 486 aa11.9□□□□□ -0.5
CHD4-203ENST00000535717 LRRC39Q96DD0 335 aa11.9□□□□□ -0.5
CHD4-203ENST00000535717 SGF29Q96ES7 293 aa11.9□□□□□ -0.5
CHD4-203ENST00000535717 DCUN1D1Q96GG9 259 aa11.9□□□□□ -0.5
CHD4-203ENST00000535717 GSDMCQ9BYG8 508 aa11.9□□□□□ -0.5
CHD4-203ENST00000535717 PLAC1Q9HBJ0 212 aa11.9□□□□□ -0.5
CHD4-203ENST00000535717 EPB41L5Q9HCM4 733 aa11.9□□□□□ -0.5
CHD4-203ENST00000535717 DLL3Q9NYJ7 618 aa11.9□□□□□ -0.5
CHD4-203ENST00000535717 NLGN3Q9NZ94 848 aa11.9□□□□□ -0.5
CHD4-203ENST00000535717 IL1RAPL1Q9NZN1 696 aa11.9□□□□□ -0.5
CHD4-203ENST00000535717 SLC23A2Q9UGH3 650 aa11.9□□□□□ -0.5
CHD4-203ENST00000535717 CHMP2BQ9UQN3 213 aa11.9□□□□□ -0.5
CHD4-203ENST00000535717 DCHS1Q96JQ0 3298 aa11.89□□□□□ -0.51
CHD4-203ENST00000535717 OR2AG2A6NM03 316 aa11.89□□□□□ -0.51
CHD4-203ENST00000535717 TPP1O14773 563 aa11.89□□□□□ -0.51
CHD4-203ENST00000535717 KMOO15229 486 aa11.89□□□□□ -0.51
CHD4-203ENST00000535717 ALPPL2P10696 532 aa11.89□□□□□ -0.51
CHD4-203ENST00000535717 RALBP11234 206 aa11.89□□□□□ -0.51
CHD4-203ENST00000535717 ACP5P13686 325 aa11.89□□□□□ -0.51
CHD4-203ENST00000535717 ATP1B2P14415 290 aaPredicted RBP11.89□□□□□ -0.51
CHD4-203ENST00000535717 ZNF7P17097 686 aaPredicted RBP11.89□□□□□ -0.51
CHD4-203ENST00000535717 CSRP1P21291 193 aaKnown RBP11.89□□□□□ -0.51
CHD4-203ENST00000535717 LRP8Q14114 963 aa11.89□□□□□ -0.51
CHD4-203ENST00000535717 CRYMQ14894 314 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms