RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 CACNB4O00305 520 aaPredicted RBP18.82■□□□□ 0.6
SMPD1-205ENST00000531303 CDK14O94921 469 aa18.82■□□□□ 0.6
SMPD1-205ENST00000531303 SNRPAP09012 282 aaKnown RBP18.82■□□□□ 0.6
SMPD1-205ENST00000531303 ATP1B2P14415 290 aaPredicted RBP18.82■□□□□ 0.6
SMPD1-205ENST00000531303 PKMP14618 531 aaKnown RBP18.82■□□□□ 0.6
SMPD1-205ENST00000531303 TEAD1P28347 426 aa18.82■□□□□ 0.6
SMPD1-205ENST00000531303 NUDT1P36639 197 aa18.82■□□□□ 0.6
SMPD1-205ENST00000531303 DHPSP49366 369 aaPredicted RBP18.82■□□□□ 0.6
SMPD1-205ENST00000531303 CTSL3PQ5NE16 218 aa18.82■□□□□ 0.6
SMPD1-205ENST00000531303 HECTD2Q5U5R9 776 aa18.82■□□□□ 0.6
SMPD1-205ENST00000531303 Q6ZSR6 202 aa18.82■□□□□ 0.6
SMPD1-205ENST00000531303 KRT222Q8N1A0 295 aa18.82■□□□□ 0.6
SMPD1-205ENST00000531303 RIBC1Q8N443 379 aaPredicted RBP18.82■□□□□ 0.6
SMPD1-205ENST00000531303 AARSD1Q9BTE6 412 aaKnown RBP18.82■□□□□ 0.6
SMPD1-205ENST00000531303 DUSP15Q9H1R2 295 aaPredicted RBP18.82■□□□□ 0.6
SMPD1-205ENST00000531303 P2RY12Q9H244 342 aa18.82■□□□□ 0.6
SMPD1-205ENST00000531303 EURLQ9NYK6 297 aa18.82■□□□□ 0.6
SMPD1-205ENST00000531303 MOSPD1Q9UJG1 213 aa18.82■□□□□ 0.6
SMPD1-205ENST00000531303 GNPTGQ9UJJ9 305 aa18.82■□□□□ 0.6
SMPD1-205ENST00000531303 HS3ST3A1Q9Y663 406 aa18.82■□□□□ 0.6
SMPD1-205ENST00000531303 PRR33A8MZF0 331 aa18.81■□□□□ 0.6
SMPD1-205ENST00000531303 NIPSNAP2O75323 286 aa18.81■□□□□ 0.6
SMPD1-205ENST00000531303 RHOBTB1O94844 696 aa18.81■□□□□ 0.6
SMPD1-205ENST00000531303 TRIM16O95361 564 aa18.81■□□□□ 0.6
SMPD1-205ENST00000531303 MYCLP1P12525 358 aaPredicted RBP18.81■□□□□ 0.6
SMPD1-205ENST00000531303 ZNF8P17098 575 aaPredicted RBP18.81■□□□□ 0.6
SMPD1-205ENST00000531303 CDKN2DP55273 166 aa18.81■□□□□ 0.6
SMPD1-205ENST00000531303 GTF2H3Q13889 308 aa18.81■□□□□ 0.6
SMPD1-205ENST00000531303 USP10Q14694 798 aaKnown RBP18.81■□□□□ 0.6
SMPD1-205ENST00000531303 CROCCP2Q86T23 111 aa18.81■□□□□ 0.6
SMPD1-205ENST00000531303 GOLGA6L1Q8N7Z2 621 aa18.81■□□□□ 0.6
SMPD1-205ENST00000531303 KNL1Q8NG31 2342 aa18.81■□□□□ 0.6
SMPD1-205ENST00000531303 HEXDCQ8WVB3 486 aa18.81■□□□□ 0.6
SMPD1-205ENST00000531303 GPR22Q99680 433 aa18.81■□□□□ 0.6
SMPD1-205ENST00000531303 FAM126AQ9BYI3 521 aaPredicted RBP18.81■□□□□ 0.6
SMPD1-205ENST00000531303 ZCCHC2Q9C0B9 1178 aaKnown RBP18.81■□□□□ 0.6
SMPD1-205ENST00000531303 TMBIM4Q9HC24 238 aa18.81■□□□□ 0.6
SMPD1-205ENST00000531303 ZSCAN32Q9NX65 697 aa18.81■□□□□ 0.6
SMPD1-205ENST00000531303 LGALS13Q9UHV8 139 aa18.81■□□□□ 0.6
SMPD1-205ENST00000531303 VWA7Q9Y334 891 aa18.81■□□□□ 0.6
SMPD1-205ENST00000531303 A0A1W2PPM1 405 aa18.8■□□□□ 0.6
SMPD1-205ENST00000531303 A6NNZ2 444 aa18.8■□□□□ 0.6
SMPD1-205ENST00000531303 ATP8B1O43520 1251 aa18.8■□□□□ 0.6
SMPD1-205ENST00000531303 OPA1O60313 960 aa18.8■□□□□ 0.6
SMPD1-205ENST00000531303 ESR1P03372 595 aa18.8■□□□□ 0.6
SMPD1-205ENST00000531303 MT-ND3P03897 115 aa18.8■□□□□ 0.6
SMPD1-205ENST00000531303 CHRM3P20309 590 aa18.8■□□□□ 0.6
SMPD1-205ENST00000531303 RPS3P23396 243 aaKnown RBP eCLIP18.8■□□□□ 0.6
SMPD1-205ENST00000531303 CNTFP26441 200 aa18.8■□□□□ 0.6
SMPD1-205ENST00000531303 THOP1P52888 689 aa18.8■□□□□ 0.6
SMPD1-205ENST00000531303 CTSCP53634 463 aa18.8■□□□□ 0.6
SMPD1-205ENST00000531303 SLC12A2P55011 1212 aa18.8■□□□□ 0.6
SMPD1-205ENST00000531303 TAS2R39P59534 338 aa18.8■□□□□ 0.6
SMPD1-205ENST00000531303 TPRG1LQ5T0D9 272 aa18.8■□□□□ 0.6
SMPD1-205ENST00000531303 TMEM220Q6QAJ8 160 aa18.8■□□□□ 0.6
SMPD1-205ENST00000531303 CRTC3Q6UUV7 619 aa18.8■□□□□ 0.6
SMPD1-205ENST00000531303 ENPP7Q6UWV6 458 aa18.8■□□□□ 0.6
SMPD1-205ENST00000531303 LAYNQ6UX15 382 aa18.8■□□□□ 0.6
SMPD1-205ENST00000531303 CMC1Q7Z7K0 106 aa18.8■□□□□ 0.6
SMPD1-205ENST00000531303 BEND7Q8N7W2 519 aaPredicted RBP18.8■□□□□ 0.6
SMPD1-205ENST00000531303 OR13H1Q8NG92 308 aa18.8■□□□□ 0.6
SMPD1-205ENST00000531303 ARL8AQ96BM9 186 aa18.8■□□□□ 0.6
SMPD1-205ENST00000531303 OLFM1Q99784 485 aa18.8■□□□□ 0.6
SMPD1-205ENST00000531303 SARS2Q9NP81 518 aaKnown RBP18.8■□□□□ 0.6
SMPD1-205ENST00000531303 PRKAB1Q9Y478 270 aa18.8■□□□□ 0.6
SMPD1-205ENST00000531303 PCDHB1Q9Y5F3 818 aa18.8■□□□□ 0.6
SMPD1-205ENST00000531303 TMEM202A6NGA9 273 aa18.79■□□□□ 0.6
SMPD1-205ENST00000531303 E5RI56 91 aa18.79■□□□□ 0.6
SMPD1-205ENST00000531303 GOLGA8RI6L899 631 aa18.79■□□□□ 0.6
SMPD1-205ENST00000531303 ITPKAP23677 461 aa18.79■□□□□ 0.6
SMPD1-205ENST00000531303 PBLDP30039 288 aaPredicted RBP18.79■□□□□ 0.6
SMPD1-205ENST00000531303 PFN3P60673 137 aa18.79■□□□□ 0.6
SMPD1-205ENST00000531303 RASA2Q15283 850 aa18.79■□□□□ 0.6
SMPD1-205ENST00000531303 ZNF528Q3MIS6 628 aa18.79■□□□□ 0.6
SMPD1-205ENST00000531303 WDR45BQ5MNZ6 344 aa18.79■□□□□ 0.6
SMPD1-205ENST00000531303 KYAT3Q6YP21 454 aaKnown RBP18.79■□□□□ 0.6
SMPD1-205ENST00000531303 ABI3BPQ7Z7G0 1075 aa18.79■□□□□ 0.6
SMPD1-205ENST00000531303 PIM3Q86V86 326 aa18.79■□□□□ 0.6
SMPD1-205ENST00000531303 TRAPPC5Q8IUR0 188 aa18.79■□□□□ 0.6
SMPD1-205ENST00000531303 LKAAEAR1Q8TD35 194 aa18.79■□□□□ 0.6
SMPD1-205ENST00000531303 MTBPQ96DY7 904 aa18.79■□□□□ 0.6
SMPD1-205ENST00000531303 KLHDC7BQ96G42 594 aa18.79■□□□□ 0.6
SMPD1-205ENST00000531303 GALPQ9UBC7 116 aa18.79■□□□□ 0.6
SMPD1-205ENST00000531303 FAM8A1Q9UBU6 413 aa18.79■□□□□ 0.6
SMPD1-205ENST00000531303 CORO1CQ9ULV4 474 aaPredicted RBP18.79■□□□□ 0.6
SMPD1-205ENST00000531303 ATXN2Q99700 1313 aaKnown RBP18.79■□□□□ 0.6
SMPD1-205ENST00000531303 TPP1O14773 563 aa18.78■□□□□ 0.6
SMPD1-205ENST00000531303 SCAMP1O15126 338 aa18.78■□□□□ 0.6
SMPD1-205ENST00000531303 PHGDHO43175 533 aaKnown RBP18.78■□□□□ 0.6
SMPD1-205ENST00000531303 GALR2O43603 387 aaPredicted RBP18.78■□□□□ 0.6
SMPD1-205ENST00000531303 VEGFDO43915 354 aa18.78■□□□□ 0.6
SMPD1-205ENST00000531303 OR56A5P0C7T3 313 aa18.78■□□□□ 0.6
SMPD1-205ENST00000531303 TYK2P29597 1187 aa18.78■□□□□ 0.6
SMPD1-205ENST00000531303 GMPRP36959 345 aa18.78■□□□□ 0.6
SMPD1-205ENST00000531303 ADARP55265 1226 aaKnown RBP18.78■□□□□ 0.6
SMPD1-205ENST00000531303 POU4F1Q01851 419 aa18.78■□□□□ 0.6
SMPD1-205ENST00000531303 ZNF460Q14592 562 aa18.78■□□□□ 0.6
SMPD1-205ENST00000531303 NFATC4Q14934 902 aa18.78■□□□□ 0.6
SMPD1-205ENST00000531303 PLK5Q496M5 336 aa18.78■□□□□ 0.6
SMPD1-205ENST00000531303 LYSMD4Q5XG99 296 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms