RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 UAP1L1Q3KQV9 507 aa17.25■□□□□ 0.35
NXF1-216ENST00000533499 FAM153CQ494X1 144 aa17.25■□□□□ 0.35
NXF1-216ENST00000533499 STEAP4Q687X5 459 aa17.25■□□□□ 0.35
NXF1-216ENST00000533499 TMEM220Q6QAJ8 160 aa17.25■□□□□ 0.35
NXF1-216ENST00000533499 CERS6Q6ZMG9 384 aa17.25■□□□□ 0.35
NXF1-216ENST00000533499 C3orf62Q6ZUJ4 267 aa17.25■□□□□ 0.35
NXF1-216ENST00000533499 DENND6AQ8IWF6 608 aa17.25■□□□□ 0.35
NXF1-216ENST00000533499 OXR1Q8N573 874 aa17.25■□□□□ 0.35
NXF1-216ENST00000533499 MINDY1Q8N5J2 469 aa17.25■□□□□ 0.35
NXF1-216ENST00000533499 RASGEF1AQ8N9B8 481 aa17.25■□□□□ 0.35
NXF1-216ENST00000533499 CALML6Q8TD86 181 aa17.25■□□□□ 0.35
NXF1-216ENST00000533499 LMX1AQ8TE12 382 aa17.25■□□□□ 0.35
NXF1-216ENST00000533499 SGF29Q96ES7 293 aa17.25■□□□□ 0.35
NXF1-216ENST00000533499 EDEM2Q9BV94 578 aa17.25■□□□□ 0.35
NXF1-216ENST00000533499 CDC42EP4Q9H3Q1 356 aaKnown RBP17.25■□□□□ 0.35
NXF1-216ENST00000533499 FBXO6Q9NRD1 293 aaPredicted RBP17.25■□□□□ 0.35
NXF1-216ENST00000533499 GPR27Q9NS67 375 aa17.25■□□□□ 0.35
NXF1-216ENST00000533499 NINJ2Q9NZG7 142 aa17.25■□□□□ 0.35
NXF1-216ENST00000533499 VPS18Q9P253 973 aa17.25■□□□□ 0.35
NXF1-216ENST00000533499 SLC17A6Q9P2U8 582 aa17.25■□□□□ 0.35
NXF1-216ENST00000533499 KLF15Q9UIH9 416 aa17.25■□□□□ 0.35
NXF1-216ENST00000533499 SLC17A4Q9Y2C5 497 aa17.25■□□□□ 0.35
NXF1-216ENST00000533499 TRBV5-4A0A0C4DH59 114 aa17.24■□□□□ 0.35
NXF1-216ENST00000533499 TNFRSF10CO14798 259 aa17.24■□□□□ 0.35
NXF1-216ENST00000533499 GRID2O43424 1007 aa17.24■□□□□ 0.35
NXF1-216ENST00000533499 NUAK1O60285 661 aa17.24■□□□□ 0.35
NXF1-216ENST00000533499 OR1I1O60431 355 aa17.24■□□□□ 0.35
NXF1-216ENST00000533499 LRP3O75074 770 aa17.24■□□□□ 0.35
NXF1-216ENST00000533499 NME1P15531 152 aaKnown RBP17.24■□□□□ 0.35
NXF1-216ENST00000533499 MCM3P25205 808 aa17.24■□□□□ 0.35
NXF1-216ENST00000533499 SLC1A2P43004 574 aa17.24■□□□□ 0.35
NXF1-216ENST00000533499 HK3P52790 923 aa17.24■□□□□ 0.35
NXF1-216ENST00000533499 EIF3BP55884 814 aaKnown RBP17.24■□□□□ 0.35
NXF1-216ENST00000533499 MPP1Q00013 466 aa17.24■□□□□ 0.35
NXF1-216ENST00000533499 MGAT5Q09328 741 aa17.24■□□□□ 0.35
NXF1-216ENST00000533499 SLMAPQ14BN4 828 aa17.24■□□□□ 0.35
NXF1-216ENST00000533499 PRRT3Q5FWE3 981 aa17.24■□□□□ 0.35
NXF1-216ENST00000533499 CCNI2Q6ZMN8 369 aaPredicted RBP17.24■□□□□ 0.35
NXF1-216ENST00000533499 PRR23CQ6ZRP0 262 aa17.24■□□□□ 0.35
NXF1-216ENST00000533499 CHST15Q7LFX5 561 aaPredicted RBP17.24■□□□□ 0.35
NXF1-216ENST00000533499 CTAGE3PQ8IX95 158 aa17.24■□□□□ 0.35
NXF1-216ENST00000533499 CLDN19Q8N6F1 224 aa17.24■□□□□ 0.35
NXF1-216ENST00000533499 BEND7Q8N7W2 519 aaPredicted RBP17.24■□□□□ 0.35
NXF1-216ENST00000533499 UHMK1Q8TAS1 419 aaKnown RBP17.24■□□□□ 0.35
NXF1-216ENST00000533499 HEXDCQ8WVB3 486 aa17.24■□□□□ 0.35
NXF1-216ENST00000533499 OR2M4Q96R27 311 aa17.24■□□□□ 0.35
NXF1-216ENST00000533499 CLPBQ9H078 707 aa17.24■□□□□ 0.35
NXF1-216ENST00000533499 ERVMER34-1Q9H9K5 563 aa17.24■□□□□ 0.35
NXF1-216ENST00000533499 PLAC1Q9HBJ0 212 aa17.24■□□□□ 0.35
NXF1-216ENST00000533499 ZFATQ9P243 1243 aa17.24■□□□□ 0.35
NXF1-216ENST00000533499 PNMA8BQ9ULN7 279 aaPredicted RBP17.24■□□□□ 0.35
NXF1-216ENST00000533499 DOLKQ9UPQ8 538 aa17.24■□□□□ 0.35
NXF1-216ENST00000533499 AGAP14A8MT82 685 aa17.23■□□□□ 0.35
NXF1-216ENST00000533499 PIAS1O75925 651 aa17.23■□□□□ 0.35
NXF1-216ENST00000533499 FUCA1P04066 466 aa17.23■□□□□ 0.35
NXF1-216ENST00000533499 CSF2P04141 144 aa17.23■□□□□ 0.35
NXF1-216ENST00000533499 IVLP07476 585 aa17.23■□□□□ 0.35
NXF1-216ENST00000533499 ACP5P13686 325 aa17.23■□□□□ 0.35
NXF1-216ENST00000533499 ATP1B2P14415 290 aaPredicted RBP17.23■□□□□ 0.35
NXF1-216ENST00000533499 ZNF7P17097 686 aaPredicted RBP17.23■□□□□ 0.35
NXF1-216ENST00000533499 ITGB6P18564 788 aa17.23■□□□□ 0.35
NXF1-216ENST00000533499 OGNP20774 298 aaKnown RBP17.23■□□□□ 0.35
NXF1-216ENST00000533499 FMO4P31512 558 aa17.23■□□□□ 0.35
NXF1-216ENST00000533499 PHBP35232 272 aa17.23■□□□□ 0.35
NXF1-216ENST00000533499 NSG1P42857 185 aa17.23■□□□□ 0.35
NXF1-216ENST00000533499 CCT8P50990 548 aa17.23■□□□□ 0.35
NXF1-216ENST00000533499 CTSCP53634 463 aa17.23■□□□□ 0.35
NXF1-216ENST00000533499 GPX6P59796 221 aa17.23■□□□□ 0.35
NXF1-216ENST00000533499 HNRNPKP61978 463 aaKnown RBP eCLIP17.23■□□□□ 0.35
NXF1-216ENST00000533499 BNIP3Q12983 259 aa17.23■□□□□ 0.35
NXF1-216ENST00000533499 ITIH4Q14624 930 aa17.23■□□□□ 0.35
NXF1-216ENST00000533499 INSCQ1MX18 579 aa17.23■□□□□ 0.35
NXF1-216ENST00000533499 ZNF423Q2M1K9 1284 aa17.23■□□□□ 0.35
NXF1-216ENST00000533499 LRRTM4Q86VH4 590 aa17.23■□□□□ 0.35
NXF1-216ENST00000533499 GATAD2AQ86YP4 633 aa17.23■□□□□ 0.35
NXF1-216ENST00000533499 MRRFQ96E11 262 aaKnown RBP17.23■□□□□ 0.35
NXF1-216ENST00000533499 PARD6BQ9BYG5 372 aa17.23■□□□□ 0.35
NXF1-216ENST00000533499 TMEM168Q9H0V1 697 aa17.23■□□□□ 0.35
NXF1-216ENST00000533499 LRRC4CQ9HCJ2 640 aa17.23■□□□□ 0.35
NXF1-216ENST00000533499 TM7SF3Q9NS93 570 aa17.23■□□□□ 0.35
NXF1-216ENST00000533499 SPASTQ9UBP0 616 aa17.23■□□□□ 0.35
NXF1-216ENST00000533499 FBXO5Q9UKT4 447 aa17.23■□□□□ 0.35
NXF1-216ENST00000533499 DNAJC16Q9Y2G8 782 aa17.23■□□□□ 0.35
NXF1-216ENST00000533499 CRYL1Q9Y2S2 319 aa17.23■□□□□ 0.35
NXF1-216ENST00000533499 PLEKHM1Q9Y4G2 1056 aa17.23■□□□□ 0.35
NXF1-216ENST00000533499 PRSS21Q9Y6M0 314 aa17.23■□□□□ 0.35
NXF1-216ENST00000533499 VPS13AQ96RL7 3174 aa17.23■□□□□ 0.35
NXF1-216ENST00000533499 PCDH15Q96QU1 1955 aa17.22■□□□□ 0.35
NXF1-216ENST00000533499 A0A1B0GTQ1 180 aa17.22■□□□□ 0.35
NXF1-216ENST00000533499 TCRBV9S1A1TA0A576 114 aa17.22■□□□□ 0.35
NXF1-216ENST00000533499 FFAR2O15552 330 aa17.22■□□□□ 0.35
NXF1-216ENST00000533499 DNAJC6O75061 913 aa17.22■□□□□ 0.35
NXF1-216ENST00000533499 GSTA2P09210 222 aa17.22■□□□□ 0.35
NXF1-216ENST00000533499 TNFRSF8P28908 595 aa17.22■□□□□ 0.35
NXF1-216ENST00000533499 STX2P32856 288 aa17.22■□□□□ 0.35
NXF1-216ENST00000533499 B4GALNT1Q00973 533 aa17.22■□□□□ 0.35
NXF1-216ENST00000533499 PYCR3Q53H96 274 aa17.22■□□□□ 0.35
NXF1-216ENST00000533499 RNF187Q5TA31 235 aaPredicted RBP17.22■□□□□ 0.35
NXF1-216ENST00000533499 PTRHD1Q6GMV3 140 aaKnown RBP17.22■□□□□ 0.35
NXF1-216ENST00000533499 TAF8Q7Z7C8 310 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms