RNA–Protein interactions for RNA: ENST00000531104.1

SRPRA-205, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-205ENST00000531104 COG4Q9H9E3 785 aa10.8□□□□□ -0.68
SRPRA-205ENST00000531104 ACSS2Q9NR19 701 aa10.8□□□□□ -0.68
SRPRA-205ENST00000531104 SUN2Q9UH99 717 aa10.8□□□□□ -0.68
SRPRA-205ENST00000531104 LNPEPQ9UIQ6 1025 aa10.8□□□□□ -0.68
SRPRA-205ENST00000531104 COL4A2P08572 1712 aa10.79□□□□□ -0.68
SRPRA-205ENST00000531104 TBC1D3BA6NDS4 549 aa10.79□□□□□ -0.68
SRPRA-205ENST00000531104 NPEPPSL1A6NEC2 478 aa10.79□□□□□ -0.68
SRPRA-205ENST00000531104 SYCE1LA8MT33 242 aa10.79□□□□□ -0.68
SRPRA-205ENST00000531104 E5RI56 91 aa10.79□□□□□ -0.68
SRPRA-205ENST00000531104 STX16-NPEPL1H3BU86 382 aa10.79□□□□□ -0.68
SRPRA-205ENST00000531104 UBXN8O00124 270 aa10.79□□□□□ -0.68
SRPRA-205ENST00000531104 EIF3FO00303 357 aaPredicted RBP10.79□□□□□ -0.68
SRPRA-205ENST00000531104 STX16O14662 325 aa10.79□□□□□ -0.68
SRPRA-205ENST00000531104 HDAC3O15379 428 aa10.79□□□□□ -0.68
SRPRA-205ENST00000531104 SLC25A14O95258 325 aaPredicted RBP10.79□□□□□ -0.68
SRPRA-205ENST00000531104 RPS17P08708 135 aaKnown RBP10.79□□□□□ -0.68
SRPRA-205ENST00000531104 IL12RB1P42701 662 aa10.79□□□□□ -0.68
SRPRA-205ENST00000531104 HK3P52790 923 aa10.79□□□□□ -0.68
SRPRA-205ENST00000531104 METAP1P53582 386 aa10.79□□□□□ -0.68
SRPRA-205ENST00000531104 NAA20P61599 178 aa10.79□□□□□ -0.68
SRPRA-205ENST00000531104 HTR4Q13639 388 aa10.79□□□□□ -0.68
SRPRA-205ENST00000531104 TSNQ15631 228 aaKnown RBP10.79□□□□□ -0.68
SRPRA-205ENST00000531104 TMEM52BQ4KMG9 183 aa10.79□□□□□ -0.68
SRPRA-205ENST00000531104 METTL21CQ5VZV1 264 aa10.79□□□□□ -0.68
SRPRA-205ENST00000531104 ERAP2Q6P179 960 aa10.79□□□□□ -0.68
SRPRA-205ENST00000531104 CYHR1Q6ZMK1 362 aa10.79□□□□□ -0.68
SRPRA-205ENST00000531104 ZNF765Q7L2R6 523 aa10.79□□□□□ -0.68
SRPRA-205ENST00000531104 CYP2U1Q7Z449 544 aa10.79□□□□□ -0.68
SRPRA-205ENST00000531104 SUGP1Q8IWZ8 645 aaKnown RBP10.79□□□□□ -0.68
SRPRA-205ENST00000531104 KIRREL3Q8IZU9 778 aa10.79□□□□□ -0.68
SRPRA-205ENST00000531104 CCNYL1Q8N7R7 359 aa10.79□□□□□ -0.68
SRPRA-205ENST00000531104 PTGR2Q8N8N7 351 aaPredicted RBP10.79□□□□□ -0.68
SRPRA-205ENST00000531104 SMRP1Q8NCR6 262 aa10.79□□□□□ -0.68
SRPRA-205ENST00000531104 FAM136AQ96C01 138 aa10.79□□□□□ -0.68
SRPRA-205ENST00000531104 SLC7A6OSQ96CW6 309 aaPredicted RBP10.79□□□□□ -0.68
SRPRA-205ENST00000531104 MAELQ96JY0 434 aaKnown RBP10.79□□□□□ -0.68
SRPRA-205ENST00000531104 NECTIN4Q96NY8 510 aa10.79□□□□□ -0.68
SRPRA-205ENST00000531104 VPS35Q96QK1 796 aa10.79□□□□□ -0.68
SRPRA-205ENST00000531104 COPS8Q99627 209 aa10.79□□□□□ -0.68
SRPRA-205ENST00000531104 ABCG8Q9H221 673 aa10.79□□□□□ -0.68
SRPRA-205ENST00000531104 EML4Q9HC35 981 aaKnown RBP10.79□□□□□ -0.68
SRPRA-205ENST00000531104 CYP4F12Q9HCS2 524 aa10.79□□□□□ -0.68
SRPRA-205ENST00000531104 PRSS16Q9NQE7 514 aa10.79□□□□□ -0.68
SRPRA-205ENST00000531104 ARHGEF3Q9NR81 526 aa10.79□□□□□ -0.68
SRPRA-205ENST00000531104 TXLNGQ9NUQ3 528 aa10.79□□□□□ -0.68
SRPRA-205ENST00000531104 ARL8BQ9NVJ2 186 aa10.79□□□□□ -0.68
SRPRA-205ENST00000531104 BPTFQ12830 3046 aa10.78□□□□□ -0.68
SRPRA-205ENST00000531104 TMEM265A0A087WTH1 108 aa10.78□□□□□ -0.68
SRPRA-205ENST00000531104 ANTXRLA6NF34 631 aa10.78□□□□□ -0.68
SRPRA-205ENST00000531104 CFAP73A6NFT4 308 aa10.78□□□□□ -0.68
SRPRA-205ENST00000531104 BTN3A1O00481 513 aa10.78□□□□□ -0.68
SRPRA-205ENST00000531104 UBFD1O14562 309 aaKnown RBP10.78□□□□□ -0.68
SRPRA-205ENST00000531104 HGSO14964 777 aaPredicted RBP10.78□□□□□ -0.68
SRPRA-205ENST00000531104 NPC1O15118 1278 aa10.78□□□□□ -0.68
SRPRA-205ENST00000531104 SGTAO43765 313 aa10.78□□□□□ -0.68
SRPRA-205ENST00000531104 HNRNPCL1O60812 293 aaKnown RBP10.78□□□□□ -0.68
SRPRA-205ENST00000531104 AP2A2O94973 939 aa10.78□□□□□ -0.68
SRPRA-205ENST00000531104 APODP05090 189 aa10.78□□□□□ -0.68
SRPRA-205ENST00000531104 CBSLP0DN79 551 aa10.78□□□□□ -0.68
SRPRA-205ENST00000531104 XPAP23025 273 aaPredicted RBP10.78□□□□□ -0.68
SRPRA-205ENST00000531104 CBSP35520 551 aa10.78□□□□□ -0.68
SRPRA-205ENST00000531104 ETV3P41162 512 aa10.78□□□□□ -0.68
SRPRA-205ENST00000531104 MAGEA9P43362 315 aa10.78□□□□□ -0.68
SRPRA-205ENST00000531104 TNFRSF4P43489 277 aa10.78□□□□□ -0.68
SRPRA-205ENST00000531104 LIG3P49916 1009 aa10.78□□□□□ -0.68
SRPRA-205ENST00000531104 ZBTB16Q05516 673 aa10.78□□□□□ -0.68
SRPRA-205ENST00000531104 ELP6Q0PNE2 266 aa10.78□□□□□ -0.68
SRPRA-205ENST00000531104 TBCCQ15814 346 aa10.78□□□□□ -0.68
SRPRA-205ENST00000531104 SLC9B1Q4ZJI4 515 aa10.78□□□□□ -0.68
SRPRA-205ENST00000531104 CFAP157Q5JU67 520 aa10.78□□□□□ -0.68
SRPRA-205ENST00000531104 VWA5B1Q5TIE3 1220 aa10.78□□□□□ -0.68
SRPRA-205ENST00000531104 EGFLAMQ63HQ2 1017 aa10.78□□□□□ -0.68
SRPRA-205ENST00000531104 SEL1L3Q68CR1 1132 aa10.78□□□□□ -0.68
SRPRA-205ENST00000531104 TXNDC11Q6PKC3 985 aa10.78□□□□□ -0.68
SRPRA-205ENST00000531104 SBSNQ6UWP8 590 aa10.78□□□□□ -0.68
SRPRA-205ENST00000531104 Q6ZVL8 140 aa10.78□□□□□ -0.68
SRPRA-205ENST00000531104 NLRP8Q86W28 1048 aa10.78□□□□□ -0.68
SRPRA-205ENST00000531104 ZBTB2Q8N680 514 aa10.78□□□□□ -0.68
SRPRA-205ENST00000531104 CLDN19Q8N6F1 224 aa10.78□□□□□ -0.68
SRPRA-205ENST00000531104 DDHD1Q8NEL9 900 aa10.78□□□□□ -0.68
SRPRA-205ENST00000531104 ZNF483Q8TF39 744 aaPredicted RBP10.78□□□□□ -0.68
SRPRA-205ENST00000531104 PHF21BQ96EK2 531 aa10.78□□□□□ -0.68
SRPRA-205ENST00000531104 FAR2Q96K12 515 aa10.78□□□□□ -0.68
SRPRA-205ENST00000531104 ASB2Q96Q27 587 aa10.78□□□□□ -0.68
SRPRA-205ENST00000531104 ACOX2Q99424 681 aa10.78□□□□□ -0.68
SRPRA-205ENST00000531104 ZSCAN5AQ9BUG6 496 aa10.78□□□□□ -0.68
SRPRA-205ENST00000531104 CCDC28BQ9BUN5 200 aa10.78□□□□□ -0.68
SRPRA-205ENST00000531104 SPATA16Q9BXB7 569 aa10.78□□□□□ -0.68
SRPRA-205ENST00000531104 HDAC8Q9BY41 377 aa10.78□□□□□ -0.68
SRPRA-205ENST00000531104 LRMDAQ9H2I8 198 aa10.78□□□□□ -0.68
SRPRA-205ENST00000531104 FBRSL1Q9HCM7 1045 aaKnown RBP10.78□□□□□ -0.68
SRPRA-205ENST00000531104 TNFRSF12AQ9NP84 129 aa10.78□□□□□ -0.68
SRPRA-205ENST00000531104 SPATS2LQ9NUQ6 558 aaKnown RBP10.78□□□□□ -0.68
SRPRA-205ENST00000531104 KCTD5Q9NXV2 234 aa10.78□□□□□ -0.68
SRPRA-205ENST00000531104 CLDND1Q9NY35 253 aa10.78□□□□□ -0.68
SRPRA-205ENST00000531104 NUDT4Q9NZJ9 180 aa10.78□□□□□ -0.68
SRPRA-205ENST00000531104 RNF112Q9ULX5 631 aa10.78□□□□□ -0.68
SRPRA-205ENST00000531104 TCF20Q9UGU0 1960 aaKnown RBP10.77□□□□□ -0.68
SRPRA-205ENST00000531104 TRANK1O15050 2925 aa10.77□□□□□ -0.69
SRPRA-205ENST00000531104 FADS2P1A8MWK0 482 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms