RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 CFAP52Q8N1V2 620 aa8.97□□□□□ -0.97
SF3B2-216ENST00000534765 FBXO22Q8NEZ5 403 aa8.97□□□□□ -0.97
SF3B2-216ENST00000534765 HTR3CQ8WXA8 447 aa8.97□□□□□ -0.97
SF3B2-216ENST00000534765 CEP19Q96LK0 163 aa8.97□□□□□ -0.97
SF3B2-216ENST00000534765 UROC1Q96N76 676 aa8.97□□□□□ -0.97
SF3B2-216ENST00000534765 TDRD1Q9BXT4 1180 aaKnown RBP8.97□□□□□ -0.97
SF3B2-216ENST00000534765 SLC39A8Q9C0K1 460 aa8.97□□□□□ -0.97
SF3B2-216ENST00000534765 WDR41Q9HAD4 459 aa8.97□□□□□ -0.97
SF3B2-216ENST00000534765 RNF11Q9Y3C5 154 aa8.97□□□□□ -0.97
SF3B2-216ENST00000534765 CENPBD1B2RD01 187 aa8.97□□□□□ -0.97
SF3B2-216ENST00000534765 J3KR12 359 aa8.97□□□□□ -0.97
SF3B2-216ENST00000534765 NUPL2O15504 423 aaKnown RBP8.97□□□□□ -0.97
SF3B2-216ENST00000534765 NOS1APO75052 506 aaPredicted RBP8.97□□□□□ -0.97
SF3B2-216ENST00000534765 CLASP2O75122 1294 aaKnown RBP8.97□□□□□ -0.97
SF3B2-216ENST00000534765 MYOGP15173 224 aa8.97□□□□□ -0.97
SF3B2-216ENST00000534765 UQCRC1P31930 480 aa8.97□□□□□ -0.97
SF3B2-216ENST00000534765 IDUAP35475 653 aa8.97□□□□□ -0.97
SF3B2-216ENST00000534765 EFEMP1Q12805 493 aa8.97□□□□□ -0.97
SF3B2-216ENST00000534765 MGAT5BQ3V5L5 792 aa8.97□□□□□ -0.97
SF3B2-216ENST00000534765 ZFP1Q6P2D0 407 aa8.97□□□□□ -0.97
SF3B2-216ENST00000534765 HORMAD1Q86X24 394 aa8.97□□□□□ -0.97
SF3B2-216ENST00000534765 ZNF276Q8N554 614 aa8.97□□□□□ -0.97
SF3B2-216ENST00000534765 OR7A2PQ8NGA2 310 aa8.97□□□□□ -0.97
SF3B2-216ENST00000534765 PIWIL2Q8TC59 973 aaKnown RBP8.97□□□□□ -0.97
SF3B2-216ENST00000534765 SH3RF2Q8TEC5 729 aa8.97□□□□□ -0.97
SF3B2-216ENST00000534765 TOP1MTQ969P6 601 aa8.97□□□□□ -0.97
SF3B2-216ENST00000534765 NPAS2Q99743 824 aa8.97□□□□□ -0.97
SF3B2-216ENST00000534765 DHRS4Q9BTZ2 278 aa8.97□□□□□ -0.97
SF3B2-216ENST00000534765 WDR55Q9H6Y2 383 aaPredicted RBP8.97□□□□□ -0.97
SF3B2-216ENST00000534765 ELAC1Q9H777 363 aaKnown RBP8.97□□□□□ -0.97
SF3B2-216ENST00000534765 PRDM5Q9NQX1 630 aaPredicted RBP8.97□□□□□ -0.97
SF3B2-216ENST00000534765 MTRRQ9UBK8 725 aa8.97□□□□□ -0.97
SF3B2-216ENST00000534765 VANGL2Q9ULK5 521 aa8.97□□□□□ -0.97
SF3B2-216ENST00000534765 FAM92AA1XBS5 289 aa8.97□□□□□ -0.97
SF3B2-216ENST00000534765 M0QX08 132 aa8.97□□□□□ -0.97
SF3B2-216ENST00000534765 SNRPAP09012 282 aaKnown RBP8.97□□□□□ -0.97
SF3B2-216ENST00000534765 ITGALP20701 1170 aa8.97□□□□□ -0.97
SF3B2-216ENST00000534765 GLDCP23378 1020 aa8.97□□□□□ -0.97
SF3B2-216ENST00000534765 CLK1P49759 484 aaKnown RBP8.97□□□□□ -0.97
SF3B2-216ENST00000534765 WDR5P61964 334 aaKnown RBP8.97□□□□□ -0.97
SF3B2-216ENST00000534765 STXBP5Q5T5C0 1151 aa8.97□□□□□ -0.97
SF3B2-216ENST00000534765 FAM109BQ6ICB4 259 aaPredicted RBP8.97□□□□□ -0.97
SF3B2-216ENST00000534765 BORAQ6PGQ7 559 aa8.97□□□□□ -0.97
SF3B2-216ENST00000534765 FKBP9P1Q75LS8 142 aa8.97□□□□□ -0.97
SF3B2-216ENST00000534765 KDELC2Q7Z4H8 507 aa8.97□□□□□ -0.97
SF3B2-216ENST00000534765 HERC6Q8IVU3 1022 aa8.97□□□□□ -0.97
SF3B2-216ENST00000534765 BANPQ8N9N5 519 aa8.97□□□□□ -0.97
SF3B2-216ENST00000534765 SNX31Q8N9S9 440 aa8.97□□□□□ -0.97
SF3B2-216ENST00000534765 COLGALT1Q8NBJ5 622 aa8.97□□□□□ -0.97
SF3B2-216ENST00000534765 CCNYQ8ND76 341 aa8.97□□□□□ -0.97
SF3B2-216ENST00000534765 ACMSDQ8TDX5 336 aa8.97□□□□□ -0.97
SF3B2-216ENST00000534765 TRPC4APQ8TEL6 797 aa8.97□□□□□ -0.97
SF3B2-216ENST00000534765 PBXIP1Q96AQ6 731 aa8.97□□□□□ -0.97
SF3B2-216ENST00000534765 SCYL1Q96KG9 808 aa8.97□□□□□ -0.97
SF3B2-216ENST00000534765 WDR12Q9GZL7 423 aaKnown RBP8.97□□□□□ -0.97
SF3B2-216ENST00000534765 CRNNQ9UBG3 495 aaPredicted RBP8.97□□□□□ -0.97
SF3B2-216ENST00000534765 MIA3Q5JRA6 1907 aa8.97□□□□□ -0.97
SF3B2-216ENST00000534765 PRRC2BQ5JSZ5 2229 aaKnown RBP8.96□□□□□ -0.97
SF3B2-216ENST00000534765 TYW5A2RUC4 315 aaKnown RBP8.96□□□□□ -0.97
SF3B2-216ENST00000534765 C7orf72A4D263 438 aa8.96□□□□□ -0.97
SF3B2-216ENST00000534765 MUSKO15146 869 aa8.96□□□□□ -0.97
SF3B2-216ENST00000534765 GPC4O75487 556 aa8.96□□□□□ -0.97
SF3B2-216ENST00000534765 GCATO75600 419 aa8.96□□□□□ -0.97
SF3B2-216ENST00000534765 TPH1P17752 444 aa8.96□□□□□ -0.97
SF3B2-216ENST00000534765 ENPP1P22413 925 aa8.96□□□□□ -0.97
SF3B2-216ENST00000534765 CXCR2P25025 360 aa8.96□□□□□ -0.97
SF3B2-216ENST00000534765 PRDX6P30041 224 aa8.96□□□□□ -0.97
SF3B2-216ENST00000534765 IL12RB1P42701 662 aa8.96□□□□□ -0.97
SF3B2-216ENST00000534765 PIGFQ07326 219 aa8.96□□□□□ -0.97
SF3B2-216ENST00000534765 APOFQ13790 326 aa8.96□□□□□ -0.97
SF3B2-216ENST00000534765 MS4A13Q5J8X5 152 aa8.96□□□□□ -0.97
SF3B2-216ENST00000534765 UNC5AQ6ZN44 842 aa8.96□□□□□ -0.97
SF3B2-216ENST00000534765 METTL23Q86XA0 190 aa8.96□□□□□ -0.97
SF3B2-216ENST00000534765 ABHD11Q8NFV4 315 aa8.96□□□□□ -0.97
SF3B2-216ENST00000534765 MOCOSQ96EN8 888 aa8.96□□□□□ -0.97
SF3B2-216ENST00000534765 IGSF21Q96ID5 467 aa8.96□□□□□ -0.97
SF3B2-216ENST00000534765 SLC29A1Q99808 456 aa8.96□□□□□ -0.97
SF3B2-216ENST00000534765 FTHL17Q9BXU8 183 aa8.96□□□□□ -0.97
SF3B2-216ENST00000534765 SMOC2Q9H3U7 446 aa8.96□□□□□ -0.97
SF3B2-216ENST00000534765 IARS2Q9NSE4 1012 aaKnown RBP8.96□□□□□ -0.97
SF3B2-216ENST00000534765 MRPL39Q9NYK5 338 aaKnown RBP8.96□□□□□ -0.97
SF3B2-216ENST00000534765 SHOC2Q9UQ13 582 aa8.96□□□□□ -0.97
SF3B2-216ENST00000534765 TBC1D30Q9Y2I9 924 aa8.96□□□□□ -0.97
SF3B2-216ENST00000534765 TRAF6Q9Y4K3 522 aa8.96□□□□□ -0.97
SF3B2-216ENST00000534765 NRP2O60462 931 aa8.96□□□□□ -0.98
SF3B2-216ENST00000534765 MAFKO60675 156 aa8.96□□□□□ -0.98
SF3B2-216ENST00000534765 XYLBO75191 536 aa8.96□□□□□ -0.98
SF3B2-216ENST00000534765 SULT1C4O75897 302 aa8.96□□□□□ -0.98
SF3B2-216ENST00000534765 FOSL1P15407 271 aa8.96□□□□□ -0.98
SF3B2-216ENST00000534765 PSMB9P28065 219 aa8.96□□□□□ -0.98
SF3B2-216ENST00000534765 RPS3AP61247 264 aaKnown RBP8.96□□□□□ -0.98
SF3B2-216ENST00000534765 SNRPD2P62316 118 aaKnown RBP8.96□□□□□ -0.98
SF3B2-216ENST00000534765 ZMYND11Q15326 602 aa8.96□□□□□ -0.98
SF3B2-216ENST00000534765 TBCELQ5QJ74 424 aa8.96□□□□□ -0.98
SF3B2-216ENST00000534765 SPATC1Q76KD6 591 aa8.96□□□□□ -0.98
SF3B2-216ENST00000534765 DSELQ8IZU8 1212 aa8.96□□□□□ -0.98
SF3B2-216ENST00000534765 PGBD5Q8N414 524 aa8.96□□□□□ -0.98
SF3B2-216ENST00000534765 URGCPQ8TCY9 931 aa8.96□□□□□ -0.98
SF3B2-216ENST00000534765 FAR1Q8WVX9 515 aa8.96□□□□□ -0.98
SF3B2-216ENST00000534765 ST8SIA2Q92186 375 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms