RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 KHDC1Q4VXA5 237 aaKnown RBP11.89□□□□□ -0.51
COPB1-206ENST00000529210 LDLRAP1Q5SW96 308 aa11.89□□□□□ -0.51
COPB1-206ENST00000529210 CCDC181Q5TID7 509 aa11.89□□□□□ -0.51
COPB1-206ENST00000529210 AGAP9Q5VTM2 703 aa11.89□□□□□ -0.51
COPB1-206ENST00000529210 ALS2CLQ60I27 953 aa11.89□□□□□ -0.51
COPB1-206ENST00000529210 INO80CQ6PI98 192 aaPredicted RBP11.89□□□□□ -0.51
COPB1-206ENST00000529210 ABRAXAS1Q6UWZ7 409 aa11.89□□□□□ -0.51
COPB1-206ENST00000529210 PEX26Q7Z412 305 aa11.89□□□□□ -0.51
COPB1-206ENST00000529210 GLT6D1Q7Z4J2 308 aa11.89□□□□□ -0.51
COPB1-206ENST00000529210 KIAA1328Q86T90 577 aa11.89□□□□□ -0.51
COPB1-206ENST00000529210 DTX1Q86Y01 620 aa11.89□□□□□ -0.51
COPB1-206ENST00000529210 UBL4BQ8N7F7 174 aa11.89□□□□□ -0.51
COPB1-206ENST00000529210 IPMKQ8NFU5 416 aa11.89□□□□□ -0.51
COPB1-206ENST00000529210 OR10G6Q8NH81 332 aa11.89□□□□□ -0.51
COPB1-206ENST00000529210 WBP1Q96G27 269 aa11.89□□□□□ -0.51
COPB1-206ENST00000529210 HES6Q96HZ4 224 aa11.89□□□□□ -0.51
COPB1-206ENST00000529210 BBC3Q96PG8 261 aaPredicted RBP11.89□□□□□ -0.51
COPB1-206ENST00000529210 SLC38A3Q99624 504 aa11.89□□□□□ -0.51
COPB1-206ENST00000529210 FSD1LQ9BXM9 530 aa11.89□□□□□ -0.51
COPB1-206ENST00000529210 KCNK4Q9NYG8 393 aa11.89□□□□□ -0.51
COPB1-206ENST00000529210 PISDQ9UG56 409 aa11.89□□□□□ -0.51
COPB1-206ENST00000529210 SLC23A2Q9UGH3 650 aa11.89□□□□□ -0.51
COPB1-206ENST00000529210 FEZ2Q9UHY8 353 aaPredicted RBP11.89□□□□□ -0.51
COPB1-206ENST00000529210 PRKAB1Q9Y478 270 aa11.89□□□□□ -0.51
COPB1-206ENST00000529210 DNMT3AQ9Y6K1 912 aaPredicted RBP11.89□□□□□ -0.51
COPB1-206ENST00000529210 ATRXP46100 2492 aa11.88□□□□□ -0.51
COPB1-206ENST00000529210 B4E171 279 aa11.88□□□□□ -0.51
COPB1-206ENST00000529210 ATXN7O15265 892 aaPredicted RBP11.88□□□□□ -0.51
COPB1-206ENST00000529210 STK10O94804 968 aaKnown RBP11.88□□□□□ -0.51
COPB1-206ENST00000529210 LIPCP11150 499 aa11.88□□□□□ -0.51
COPB1-206ENST00000529210 HGFP14210 728 aa11.88□□□□□ -0.51
COPB1-206ENST00000529210 HOXB3P14651 431 aaPredicted RBP11.88□□□□□ -0.51
COPB1-206ENST00000529210 ITIH1P19827 911 aa11.88□□□□□ -0.51
COPB1-206ENST00000529210 ETV5P41161 510 aa11.88□□□□□ -0.51
COPB1-206ENST00000529210 TSPAN7P41732 249 aa11.88□□□□□ -0.51
COPB1-206ENST00000529210 RHDQ02161 417 aa11.88□□□□□ -0.51
COPB1-206ENST00000529210 VAC14Q08AM6 782 aa11.88□□□□□ -0.51
COPB1-206ENST00000529210 TMEM115Q12893 351 aaPredicted RBP11.88□□□□□ -0.51
COPB1-206ENST00000529210 TAF1AQ15573 450 aaPredicted RBP11.88□□□□□ -0.51
COPB1-206ENST00000529210 PHF19Q5T6S3 580 aa11.88□□□□□ -0.51
COPB1-206ENST00000529210 KCTD11Q693B1 232 aa11.88□□□□□ -0.51
COPB1-206ENST00000529210 FOXR1Q6PIV2 292 aa11.88□□□□□ -0.51
COPB1-206ENST00000529210 USP53Q70EK8 1073 aa11.88□□□□□ -0.51
COPB1-206ENST00000529210 ARHGAP22Q7Z5H3 698 aa11.88□□□□□ -0.51
COPB1-206ENST00000529210 RBM12BQ8IXT5 1001 aaKnown RBP11.88□□□□□ -0.51
COPB1-206ENST00000529210 AGBL5Q8NDL9 886 aa11.88□□□□□ -0.51
COPB1-206ENST00000529210 BLOC1S5Q8TDH9 187 aa11.88□□□□□ -0.51
COPB1-206ENST00000529210 CCDC74BQ96LY2 380 aa11.88□□□□□ -0.51
COPB1-206ENST00000529210 ZCCHC2Q9C0B9 1178 aaKnown RBP11.88□□□□□ -0.51
COPB1-206ENST00000529210 BPIFA1Q9NP55 256 aa11.88□□□□□ -0.51
COPB1-206ENST00000529210 KLC4Q9NSK0 619 aa11.88□□□□□ -0.51
COPB1-206ENST00000529210 CPNE7Q9UBL6 633 aa11.88□□□□□ -0.51
COPB1-206ENST00000529210 PKP3Q9Y446 797 aa11.88□□□□□ -0.51
COPB1-206ENST00000529210 KALRNO60229 2985 aa11.88□□□□□ -0.51
COPB1-206ENST00000529210 GLYATL1P3A0A0U1RQE8 302 aa11.87□□□□□ -0.51
COPB1-206ENST00000529210 KLHL33A6NCF5 533 aa11.87□□□□□ -0.51
COPB1-206ENST00000529210 GOLGA6L9A6NEM1 432 aa11.87□□□□□ -0.51
COPB1-206ENST00000529210 C9orf172C9J069 976 aa11.87□□□□□ -0.51
COPB1-206ENST00000529210 ERVH48-1M5A8F1 160 aa11.87□□□□□ -0.51
COPB1-206ENST00000529210 KCNN4O15554 427 aa11.87□□□□□ -0.51
COPB1-206ENST00000529210 AGTP01019 485 aa11.87□□□□□ -0.51
COPB1-206ENST00000529210 SLC4A1P02730 911 aa11.87□□□□□ -0.51
COPB1-206ENST00000529210 LPOP22079 712 aaPredicted RBP11.87□□□□□ -0.51
COPB1-206ENST00000529210 PSMB4P28070 264 aa11.87□□□□□ -0.51
COPB1-206ENST00000529210 CXADRP78310 365 aa11.87□□□□□ -0.51
COPB1-206ENST00000529210 PDE1BQ01064 536 aa11.87□□□□□ -0.51
COPB1-206ENST00000529210 PRPSAP1Q14558 356 aa11.87□□□□□ -0.51
COPB1-206ENST00000529210 CHRNA6Q15825 494 aa11.87□□□□□ -0.51
COPB1-206ENST00000529210 INSCQ1MX18 579 aa11.87□□□□□ -0.51
COPB1-206ENST00000529210 ZNF648Q5T619 568 aaPredicted RBP11.87□□□□□ -0.51
COPB1-206ENST00000529210 NKAIN2Q5VXU1 208 aa11.87□□□□□ -0.51
COPB1-206ENST00000529210 DENND5AQ6IQ26 1287 aa11.87□□□□□ -0.51
COPB1-206ENST00000529210 AADACL2Q6P093 401 aa11.87□□□□□ -0.51
COPB1-206ENST00000529210 DARS2Q6PI48 645 aaKnown RBP11.87□□□□□ -0.51
COPB1-206ENST00000529210 SLC25A41Q8N5S1 370 aa11.87□□□□□ -0.51
COPB1-206ENST00000529210 BMPERQ8N8U9 685 aa11.87□□□□□ -0.51
COPB1-206ENST00000529210 SLC35B2Q8TB61 432 aa11.87□□□□□ -0.51
COPB1-206ENST00000529210 RTP4Q96DX8 246 aa11.87□□□□□ -0.51
COPB1-206ENST00000529210 NAF1Q96HR8 494 aaKnown RBP11.87□□□□□ -0.51
COPB1-206ENST00000529210 ZNF514Q96K75 400 aaPredicted RBP11.87□□□□□ -0.51
COPB1-206ENST00000529210 TAAR9Q96RI9 348 aa11.87□□□□□ -0.51
COPB1-206ENST00000529210 CCNL2Q96S94 520 aaPredicted RBP11.87□□□□□ -0.51
COPB1-206ENST00000529210 DDA1Q9BW61 102 aa11.87□□□□□ -0.51
COPB1-206ENST00000529210 C10orf88Q9H8K7 445 aa11.87□□□□□ -0.51
COPB1-206ENST00000529210 ARFGAP3Q9NP61 516 aa11.87□□□□□ -0.51
COPB1-206ENST00000529210 PRDM8Q9NQV8 689 aa11.87□□□□□ -0.51
COPB1-206ENST00000529210 POT1Q9NUX5 634 aa11.87□□□□□ -0.51
COPB1-206ENST00000529210 MN1Q10571 1320 aaPredicted RBP11.86□□□□□ -0.51
COPB1-206ENST00000529210 PRAMEF33A0A0G2JMD5 474 aa11.86□□□□□ -0.51
COPB1-206ENST00000529210 A0A0U1RQJ8 604 aa11.86□□□□□ -0.51
COPB1-206ENST00000529210 MACROD2A1Z1Q3 448 aa11.86□□□□□ -0.51
COPB1-206ENST00000529210 C2orf81A6NN90 581 aa11.86□□□□□ -0.51
COPB1-206ENST00000529210 H7C0S8 307 aa11.86□□□□□ -0.51
COPB1-206ENST00000529210 STX7O15400 261 aaKnown RBP11.86□□□□□ -0.51
COPB1-206ENST00000529210 PRAMEF10O60809 474 aa11.86□□□□□ -0.51
COPB1-206ENST00000529210 MTX2O75431 263 aa11.86□□□□□ -0.51
COPB1-206ENST00000529210 C9P02748 559 aa11.86□□□□□ -0.51
COPB1-206ENST00000529210 ANKRD34CP0C6C1 535 aa11.86□□□□□ -0.51
COPB1-206ENST00000529210 FGF3P11487 239 aaPredicted RBP11.86□□□□□ -0.51
COPB1-206ENST00000529210 BRAFP15056 766 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms