RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 SDC3O75056 442 aa11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 DNAJC6O75061 913 aa11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 NDUFS3O75489 264 aa11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 PIAS2O75928 621 aa11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 ATP1B2P14415 290 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 ZNF7P17097 686 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 DGKAP23743 735 aa11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 ARNTP27540 789 aa11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 EPHA8P29322 1005 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 NSG1P42857 185 aa11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 MAGEA4P43358 317 aa11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 TTPAP49638 278 aa11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 C1orf61Q13536 156 aa11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 ITIH4Q14624 930 aa11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 CRYMQ14894 314 aa11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 DBN1Q16643 649 aa11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 KHDC1Q4VXA5 237 aaKnown RBP11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 PYCR3Q53H96 274 aa11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 STPG1Q5TH74 334 aa11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 TMEM220Q6QAJ8 160 aa11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 UNC5AQ6ZN44 842 aa11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 GATAD2AQ86YP4 633 aa11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 LMNTD2Q8IXW0 634 aa11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 RBFAQ8N0V3 343 aa11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 SDR16C5Q8N3Y7 309 aa11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 FSTL5Q8N475 847 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 RASGEF1AQ8N9B8 481 aa11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 GPR150Q8NGU9 434 aa11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 CALML6Q8TD86 181 aa11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 SAP25Q8TEE9 199 aa11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 SCG3Q8WXD2 468 aaKnown RBP11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 SGF29Q96ES7 293 aa11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 OR2M4Q96R27 311 aa11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 TCF12Q99081 682 aa11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 FMO2Q99518 471 aa11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 TMEM168Q9H0V1 697 aa11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 TCEAL2Q9H3H9 227 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 PPANQ9NQ55 473 aaKnown RBP11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 DOLKQ9UPQ8 538 aa11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 DNMT3AQ9Y6K1 912 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 CSNK1G3Q9Y6M4 447 aa11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 GON4LQ3T8J9 2241 aa11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 SPAG17Q6Q759 2223 aa11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 PLXNA2O75051 1894 aa11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 GPR179Q6PRD1 2367 aa11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 ZFHX2Q9C0A1 2572 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 IGLV3-16A0A075B6K0 115 aa11.09□□□□□ -0.63
TRAPPC4-211ENST00000533012 F8W8V4 182 aa11.09□□□□□ -0.63
TRAPPC4-211ENST00000533012 KCNJ13O60928 360 aa11.09□□□□□ -0.63
TRAPPC4-211ENST00000533012 ANXA6P08133 673 aa11.09□□□□□ -0.63
TRAPPC4-211ENST00000533012 ALPPL2P10696 532 aa11.09□□□□□ -0.63
TRAPPC4-211ENST00000533012 HOXD11P31277 338 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC4-211ENST00000533012 LIMK1P53667 647 aa11.09□□□□□ -0.63
TRAPPC4-211ENST00000533012 ILF3Q12906 894 aaKnown RBP eCLIP11.09□□□□□ -0.63
TRAPPC4-211ENST00000533012 LRP8Q14114 963 aa11.09□□□□□ -0.63
TRAPPC4-211ENST00000533012 FASTKD3Q14CZ7 662 aaKnown RBP11.09□□□□□ -0.63
TRAPPC4-211ENST00000533012 INAVAQ3KP66 663 aa11.09□□□□□ -0.63
TRAPPC4-211ENST00000533012 HSP90AA5PQ58FG0 334 aa11.09□□□□□ -0.63
TRAPPC4-211ENST00000533012 RNF187Q5TA31 235 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC4-211ENST00000533012 KCTD16Q68DU8 428 aa11.09□□□□□ -0.63
TRAPPC4-211ENST00000533012 CRTC3Q6UUV7 619 aa11.09□□□□□ -0.63
TRAPPC4-211ENST00000533012 DBX2Q6ZNG2 339 aa11.09□□□□□ -0.63
TRAPPC4-211ENST00000533012 C3orf62Q6ZUJ4 267 aa11.09□□□□□ -0.63
TRAPPC4-211ENST00000533012 MICALCLQ6ZW33 695 aa11.09□□□□□ -0.63
TRAPPC4-211ENST00000533012 DET1Q7L5Y6 550 aa11.09□□□□□ -0.63
TRAPPC4-211ENST00000533012 CHST15Q7LFX5 561 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC4-211ENST00000533012 TAF8Q7Z7C8 310 aa11.09□□□□□ -0.63
TRAPPC4-211ENST00000533012 LDB1Q86U70 411 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC4-211ENST00000533012 LRRTM4Q86VH4 590 aa11.09□□□□□ -0.63
TRAPPC4-211ENST00000533012 KCNMB4Q86W47 210 aa11.09□□□□□ -0.63
TRAPPC4-211ENST00000533012 GKN2Q86XP6 184 aa11.09□□□□□ -0.63
TRAPPC4-211ENST00000533012 TRAPPC5Q8IUR0 188 aa11.09□□□□□ -0.63
TRAPPC4-211ENST00000533012 SLC25A45Q8N413 288 aa11.09□□□□□ -0.63
TRAPPC4-211ENST00000533012 ZNF548Q8NEK5 533 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC4-211ENST00000533012 GSDMBQ8TAX9 411 aa11.09□□□□□ -0.63
TRAPPC4-211ENST00000533012 NETO1Q8TDF5 533 aa11.09□□□□□ -0.63
TRAPPC4-211ENST00000533012 LRRC61Q9BV99 259 aa11.09□□□□□ -0.63
TRAPPC4-211ENST00000533012 GSDMCQ9BYG8 508 aa11.09□□□□□ -0.63
TRAPPC4-211ENST00000533012 CLPBQ9H078 707 aa11.09□□□□□ -0.63
TRAPPC4-211ENST00000533012 UCKL1Q9NWZ5 548 aa11.09□□□□□ -0.63
TRAPPC4-211ENST00000533012 MARCH4Q9P2E8 410 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC4-211ENST00000533012 NFU1Q9UMS0 254 aa11.09□□□□□ -0.63
TRAPPC4-211ENST00000533012 VPS9D1Q9Y2B5 631 aa11.09□□□□□ -0.63
TRAPPC4-211ENST00000533012 PRKAB1Q9Y478 270 aa11.09□□□□□ -0.63
TRAPPC4-211ENST00000533012 LRRK1Q38SD2 2015 aa11.08□□□□□ -0.64
TRAPPC4-211ENST00000533012 OR2AG2A6NM03 316 aa11.08□□□□□ -0.64
TRAPPC4-211ENST00000533012 LMO7DNF2Z398 122 aa11.08□□□□□ -0.64
TRAPPC4-211ENST00000533012 QSOX1O00391 747 aa11.08□□□□□ -0.64
TRAPPC4-211ENST00000533012 TPP1O14773 563 aa11.08□□□□□ -0.64
TRAPPC4-211ENST00000533012 YY2O15391 372 aa11.08□□□□□ -0.64
TRAPPC4-211ENST00000533012 POP7O75817 140 aaKnown RBP11.08□□□□□ -0.64
TRAPPC4-211ENST00000533012 AP2A2O94973 939 aa11.08□□□□□ -0.64
TRAPPC4-211ENST00000533012 GSTA2P09210 222 aa11.08□□□□□ -0.64
TRAPPC4-211ENST00000533012 OR56A5P0C7T3 313 aa11.08□□□□□ -0.64
TRAPPC4-211ENST00000533012 ERVK-10P10266 1014 aa11.08□□□□□ -0.64
TRAPPC4-211ENST00000533012 CD59P13987 128 aa11.08□□□□□ -0.64
TRAPPC4-211ENST00000533012 VCLP18206 1134 aa11.08□□□□□ -0.64
TRAPPC4-211ENST00000533012 OGNP20774 298 aaKnown RBP11.08□□□□□ -0.64
TRAPPC4-211ENST00000533012 CTSCP53634 463 aa11.08□□□□□ -0.64
TRAPPC4-211ENST00000533012 B4GALNT1Q00973 533 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms