RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	CCDC188	H7C350	402 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	NDC80	O14777	642 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	TXNL1	O43396	289 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	SLC28A2	O43868	658 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	PRPSAP2	O60256	369 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	NEURL1	O76050	574 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	GCNT3	O95395	438 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	ADA	P00813	363 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	HEXA	P06865	529 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	KRT10	P13645	584 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	TMEM11	P17152	192 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	HOXB9	P17482	250 aa	Predicted RBP	4.68	□□□□□ -1.66
ATM-223	ENST00000533979	SP100	P23497	879 aa	Predicted RBP	4.68	□□□□□ -1.66
ATM-223	ENST00000533979	GSTM2	P28161	218 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	CHRNA5	P30532	468 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	CDA	P32320	146 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	PTPN9	P43378	593 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	GABRB2	P47870	512 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	RFX2	P48378	723 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	BLK	P51451	505 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	BMX	P51813	675 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	LIMK1	P53667	647 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	GALC	P54803	685 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	CAPS	Q13938	189 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	RCN2	Q14257	317 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	RNPS1	Q15287	305 aa	Known RBP	4.68	□□□□□ -1.66
ATM-223	ENST00000533979	PLK5	Q496M5	336 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	IGSF11	Q5DX21	431 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	PMS2CL	Q68D20	193 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	CAMKMT	Q7Z624	323 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	AACS	Q86V21	672 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	GPSM1	Q86YR5	675 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	ADHFE1	Q8IWW8	467 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	GHDC	Q8N2G8	530 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	IQUB	Q8NA54	791 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	CTCFL	Q8NI51	663 aa	Predicted RBP	4.68	□□□□□ -1.66
ATM-223	ENST00000533979	PTPMT1	Q8WUK0	201 aa	Predicted RBP	4.68	□□□□□ -1.66
ATM-223	ENST00000533979	ASB5	Q8WWX0	329 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	SGCD	Q92629	289 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	LRRC59	Q96AG4	307 aa	Known RBP	4.68	□□□□□ -1.66
ATM-223	ENST00000533979	PTER	Q96BW5	349 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	HDAC11	Q96DB2	347 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	ARHGEF26	Q96DR7	871 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	ERO1A	Q96HE7	468 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	LINC00615	Q96LM1	132 aa	Predicted RBP	4.68	□□□□□ -1.66
ATM-223	ENST00000533979	IWS1	Q96ST2	819 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	SPX	Q9BT56	116 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	NUP85	Q9BW27	656 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	SF3B5	Q9BWJ5	86 aa	Known RBP	4.68	□□□□□ -1.66
ATM-223	ENST00000533979	C1orf21	Q9H246	121 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	MAP6D1	Q9H9H5	199 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	RNF146	Q9NTX7	359 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	BABAM1	Q9NWV8	329 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	GDE1	Q9NZC3	331 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	CNOT8	Q9UFF9	292 aa	Known RBP	4.68	□□□□□ -1.66
ATM-223	ENST00000533979	SH3BGRL2	Q9UJC5	107 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	PKP3	Q9Y446	797 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	LIPG	Q9Y5X9	500 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	NPHP4	O75161	1426 aa	Predicted RBP	4.68	□□□□□ -1.66
ATM-223	ENST00000533979	NHSL1	Q5SYE7	1610 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	CEP350	Q5VT06	3117 aa		4.68	□□□□□ -1.66
ATM-223	ENST00000533979	CDK13	Q14004	1512 aa	Known RBP	4.67	□□□□□ -1.66
ATM-223	ENST00000533979	FMN1	Q68DA7	1419 aa		4.67	□□□□□ -1.66
ATM-223	ENST00000533979	SCAPER	Q9BY12	1400 aa		4.67	□□□□□ -1.66
ATM-223	ENST00000533979	GPR75-ASB3	A0A0A6YYF3	556 aa		4.67	□□□□□ -1.66
ATM-223	ENST00000533979		A0A1W2PR77	199 aa		4.67	□□□□□ -1.66
ATM-223	ENST00000533979		A0A1W2PRV1	198 aa		4.67	□□□□□ -1.66
ATM-223	ENST00000533979	EME2	A4GXA9	379 aa	Predicted RBP	4.67	□□□□□ -1.66
ATM-223	ENST00000533979	ENO4	A6NNW6	628 aa		4.67	□□□□□ -1.66
ATM-223	ENST00000533979		H0YGN5	161 aa		4.67	□□□□□ -1.66
ATM-223	ENST00000533979	TNFRSF13B	O14836	293 aa	Predicted RBP	4.67	□□□□□ -1.66
ATM-223	ENST00000533979	MSI1	O43347	362 aa	Known RBP	4.67	□□□□□ -1.66
ATM-223	ENST00000533979	SPRY1	O43609	319 aa	Predicted RBP	4.67	□□□□□ -1.66
ATM-223	ENST00000533979	SOCS5	O75159	536 aa		4.67	□□□□□ -1.66
ATM-223	ENST00000533979	PENK	P01210	267 aa	Predicted RBP	4.67	□□□□□ -1.66
ATM-223	ENST00000533979	HOXC6	P09630	235 aa		4.67	□□□□□ -1.66
ATM-223	ENST00000533979	IRF1	P10914	325 aa		4.67	□□□□□ -1.66
ATM-223	ENST00000533979	PTPN3	P26045	913 aa		4.67	□□□□□ -1.66
ATM-223	ENST00000533979	TNFRSF8	P28908	595 aa		4.67	□□□□□ -1.66
ATM-223	ENST00000533979	CASP3	P42574	277 aa		4.67	□□□□□ -1.66
ATM-223	ENST00000533979	RAB28	P51157	221 aa		4.67	□□□□□ -1.66
ATM-223	ENST00000533979	CAPZA1	P52907	286 aa		4.67	□□□□□ -1.66
ATM-223	ENST00000533979	GALNT3	Q14435	633 aa		4.67	□□□□□ -1.66
ATM-223	ENST00000533979	FGFBP1	Q14512	234 aa		4.67	□□□□□ -1.66
ATM-223	ENST00000533979	ZNF273	Q14593	569 aa		4.67	□□□□□ -1.66
ATM-223	ENST00000533979	PCGF3	Q3KNV8	242 aa		4.67	□□□□□ -1.66
ATM-223	ENST00000533979	CXorf66	Q5JRM2	361 aa	Predicted RBP	4.67	□□□□□ -1.66
ATM-223	ENST00000533979	AAGAB	Q6PD74	315 aa		4.67	□□□□□ -1.66
ATM-223	ENST00000533979	SLC16A12	Q6ZSM3	486 aa		4.67	□□□□□ -1.66
ATM-223	ENST00000533979	MOB3C	Q70IA8	216 aa		4.67	□□□□□ -1.66
ATM-223	ENST00000533979	SPATA19	Q7Z5L4	167 aa		4.67	□□□□□ -1.66
ATM-223	ENST00000533979	ADCK2	Q7Z695	626 aa		4.67	□□□□□ -1.66
ATM-223	ENST00000533979	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	4.67	□□□□□ -1.66
ATM-223	ENST00000533979	GPAT4	Q86UL3	456 aa		4.67	□□□□□ -1.66
ATM-223	ENST00000533979	IGFN1	Q86VF2	1251 aa		4.67	□□□□□ -1.66
ATM-223	ENST00000533979	TMEM200A	Q86VY9	491 aa		4.67	□□□□□ -1.66
ATM-223	ENST00000533979	KLB	Q86Z14	1044 aa		4.67	□□□□□ -1.66
ATM-223	ENST00000533979	ATAD1	Q8NBU5	361 aa		4.67	□□□□□ -1.66
ATM-223	ENST00000533979	CAMKV	Q8NCB2	501 aa		4.67	□□□□□ -1.66
ATM-223	ENST00000533979	IP6K1	Q92551	441 aa		4.67	□□□□□ -1.66

Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms