RNA–Protein interactions for RNA: ENST00000532791.5

FGFR1-238, Transcript of fibroblast growth factor receptor 1, human

APPRIS ALT1 TSL 5 BASIC

Gene FGFR1, Length 5,590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-238	ENST00000532791	RALGPS2	Q86X27	583 aa	Predicted RBP	19.41	■□□□□ 0.7
FGFR1-238	ENST00000532791	CCDC177	Q9NQR7	707 aa	Predicted RBP	19.41	■□□□□ 0.7
FGFR1-238	ENST00000532791	TRMT13	Q9NUP7	481 aa	Known RBP	19.41	■□□□□ 0.7
FGFR1-238	ENST00000532791	MAP4K5	Q9Y4K4	846 aa		19.41	■□□□□ 0.7
FGFR1-238	ENST00000532791	GMFG	O60234	142 aa		19.4	■□□□□ 0.7
FGFR1-238	ENST00000532791	RBBP4	Q09028	425 aa		19.4	■□□□□ 0.7
FGFR1-238	ENST00000532791	RIPK1	Q13546	671 aa		19.4	■□□□□ 0.7
FGFR1-238	ENST00000532791	SUZ12	Q15022	739 aa	Known RBP	19.4	■□□□□ 0.7
FGFR1-238	ENST00000532791	HKDC1	Q2TB90	917 aa		19.4	■□□□□ 0.7
FGFR1-238	ENST00000532791	MED27	Q6P2C8	311 aa		19.4	■□□□□ 0.7
FGFR1-238	ENST00000532791	TMPRSS11A	Q6ZMR5	421 aa		19.4	■□□□□ 0.7
FGFR1-238	ENST00000532791	TAF8	Q7Z7C8	310 aa		19.4	■□□□□ 0.7
FGFR1-238	ENST00000532791	GALNT5	Q7Z7M9	940 aa		19.4	■□□□□ 0.7
FGFR1-238	ENST00000532791	NPAS4	Q8IUM7	802 aa		19.4	■□□□□ 0.7
FGFR1-238	ENST00000532791	UNC5B	Q8IZJ1	945 aa		19.4	■□□□□ 0.7
FGFR1-238	ENST00000532791	CPT1B	Q92523	772 aa		19.4	■□□□□ 0.7
FGFR1-238	ENST00000532791	CIDEB	Q9UHD4	219 aa		19.4	■□□□□ 0.7
FGFR1-238	ENST00000532791	GTF2IRD1	Q9UHL9	959 aa		19.4	■□□□□ 0.7
FGFR1-238	ENST00000532791	REXO2	Q9Y3B8	237 aa	Known RBP	19.4	■□□□□ 0.7
FGFR1-238	ENST00000532791	PLOD3	O60568	738 aa		19.4	■□□□□ 0.7
FGFR1-238	ENST00000532791	XIAP	P98170	497 aa		19.4	■□□□□ 0.7
FGFR1-238	ENST00000532791	TCF25	Q9BQ70	676 aa		19.4	■□□□□ 0.7
FGFR1-238	ENST00000532791	CHID1	Q9BWS9	393 aa		19.4	■□□□□ 0.7
FGFR1-238	ENST00000532791	MAGEH1	Q9H213	219 aa		19.4	■□□□□ 0.7
FGFR1-238	ENST00000532791	PLGRKT	Q9HBL7	147 aa		19.4	■□□□□ 0.7
FGFR1-238	ENST00000532791	ACSS2	Q9NR19	701 aa		19.4	■□□□□ 0.7
FGFR1-238	ENST00000532791	DNAJC28	Q9NX36	388 aa		19.4	■□□□□ 0.7
FGFR1-238	ENST00000532791	KIDINS220	Q9ULH0	1771 aa		19.4	■□□□□ 0.7
FGFR1-238	ENST00000532791	FADS2	O95864	444 aa	Known RBP	19.4	■□□□□ 0.7
FGFR1-238	ENST00000532791	ZYG11A	Q6WRX3	759 aa		19.4	■□□□□ 0.7
FGFR1-238	ENST00000532791	CADM2	Q8N3J6	435 aa		19.4	■□□□□ 0.7
FGFR1-238	ENST00000532791	CD99L2	Q8TCZ2	262 aa		19.4	■□□□□ 0.7
FGFR1-238	ENST00000532791	HMCES	Q96FZ2	354 aa		19.4	■□□□□ 0.7
FGFR1-238	ENST00000532791	KCNN2	Q9H2S1	579 aa		19.4	■□□□□ 0.7
FGFR1-238	ENST00000532791	DPEP3	Q9H4B8	488 aa		19.4	■□□□□ 0.7
FGFR1-238	ENST00000532791	INSIG1	O15503	277 aa		19.4	■□□□□ 0.7
FGFR1-238	ENST00000532791	SIN3B	O75182	1162 aa		19.4	■□□□□ 0.7
FGFR1-238	ENST00000532791	POP4	O95707	220 aa	Known RBP	19.4	■□□□□ 0.7
FGFR1-238	ENST00000532791	LYN	P07948	512 aa		19.4	■□□□□ 0.7
FGFR1-238	ENST00000532791	HSPA7	P48741	367 aa		19.4	■□□□□ 0.7
FGFR1-238	ENST00000532791	OLR1	P78380	273 aa		19.4	■□□□□ 0.7
FGFR1-238	ENST00000532791	PQLC1	Q8N2U9	271 aa		19.4	■□□□□ 0.7
FGFR1-238	ENST00000532791	OR7D4	Q8NG98	312 aa		19.4	■□□□□ 0.7
FGFR1-238	ENST00000532791	DSN1	Q9H410	356 aa		19.4	■□□□□ 0.7
FGFR1-238	ENST00000532791	DHX33	Q9H6R0	707 aa	Known RBP	19.4	■□□□□ 0.7
FGFR1-238	ENST00000532791	CKLF	Q9UBR5	152 aa		19.4	■□□□□ 0.7
FGFR1-238	ENST00000532791	ING4	Q9UNL4	249 aa		19.4	■□□□□ 0.7
FGFR1-238	ENST00000532791	ATRN	O75882	1429 aa		19.39	■□□□□ 0.7
FGFR1-238	ENST00000532791	FAM25E	A8MYX2	175 aa		19.39	■□□□□ 0.7
FGFR1-238	ENST00000532791	MATN3	O15232	486 aa		19.39	■□□□□ 0.7
FGFR1-238	ENST00000532791	ILF3	Q12906	894 aa	Known RBP eCLIP	19.39	■□□□□ 0.7	2e-9	■□□□□ 10.1
FGFR1-238	ENST00000532791	IL23R	Q5VWK5	629 aa		19.39	■□□□□ 0.7
FGFR1-238	ENST00000532791	MSL3	Q8N5Y2	521 aa	Known RBP	19.39	■□□□□ 0.7
FGFR1-238	ENST00000532791	PCED1B	Q96HM7	432 aa		19.39	■□□□□ 0.7
FGFR1-238	ENST00000532791	RASSF1	Q9NS23	344 aa		19.39	■□□□□ 0.7
FGFR1-238	ENST00000532791	STXBP5L	Q9Y2K9	1186 aa		19.39	■□□□□ 0.7
FGFR1-238	ENST00000532791	FCF1	Q9Y324	198 aa	Known RBP	19.39	■□□□□ 0.7
FGFR1-238	ENST00000532791	ARL5C	A6NH57	179 aa		19.39	■□□□□ 0.69
FGFR1-238	ENST00000532791	CLDN4	O14493	209 aa		19.39	■□□□□ 0.69
FGFR1-238	ENST00000532791	FABP3	P05413	133 aa		19.39	■□□□□ 0.69
FGFR1-238	ENST00000532791	OLFML2A	Q68BL7	652 aa		19.39	■□□□□ 0.69
FGFR1-238	ENST00000532791	CHST15	Q7LFX5	561 aa	Predicted RBP	19.39	■□□□□ 0.69
FGFR1-238	ENST00000532791	TAC4	Q86UU9	113 aa		19.39	■□□□□ 0.69
FGFR1-238	ENST00000532791	FAM129C	Q86XR2	697 aa		19.39	■□□□□ 0.69
FGFR1-238	ENST00000532791	FAM47B	Q8NA70	645 aa		19.39	■□□□□ 0.69
FGFR1-238	ENST00000532791	TNFRSF25	Q93038	417 aa		19.39	■□□□□ 0.69
FGFR1-238	ENST00000532791	C1GALT1C1	Q96EU7	318 aa		19.39	■□□□□ 0.69
FGFR1-238	ENST00000532791	HNRNPAB	Q99729	332 aa	Known RBP	19.39	■□□□□ 0.69
FGFR1-238	ENST00000532791	PRKAB1	Q9Y478	270 aa		19.39	■□□□□ 0.69
FGFR1-238	ENST00000532791	PCDHGC4	Q9Y5F7	938 aa		19.39	■□□□□ 0.69
FGFR1-238	ENST00000532791	MAFB	Q9Y5Q3	323 aa	Predicted RBP	19.39	■□□□□ 0.69
FGFR1-238	ENST00000532791	KLRG2	A4D1S0	409 aa	Predicted RBP	19.39	■□□□□ 0.69
FGFR1-238	ENST00000532791	CDH3	P22223	829 aa		19.39	■□□□□ 0.69
FGFR1-238	ENST00000532791	CLC	Q05315	142 aa		19.39	■□□□□ 0.69
FGFR1-238	ENST00000532791	SNAPC1	Q16533	368 aa		19.39	■□□□□ 0.69
FGFR1-238	ENST00000532791	PPM1J	Q5JR12	505 aa		19.39	■□□□□ 0.69
FGFR1-238	ENST00000532791	ING5	Q8WYH8	240 aa		19.39	■□□□□ 0.69
FGFR1-238	ENST00000532791	SNX27	Q96L92	541 aa		19.39	■□□□□ 0.69
FGFR1-238	ENST00000532791	ARHGEF4	Q9NR80	690 aa		19.39	■□□□□ 0.69
FGFR1-238	ENST00000532791	RWDD3	Q9Y3V2	267 aa		19.39	■□□□□ 0.69
FGFR1-238	ENST00000532791	L1CAM	P32004	1257 aa		19.39	■□□□□ 0.69
FGFR1-238	ENST00000532791	GTF2H2	Q13888	395 aa		19.39	■□□□□ 0.69
FGFR1-238	ENST00000532791	GTF2H2C	Q6P1K8	395 aa		19.39	■□□□□ 0.69
FGFR1-238	ENST00000532791	KCNU1	A8MYU2	1149 aa		19.38	■□□□□ 0.69
FGFR1-238	ENST00000532791	GPR25	O00155	361 aa		19.38	■□□□□ 0.69
FGFR1-238	ENST00000532791	CAPN15	O75808	1086 aa		19.38	■□□□□ 0.69
FGFR1-238	ENST00000532791	SNHG28	P0DPA3	235 aa		19.38	■□□□□ 0.69
FGFR1-238	ENST00000532791	AP1S1	P61966	158 aa		19.38	■□□□□ 0.69
FGFR1-238	ENST00000532791	ACAP2	Q15057	778 aa		19.38	■□□□□ 0.69
FGFR1-238	ENST00000532791	MSANTD2	Q6P1R3	559 aa		19.38	■□□□□ 0.69
FGFR1-238	ENST00000532791	SPATA22	Q8NHS9	363 aa		19.38	■□□□□ 0.69
FGFR1-238	ENST00000532791	AK5	Q9Y6K8	562 aa		19.38	■□□□□ 0.69
FGFR1-238	ENST00000532791	AHCYL1	O43865	530 aa		19.38	■□□□□ 0.69
FGFR1-238	ENST00000532791	TCF4	P15884	667 aa		19.38	■□□□□ 0.69
FGFR1-238	ENST00000532791	MNDA	P41218	407 aa		19.38	■□□□□ 0.69
FGFR1-238	ENST00000532791	MASP1	P48740	699 aa		19.38	■□□□□ 0.69
FGFR1-238	ENST00000532791	MAPK12	P53778	367 aa		19.38	■□□□□ 0.69
FGFR1-238	ENST00000532791	PPIG	Q13427	754 aa	Known RBP eCLIP	19.38	■□□□□ 0.69	4e-7	■■□□□ 12.7
FGFR1-238	ENST00000532791	CIR1	Q86X95	450 aa	Predicted RBP	19.38	■□□□□ 0.69
FGFR1-238	ENST00000532791	OR2T34	Q8NGX1	318 aa		19.38	■□□□□ 0.69

Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms