RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 LACTB2Q53H82 288 aaPredicted RBP18.14■□□□□ 0.49
SSSCA1-206ENST00000531405 B4GALNT4Q76KP1 1039 aa18.14■□□□□ 0.49
SSSCA1-206ENST00000531405 TMC3Q7Z5M5 1100 aa18.14■□□□□ 0.49
SSSCA1-206ENST00000531405 LUZP1Q86V48 1076 aa18.14■□□□□ 0.49
SSSCA1-206ENST00000531405 TRAM1L1Q8N609 369 aa18.14■□□□□ 0.49
SSSCA1-206ENST00000531405 RSC1A1Q92681 617 aa18.14■□□□□ 0.49
SSSCA1-206ENST00000531405 AGAP3Q96P47 875 aa18.14■□□□□ 0.49
SSSCA1-206ENST00000531405 OR6C1Q96RD1 312 aa18.14■□□□□ 0.49
SSSCA1-206ENST00000531405 UCK1Q9HA47 277 aa18.14■□□□□ 0.49
SSSCA1-206ENST00000531405 ANKMY1Q9P2S6 941 aa18.14■□□□□ 0.49
SSSCA1-206ENST00000531405 CROTQ9UKG9 612 aa18.14■□□□□ 0.49
SSSCA1-206ENST00000531405 TP53TG5Q9Y2B4 290 aa18.14■□□□□ 0.49
SSSCA1-206ENST00000531405 MED13Q9UHV7 2174 aa18.13■□□□□ 0.49
SSSCA1-206ENST00000531405 TEX15Q9BXT5 2789 aa18.13■□□□□ 0.49
SSSCA1-206ENST00000531405 NBPF19A0A087WUL8 3843 aa18.13■□□□□ 0.49
SSSCA1-206ENST00000531405 PRR19A6NJB7 356 aa18.13■□□□□ 0.49
SSSCA1-206ENST00000531405 OR52A4PA6NMU1 304 aa18.13■□□□□ 0.49
SSSCA1-206ENST00000531405 K7EM74 188 aa18.13■□□□□ 0.49
SSSCA1-206ENST00000531405 KMOO15229 486 aa18.13■□□□□ 0.49
SSSCA1-206ENST00000531405 RASSF9O75901 435 aa18.13■□□□□ 0.49
SSSCA1-206ENST00000531405 KIAA0754O94854 1291 aa18.13■□□□□ 0.49
SSSCA1-206ENST00000531405 FURINP09958 794 aa18.13■□□□□ 0.49
SSSCA1-206ENST00000531405 BRAFP15056 766 aa18.13■□□□□ 0.49
SSSCA1-206ENST00000531405 DRG2P55039 364 aaKnown RBP18.13■□□□□ 0.49
SSSCA1-206ENST00000531405 UBASH3AP57075 661 aa18.13■□□□□ 0.49
SSSCA1-206ENST00000531405 C6orf15Q6UXA7 325 aaPredicted RBP18.13■□□□□ 0.49
SSSCA1-206ENST00000531405 NPNTQ6UXI9 565 aa18.13■□□□□ 0.49
SSSCA1-206ENST00000531405 LRRTM4Q86VH4 590 aa18.13■□□□□ 0.49
SSSCA1-206ENST00000531405 RASGRP3Q8IV61 690 aa18.13■□□□□ 0.49
SSSCA1-206ENST00000531405 ZNF547Q8IVP9 402 aa18.13■□□□□ 0.49
SSSCA1-206ENST00000531405 IMP4Q96G21 291 aaKnown RBP18.13■□□□□ 0.49
SSSCA1-206ENST00000531405 GPR63Q9BZJ6 419 aa18.13■□□□□ 0.49
SSSCA1-206ENST00000531405 ZNF768Q9H5H4 540 aaKnown RBP18.13■□□□□ 0.49
SSSCA1-206ENST00000531405 CBX8Q9HC52 389 aa18.13■□□□□ 0.49
SSSCA1-206ENST00000531405 UVRAGQ9P2Y5 699 aa18.13■□□□□ 0.49
SSSCA1-206ENST00000531405 TRIM10Q9UDY6 481 aa18.13■□□□□ 0.49
SSSCA1-206ENST00000531405 LUC7L2Q9Y383 392 aaKnown RBP18.13■□□□□ 0.49
SSSCA1-206ENST00000531405 KCNMB2Q9Y691 235 aa18.13■□□□□ 0.49
SSSCA1-206ENST00000531405 RP1L1Q8IWN7 2480 aaPredicted RBP18.13■□□□□ 0.49
SSSCA1-206ENST00000531405 LRRD1A4D1F6 860 aa18.12■□□□□ 0.49
SSSCA1-206ENST00000531405 GPR89AB7ZAQ6 455 aa18.12■□□□□ 0.49
SSSCA1-206ENST00000531405 AURKAO14965 403 aa18.12■□□□□ 0.49
SSSCA1-206ENST00000531405 GPR89BP0CG08 455 aa18.12■□□□□ 0.49
SSSCA1-206ENST00000531405 SPTBP11277 2137 aa18.12■□□□□ 0.49
SSSCA1-206ENST00000531405 BPIP17213 487 aa18.12■□□□□ 0.49
SSSCA1-206ENST00000531405 SEPT6Q14141 434 aa18.12■□□□□ 0.49
SSSCA1-206ENST00000531405 ERV3-1Q14264 604 aa18.12■□□□□ 0.49
SSSCA1-206ENST00000531405 GPR18Q14330 331 aa18.12■□□□□ 0.49
SSSCA1-206ENST00000531405 MESDQ14696 234 aa18.12■□□□□ 0.49
SSSCA1-206ENST00000531405 CRTC2Q53ET0 693 aaPredicted RBP18.12■□□□□ 0.49
SSSCA1-206ENST00000531405 FAM92BQ6ZTR7 304 aa18.12■□□□□ 0.49
SSSCA1-206ENST00000531405 TMEM135Q86UB9 458 aa18.12■□□□□ 0.49
SSSCA1-206ENST00000531405 NT5DC3Q86UY8 548 aa18.12■□□□□ 0.49
SSSCA1-206ENST00000531405 SPATA22Q8NHS9 363 aa18.12■□□□□ 0.49
SSSCA1-206ENST00000531405 CTNNBL1Q8WYA6 563 aaPredicted RBP18.12■□□□□ 0.49
SSSCA1-206ENST00000531405 STAMBPL1Q96FJ0 436 aa18.12■□□□□ 0.49
SSSCA1-206ENST00000531405 TIMM29Q9BSF4 260 aa18.12■□□□□ 0.49
SSSCA1-206ENST00000531405 MAGEE1Q9HCI5 957 aa18.12■□□□□ 0.49
SSSCA1-206ENST00000531405 NFKBIL1Q9UBC1 381 aaPredicted RBP18.12■□□□□ 0.49
SSSCA1-206ENST00000531405 TMPRSS11EQ9UL52 423 aa18.12■□□□□ 0.49
SSSCA1-206ENST00000531405 PLAAQ9Y263 795 aa18.12■□□□□ 0.49
SSSCA1-206ENST00000531405 KCTD3Q9Y597 815 aa18.12■□□□□ 0.49
SSSCA1-206ENST00000531405 SPO11Q9Y5K1 396 aa18.12■□□□□ 0.49
SSSCA1-206ENST00000531405 SPTBN1Q01082 2364 aaKnown RBP18.12■□□□□ 0.49
SSSCA1-206ENST00000531405 C3orf70A6NLC5 250 aaPredicted RBP18.11■□□□□ 0.49
SSSCA1-206ENST00000531405 KATNA1O75449 491 aa18.11■□□□□ 0.49
SSSCA1-206ENST00000531405 NDUFA10O95299 355 aa18.11■□□□□ 0.49
SSSCA1-206ENST00000531405 MT-CYBP00156 380 aaPredicted RBP18.11■□□□□ 0.49
SSSCA1-206ENST00000531405 H2AFZP0C0S5 128 aa18.11■□□□□ 0.49
SSSCA1-206ENST00000531405 CASP14P31944 242 aa18.11■□□□□ 0.49
SSSCA1-206ENST00000531405 CAPZBP47756 277 aa18.11■□□□□ 0.49
SSSCA1-206ENST00000531405 PPP1CAP62136 330 aa18.11■□□□□ 0.49
SSSCA1-206ENST00000531405 CDK18Q07002 472 aa18.11■□□□□ 0.49
SSSCA1-206ENST00000531405 PDPK2PQ6A1A2 396 aa18.11■□□□□ 0.49
SSSCA1-206ENST00000531405 H2AFVQ71UI9 128 aa18.11■□□□□ 0.49
SSSCA1-206ENST00000531405 BPIFA1Q9NP55 256 aa18.11■□□□□ 0.49
SSSCA1-206ENST00000531405 SLC40A1Q9NP59 571 aa18.11■□□□□ 0.49
SSSCA1-206ENST00000531405 RAD18Q9NS91 495 aa18.11■□□□□ 0.49
SSSCA1-206ENST00000531405 LNPEPQ9UIQ6 1025 aa18.11■□□□□ 0.49
SSSCA1-206ENST00000531405 PCDHB3Q9Y5E6 796 aa18.11■□□□□ 0.49
SSSCA1-206ENST00000531405 TOX3O15405 576 aaPredicted RBP18.1■□□□□ 0.49
SSSCA1-206ENST00000531405 CDK14O94921 469 aa18.1■□□□□ 0.49
SSSCA1-206ENST00000531405 IL11RAQ14626 422 aa18.1■□□□□ 0.49
SSSCA1-206ENST00000531405 ATP13A5Q4VNC0 1218 aa18.1■□□□□ 0.49
SSSCA1-206ENST00000531405 CACHD1Q5VU97 1274 aa18.1■□□□□ 0.49
SSSCA1-206ENST00000531405 SLC9A4Q6AI14 798 aa18.1■□□□□ 0.49
SSSCA1-206ENST00000531405 IRGCQ6NXR0 463 aa18.1■□□□□ 0.49
SSSCA1-206ENST00000531405 ABRAXAS1Q6UWZ7 409 aa18.1■□□□□ 0.49
SSSCA1-206ENST00000531405 C11orf96Q7Z7L8 435 aa18.1■□□□□ 0.49
SSSCA1-206ENST00000531405 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.1■□□□□ 0.49
SSSCA1-206ENST00000531405 TADA1Q96BN2 335 aa18.1■□□□□ 0.49
SSSCA1-206ENST00000531405 CXorf40BQ96DE9 158 aa18.1■□□□□ 0.49
SSSCA1-206ENST00000531405 OLFM3Q96PB7 478 aa18.1■□□□□ 0.49
SSSCA1-206ENST00000531405 SLC25A51Q9H1U9 297 aa18.1■□□□□ 0.49
SSSCA1-206ENST00000531405 POT1Q9NUX5 634 aa18.1■□□□□ 0.49
SSSCA1-206ENST00000531405 UBP1Q9NZI7 540 aa18.1■□□□□ 0.49
SSSCA1-206ENST00000531405 WDR37Q9Y2I8 494 aa18.1■□□□□ 0.49
SSSCA1-206ENST00000531405 ICE1Q9Y2F5 2266 aa18.09■□□□□ 0.49
SSSCA1-206ENST00000531405 SYCE3A1L190 88 aa18.09■□□□□ 0.49
SSSCA1-206ENST00000531405 CDC14CA4D256 554 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms