RNA–Protein interactions for RNA: ENST00000532451.1

SORL1-210, Transcript of sortilin related receptor 1, humanhuman

TSL 1 (best)

Gene SORL1, Length 2,165 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-210ENST00000532451 ZNF296Q8WUU4 475 aaPredicted RBP23.32■■□□□ 1.32
SORL1-210ENST00000532451 EME1Q96AY2 570 aa23.32■■□□□ 1.32
SORL1-210ENST00000532451 PIDD1Q9HB75 910 aa23.32■■□□□ 1.32
SORL1-210ENST00000532451 PLXNA4Q9HCM2 1894 aa23.32■■□□□ 1.32
SORL1-210ENST00000532451 PFDN4Q9NQP4 134 aa23.32■■□□□ 1.32
SORL1-210ENST00000532451 UBAP1Q9NZ09 502 aa23.32■■□□□ 1.32
SORL1-210ENST00000532451 ZNF26P17031 533 aaPredicted RBP23.31■■□□□ 1.32
SORL1-210ENST00000532451 GRIK2Q13002 908 aa23.31■■□□□ 1.32
SORL1-210ENST00000532451 LIN52Q52LA3 116 aa23.31■■□□□ 1.32
SORL1-210ENST00000532451 IRAK1BP1Q5VVH5 260 aa23.31■■□□□ 1.32
SORL1-210ENST00000532451 TXNDC8Q6A555 127 aa23.31■■□□□ 1.32
SORL1-210ENST00000532451 CAMK1DQ8IU85 385 aa23.31■■□□□ 1.32
SORL1-210ENST00000532451 SLC15A3Q8IY34 581 aa23.31■■□□□ 1.32
SORL1-210ENST00000532451 OR2T34Q8NGX1 318 aa23.31■■□□□ 1.32
SORL1-210ENST00000532451 OR2T3Q8NH03 318 aa23.31■■□□□ 1.32
SORL1-210ENST00000532451 BHMTQ93088 406 aa23.31■■□□□ 1.32
SORL1-210ENST00000532451 PDLIM5Q96HC4 596 aaKnown RBP23.31■■□□□ 1.32
SORL1-210ENST00000532451 DEFB118Q96PH6 123 aa23.31■■□□□ 1.32
SORL1-210ENST00000532451 ZNF382Q96SR6 550 aa23.31■■□□□ 1.32
SORL1-210ENST00000532451 UHRF1Q96T88 793 aaPredicted RBP23.31■■□□□ 1.32
SORL1-210ENST00000532451 EFHD1Q9BUP0 239 aa23.31■■□□□ 1.32
SORL1-210ENST00000532451 SLC24A3Q9HC58 644 aa23.31■■□□□ 1.32
SORL1-210ENST00000532451 GOLGA8CPA6NN73 597 aa23.31■■□□□ 1.32
SORL1-210ENST00000532451 OLFM2O95897 454 aa23.31■■□□□ 1.32
SORL1-210ENST00000532451 CDKL1Q00532 357 aa23.31■■□□□ 1.32
SORL1-210ENST00000532451 ANKRD33Q7Z3H0 272 aa23.31■■□□□ 1.32
SORL1-210ENST00000532451 TCEAL8Q8IYN2 117 aa23.31■■□□□ 1.32
SORL1-210ENST00000532451 APCDD1Q8J025 514 aa23.31■■□□□ 1.32
SORL1-210ENST00000532451 ZUFSPQ96AP4 578 aa23.31■■□□□ 1.32
SORL1-210ENST00000532451 LRRC58Q96CX6 371 aa23.31■■□□□ 1.32
SORL1-210ENST00000532451 ACOX2Q99424 681 aa23.31■■□□□ 1.32
SORL1-210ENST00000532451 SEMA6AQ9H2E6 1030 aa23.31■■□□□ 1.32
SORL1-210ENST00000532451 OR4F21O95013 312 aa23.3■■□□□ 1.32
SORL1-210ENST00000532451 URODP06132 367 aa23.3■■□□□ 1.32
SORL1-210ENST00000532451 FESP07332 822 aa23.3■■□□□ 1.32
SORL1-210ENST00000532451 ATP6V1B2P21281 511 aa23.3■■□□□ 1.32
SORL1-210ENST00000532451 GRIA2P42262 883 aa23.3■■□□□ 1.32
SORL1-210ENST00000532451 FOXM1Q08050 763 aa23.3■■□□□ 1.32
SORL1-210ENST00000532451 SCIMPQ6UWF3 145 aa23.3■■□□□ 1.32
SORL1-210ENST00000532451 FAM217AQ8IXS0 508 aa23.3■■□□□ 1.32
SORL1-210ENST00000532451 OR6K2Q8NGY2 324 aa23.3■■□□□ 1.32
SORL1-210ENST00000532451 OR2T11Q8NH01 316 aa23.3■■□□□ 1.32
SORL1-210ENST00000532451 AUTS2Q8WXX7 1259 aa23.3■■□□□ 1.32
SORL1-210ENST00000532451 SLC45A3Q96JT2 553 aa23.3■■□□□ 1.32
SORL1-210ENST00000532451 C2orf49Q9BVC5 232 aaPredicted RBP23.3■■□□□ 1.32
SORL1-210ENST00000532451 IL21Q9HBE4 155 aa23.3■■□□□ 1.32
SORL1-210ENST00000532451 CNOT6Q9ULM6 557 aaKnown RBP23.3■■□□□ 1.32
SORL1-210ENST00000532451 ZNF839A8K0R7 811 aa23.3■■□□□ 1.32
SORL1-210ENST00000532451 CSPG5O95196 566 aa23.3■■□□□ 1.32
SORL1-210ENST00000532451 HSD17B1P14061 328 aa23.3■■□□□ 1.32
SORL1-210ENST00000532451 SLC6A2P23975 617 aa23.3■■□□□ 1.32
SORL1-210ENST00000532451 CAPRIN1Q14444 709 aaKnown RBP23.3■■□□□ 1.32
SORL1-210ENST00000532451 C6orf52Q5T4I8 152 aa23.3■■□□□ 1.32
SORL1-210ENST00000532451 RETSATQ6NUM9 610 aa23.3■■□□□ 1.32
SORL1-210ENST00000532451 CNKSR3Q6P9H4 555 aa23.3■■□□□ 1.32
SORL1-210ENST00000532451 FAM151BQ6UXP7 276 aa23.3■■□□□ 1.32
SORL1-210ENST00000532451 FRA10AC1Q70Z53 315 aa23.3■■□□□ 1.32
SORL1-210ENST00000532451 CNBD2Q96M20 576 aa23.3■■□□□ 1.32
SORL1-210ENST00000532451 CCT7Q99832 543 aa23.3■■□□□ 1.32
SORL1-210ENST00000532451 BRINP2Q9C0B6 783 aa23.3■■□□□ 1.32
SORL1-210ENST00000532451 RIC8BQ9NVN3 520 aa23.3■■□□□ 1.32
SORL1-210ENST00000532451 CMTM6Q9NX76 183 aa23.3■■□□□ 1.32
SORL1-210ENST00000532451 EVLQ9UI08 416 aaPredicted RBP23.3■■□□□ 1.32
SORL1-210ENST00000532451 SNX13Q9Y5W8 968 aa23.3■■□□□ 1.32
SORL1-210ENST00000532451 A0A1W2PP18 115 aa23.29■■□□□ 1.32
SORL1-210ENST00000532451 ENO4A6NNW6 628 aa23.29■■□□□ 1.32
SORL1-210ENST00000532451 H0YJX3 145 aa23.29■■□□□ 1.32
SORL1-210ENST00000532451 AHCYL1O43865 530 aa23.29■■□□□ 1.32
SORL1-210ENST00000532451 GRIA3P42263 894 aa23.29■■□□□ 1.32
SORL1-210ENST00000532451 KCNK10P57789 538 aa23.29■■□□□ 1.32
SORL1-210ENST00000532451 RCAN2Q14206 197 aa23.29■■□□□ 1.32
SORL1-210ENST00000532451 PTRHD1Q6GMV3 140 aaKnown RBP23.29■■□□□ 1.32
SORL1-210ENST00000532451 ADAMTSL2Q86TH1 951 aa23.29■■□□□ 1.32
SORL1-210ENST00000532451 SERPINA9Q86WD7 417 aa23.29■■□□□ 1.32
SORL1-210ENST00000532451 GRIN3AQ8TCU5 1115 aa23.29■■□□□ 1.32
SORL1-210ENST00000532451 CCDC97Q96F63 343 aaPredicted RBP23.29■■□□□ 1.32
SORL1-210ENST00000532451 CLPBQ9H078 707 aa23.29■■□□□ 1.32
SORL1-210ENST00000532451 PAK6Q9NQU5 681 aaPredicted RBP23.29■■□□□ 1.32
SORL1-210ENST00000532451 GAPDHSO14556 408 aaPredicted RBP23.28■■□□□ 1.32
SORL1-210ENST00000532451 SMAD6O43541 496 aaKnown RBP23.28■■□□□ 1.32
SORL1-210ENST00000532451 PRAMEF1O95521 474 aa23.28■■□□□ 1.32
SORL1-210ENST00000532451 ZNF7P17097 686 aaPredicted RBP23.28■■□□□ 1.32
SORL1-210ENST00000532451 RPS3P23396 243 aaKnown RBP eCLIP23.28■■□□□ 1.323e-7■■■■■ 34.1
SORL1-210ENST00000532451 ERVPABLB-1P60509 514 aa23.28■■□□□ 1.32
SORL1-210ENST00000532451 ERVK-8P63133 956 aa23.28■■□□□ 1.32
SORL1-210ENST00000532451 BNIP2Q12982 314 aa23.28■■□□□ 1.32
SORL1-210ENST00000532451 PDCD4Q53EL6 469 aaKnown RBP23.28■■□□□ 1.32
SORL1-210ENST00000532451 CDYL2Q8N8U2 506 aa23.28■■□□□ 1.32
SORL1-210ENST00000532451 TTC16Q8NEE8 873 aa23.28■■□□□ 1.32
SORL1-210ENST00000532451 OR52B6Q8NGF0 335 aa23.28■■□□□ 1.32
SORL1-210ENST00000532451 TEX37Q96LM6 180 aa23.28■■□□□ 1.32
SORL1-210ENST00000532451 TRIM15Q9C019 465 aa23.28■■□□□ 1.32
SORL1-210ENST00000532451 COQ10BQ9H8M1 238 aa23.28■■□□□ 1.32
SORL1-210ENST00000532451 ZFYVE1Q9HBF4 777 aa23.28■■□□□ 1.32
SORL1-210ENST00000532451 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP23.28■■□□□ 1.32
SORL1-210ENST00000532451 SMIM18P0DKX4 95 aa23.28■■□□□ 1.32
SORL1-210ENST00000532451 ZFP36L2P47974 494 aaKnown RBP23.28■■□□□ 1.32
SORL1-210ENST00000532451 BCL2L1Q07817 233 aa23.28■■□□□ 1.32
SORL1-210ENST00000532451 PCBP2Q15366 365 aaKnown RBP eCLIP23.28■■□□□ 1.321e-7■■■■■ 29.9
SORL1-210ENST00000532451 MTX3Q5HYI7 312 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms